Protein–RNA interactions for Protein: P49427

CDC34, Ubiquitin-conjugating enzyme E2 R1, humanhuman

Predicted RBP Predictions only

Length 236 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC34P49427 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
CDC34P49427 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
CDC34P49427 MIR3621-201ENST00000580529 85 ntBASIC15.83■□□□□ 0.12
CDC34P49427 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC15.83■□□□□ 0.12
CDC34P49427 MIR2861-201ENST00000636310 90 ntBASIC15.83■□□□□ 0.12
CDC34P49427 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CDC34P49427 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC15.83■□□□□ 0.12
CDC34P49427 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
CDC34P49427 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CDC34P49427 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CDC34P49427 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC15.83■□□□□ 0.12
CDC34P49427 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CDC34P49427 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
CDC34P49427 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC15.83■□□□□ 0.12
CDC34P49427 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CDC34P49427 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC15.82■□□□□ 0.12
CDC34P49427 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC15.82■□□□□ 0.12
CDC34P49427 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CDC34P49427 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CDC34P49427 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC15.82■□□□□ 0.12
CDC34P49427 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CDC34P49427 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CDC34P49427 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CDC34P49427 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CDC34P49427 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CDC34P49427 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
CDC34P49427 SNX3-202ENST00000349379 890 ntTSL 2 BASIC15.82■□□□□ 0.12
CDC34P49427 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CDC34P49427 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC15.82■□□□□ 0.12
CDC34P49427 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CDC34P49427 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC15.82■□□□□ 0.12
CDC34P49427 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CDC34P49427 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CDC34P49427 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
CDC34P49427 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CDC34P49427 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CDC34P49427 AC061975.6-201ENST00000579045 1553 ntBASIC15.82■□□□□ 0.12
CDC34P49427 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC15.82■□□□□ 0.12
CDC34P49427 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CDC34P49427 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC15.82■□□□□ 0.12
CDC34P49427 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CDC34P49427 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC15.82■□□□□ 0.12
CDC34P49427 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC15.82■□□□□ 0.12
CDC34P49427 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CDC34P49427 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC15.81■□□□□ 0.12
CDC34P49427 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC15.81■□□□□ 0.12
CDC34P49427 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
CDC34P49427 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CDC34P49427 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CDC34P49427 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CDC34P49427 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
CDC34P49427 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
CDC34P49427 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
CDC34P49427 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CDC34P49427 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CDC34P49427 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC15.81■□□□□ 0.12
CDC34P49427 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC15.81■□□□□ 0.12
CDC34P49427 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC15.81■□□□□ 0.12
CDC34P49427 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC15.81■□□□□ 0.12
CDC34P49427 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC15.81■□□□□ 0.12
CDC34P49427 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC15.81■□□□□ 0.12
CDC34P49427 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CDC34P49427 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CDC34P49427 AL691432.2-201ENST00000607222 2038 ntBASIC15.81■□□□□ 0.12
CDC34P49427 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
CDC34P49427 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC15.81■□□□□ 0.12
CDC34P49427 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
CDC34P49427 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
CDC34P49427 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CDC34P49427 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CDC34P49427 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
CDC34P49427 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CDC34P49427 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC15.8■□□□□ 0.12
CDC34P49427 AC093503.3-201ENST00000624917 2352 ntBASIC15.8■□□□□ 0.12
CDC34P49427 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
CDC34P49427 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CDC34P49427 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CDC34P49427 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CDC34P49427 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
CDC34P49427 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
CDC34P49427 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC15.8■□□□□ 0.12
CDC34P49427 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
CDC34P49427 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC15.8■□□□□ 0.12
CDC34P49427 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CDC34P49427 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC15.8■□□□□ 0.12
CDC34P49427 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CDC34P49427 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
CDC34P49427 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
CDC34P49427 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
CDC34P49427 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC15.8■□□□□ 0.12
CDC34P49427 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC15.8■□□□□ 0.12
CDC34P49427 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC15.8■□□□□ 0.12
CDC34P49427 BCL2-203ENST00000589955 5011 ntBASIC15.8■□□□□ 0.12
CDC34P49427 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
CDC34P49427 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC15.8■□□□□ 0.12
CDC34P49427 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CDC34P49427 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CDC34P49427 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
CDC34P49427 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
CDC34P49427 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms