Protein–RNA interactions for Protein: P48559

YPT11, GTP-binding protein YPT11, yeastyeast

Predictions only

Length 417 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
YPT11P48559 YJL120WYJL120W 324 nt1.73□□□□□ -2.13
YPT11P48559 YOR108C-AYOR108C-A 210 nt1.73□□□□□ -2.13
YPT11P48559 PET309YLR067C 2898 nt1.73□□□□□ -2.13
YPT11P48559 UBR2YLR024C 5619 nt1.72□□□□□ -2.13
YPT11P48559 MLH3YPL164C 2148 nt1.72□□□□□ -2.13
YPT11P48559 CAT8YMR280C 4302 nt1.72□□□□□ -2.13
YPT11P48559 MAD1YGL086W 2250 nt1.72□□□□□ -2.13
YPT11P48559 YNL097C-BYNL097C-B 123 nt1.72□□□□□ -2.13
YPT11P48559 NOC3YLR002C 1992 nt1.72□□□□□ -2.13
YPT11P48559 YHR210CYHR210C 1026 nt1.71□□□□□ -2.14
YPT11P48559 RPS25BYLR333C 327 nt1.71□□□□□ -2.14
YPT11P48559 YBR174CYBR174C 315 nt1.71□□□□□ -2.14
YPT11P48559 ADR1YDR216W 3972 nt1.71□□□□□ -2.14
YPT11P48559 MCM10YIL150C 1716 nt1.71□□□□□ -2.14
YPT11P48559 RPL31AYDL075W 342 nt1.7□□□□□ -2.14
YPT11P48559 YLR140WYLR140W 327 nt1.7□□□□□ -2.14
YPT11P48559 YNL338WYNL338W 159 nt1.7□□□□□ -2.14
YPT11P48559 CTR9YOL145C 3234 nt1.7□□□□□ -2.14
YPT11P48559 YNL144CYNL144C 2223 nt1.7□□□□□ -2.14
YPT11P48559 HIR3YJR140C 4947 nt1.7□□□□□ -2.14
YPT11P48559 YLR342W-AYLR342W-A 174 nt1.69□□□□□ -2.14
YPT11P48559 YBR131C-AYBR131C-A 90 nt1.69□□□□□ -2.14
YPT11P48559 PIG1YLR273C 1947 nt1.69□□□□□ -2.14
YPT11P48559 PRP39YML046W 1890 nt1.69□□□□□ -2.14
YPT11P48559 YGL217CYGL217C 342 nt1.68□□□□□ -2.14
YPT11P48559 YBL008W-AYBL008W-A 240 nt1.68□□□□□ -2.14
YPT11P48559 DGR2YKL121W 2559 nt1.68□□□□□ -2.14
YPT11P48559 HSL1YKL101W 4557 nt1.68□□□□□ -2.14
YPT11P48559 TRS65YGR166W 1683 nt1.67□□□□□ -2.14
YPT11P48559 HMI1YOL095C 2121 nt1.67□□□□□ -2.14
YPT11P48559 YLR035C-AYLR035C-A 3468 nt1.67□□□□□ -2.14
YPT11P48559 Q0092Q0092 141 nt1.67□□□□□ -2.14
YPT11P48559 ECM12YHR021W-A 456 nt1.67□□□□□ -2.14
YPT11P48559 IRE1YHR079C 3348 nt1.66□□□□□ -2.14
YPT11P48559 YIR044CYIR044C 186 nt1.66□□□□□ -2.14
YPT11P48559 PKH3YDR466W 2697 nt1.66□□□□□ -2.14
YPT11P48559 BPH1YCR032W 6504 nt1.66□□□□□ -2.14
YPT11P48559 TDA9YML081W 3756 nt1.65□□□□□ -2.14
YPT11P48559 tQ(UUG)E2tQ(UUG)E2 72 nt1.65□□□□□ -2.15
YPT11P48559 tT(UGU)HtT(UGU)H 72 nt1.65□□□□□ -2.15
YPT11P48559 MSH6YDR097C 3729 nt1.65□□□□□ -2.15
YPT11P48559 YLL007CYLL007C 1998 nt1.65□□□□□ -2.15
YPT11P48559 TBS1YBR150C 3285 nt1.64□□□□□ -2.15
YPT11P48559 PAU3YCR104W 375 nt1.64□□□□□ -2.15
YPT11P48559 COF1YLL050C 432 nt1.64□□□□□ -2.15
YPT11P48559 YOR072W-BYOR072W-B 162 nt1.64□□□□□ -2.15
YPT11P48559 snR46snR46 197 nt1.64□□□□□ -2.15
YPT11P48559 LHS1YKL073W 2646 nt1.64□□□□□ -2.15
YPT11P48559 ULI1YFR026C 510 nt1.63□□□□□ -2.15
YPT11P48559 YMR175W-AYMR175W-A 195 nt1.63□□□□□ -2.15
YPT11P48559 CUL3YGR003W 2235 nt1.63□□□□□ -2.15
YPT11P48559 PTP2YOR208W 2253 nt1.63□□□□□ -2.15
YPT11P48559 YMR247W-AYMR247W-A 144 nt1.62□□□□□ -2.15
YPT11P48559 FRK1YPL141C 2598 nt1.62□□□□□ -2.15
YPT11P48559 SEY1YOR165W 2331 nt1.62□□□□□ -2.15
YPT11P48559 CCH1YGR217W 6120 nt1.61□□□□□ -2.15
YPT11P48559 YDR521WYDR521W 336 nt1.61□□□□□ -2.15
YPT11P48559 SEC63YOR254C 1992 nt1.61□□□□□ -2.15
YPT11P48559 YJR039WYJR039W 3366 nt1.61□□□□□ -2.15
YPT11P48559 YDL007C-AYDL007C-A 258 nt1.6□□□□□ -2.15
YPT11P48559 YLL019W-AYLL019W-A 93 nt1.6□□□□□ -2.15
YPT11P48559 YOR345CYOR345C 351 nt1.6□□□□□ -2.15
YPT11P48559 SFB2YNL049C 2631 nt1.6□□□□□ -2.15
YPT11P48559 ALK1YGL021W 2283 nt1.6□□□□□ -2.15
YPT11P48559 AHC1YOR023C 1701 nt1.6□□□□□ -2.15
YPT11P48559 snR52snR52 92 nt1.59□□□□□ -2.15
YPT11P48559 KIP1YBL063W 3336 nt1.58□□□□□ -2.16
YPT11P48559 YDL196WYDL196W 330 nt1.58□□□□□ -2.16
YPT11P48559 YBR206WYBR206W 324 nt1.58□□□□□ -2.16
YPT11P48559 PIP2YOR363C 2991 nt1.58□□□□□ -2.16
YPT11P48559 COG4YPR105C 2586 nt1.57□□□□□ -2.16
YPT11P48559 MYO4YAL029C 4416 nt1.57□□□□□ -2.16
YPT11P48559 ATP8Q0080 147 nt1.57□□□□□ -2.16
YPT11P48559 RPL33BYOR234C 324 nt1.57□□□□□ -2.16
YPT11P48559 IFH1YLR223C 3258 nt1.57□□□□□ -2.16
YPT11P48559 LAA1YJL207C 6045 nt1.57□□□□□ -2.16
YPT11P48559 NUP192YJL039C 5052 nt1.57□□□□□ -2.16
YPT11P48559 SLI15YBR156C 2097 nt1.57□□□□□ -2.16
YPT11P48559 YLR419WYLR419W 4308 nt1.57□□□□□ -2.16
YPT11P48559 PKH2YOL100W 3246 nt1.56□□□□□ -2.16
YPT11P48559 NCA2YPR155C 1851 nt1.56□□□□□ -2.16
YPT11P48559 SBE22YHR103W 2559 nt1.55□□□□□ -2.16
YPT11P48559 YOR093CYOR093C 4947 nt1.55□□□□□ -2.16
YPT11P48559 DNF3YMR162C 4971 nt1.55□□□□□ -2.16
YPT11P48559 AIM44YPL158C 2277 nt1.55□□□□□ -2.16
YPT11P48559 PBY1YBR094W 2262 nt1.55□□□□□ -2.16
YPT11P48559 PET127YOR017W 2403 nt1.55□□□□□ -2.16
YPT11P48559 CDC31YOR257W 486 nt1.55□□□□□ -2.16
YPT11P48559 FIG4YNL325C 2640 nt1.55□□□□□ -2.16
YPT11P48559 YGR109W-BYGR109W-B 4644 nt1.55□□□□□ -2.16
YPT11P48559 SPO24YPR036W-A 204 nt1.54□□□□□ -2.16
YPT11P48559 SLD3YGL113W 2007 nt1.54□□□□□ -2.16
YPT11P48559 SSK2YNR031C 4740 nt1.53□□□□□ -2.16
YPT11P48559 NUT1YGL151W 3399 nt1.53□□□□□ -2.17
YPT11P48559 KCS1YDR017C 3153 nt1.52□□□□□ -2.17
YPT11P48559 PMP1YCR024C-A 123 nt1.52□□□□□ -2.17
YPT11P48559 VPS15YBR097W 4365 nt1.52□□□□□ -2.17
YPT11P48559 HAL9YOL089C 3093 nt1.51□□□□□ -2.17
YPT11P48559 COY1YKL179C 2040 nt1.51□□□□□ -2.17
YPT11P48559 YDR354C-AYDR354C-A 144 nt1.51□□□□□ -2.17
Retrieved 100 of 7,029 protein–RNA pairs in 48.6 ms