Protein–RNA interactions for Protein: P48539

PCP4, Calmodulin regulator protein PCP4, humanhuman

Predictions only

Length 62 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCP4P48539 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC13.95□□□□□ -0.18
PCP4P48539 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC13.95□□□□□ -0.18
PCP4P48539 AC135050.7-201ENST00000624508 2218 ntBASIC13.95□□□□□ -0.18
PCP4P48539 EPHA2-201ENST00000358432 3964 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
PCP4P48539 LZTS1-202ENST00000381569 5706 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
PCP4P48539 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
PCP4P48539 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
PCP4P48539 AL138781.2-201ENST00000617896 1843 ntBASIC13.95□□□□□ -0.18
PCP4P48539 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
PCP4P48539 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC13.95□□□□□ -0.18
PCP4P48539 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
PCP4P48539 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
PCP4P48539 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC13.95□□□□□ -0.18
PCP4P48539 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
PCP4P48539 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
PCP4P48539 MIRLET7BHG-203ENST00000435439 2264 ntTSL 2 BASIC13.95□□□□□ -0.18
PCP4P48539 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC13.95□□□□□ -0.18
PCP4P48539 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
PCP4P48539 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
PCP4P48539 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
PCP4P48539 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
PCP4P48539 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
PCP4P48539 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
PCP4P48539 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
PCP4P48539 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC13.95□□□□□ -0.18
PCP4P48539 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
PCP4P48539 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
PCP4P48539 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
PCP4P48539 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
PCP4P48539 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
PCP4P48539 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
PCP4P48539 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
PCP4P48539 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC13.95□□□□□ -0.18
PCP4P48539 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
PCP4P48539 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
PCP4P48539 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC13.94□□□□□ -0.18
PCP4P48539 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC13.94□□□□□ -0.18
PCP4P48539 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
PCP4P48539 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
PCP4P48539 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
PCP4P48539 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC13.94□□□□□ -0.18
PCP4P48539 SIRPAP1-201ENST00000448467 1770 ntBASIC13.94□□□□□ -0.18
PCP4P48539 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC13.94□□□□□ -0.18
PCP4P48539 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
PCP4P48539 ITFG1-201ENST00000320640 3400 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
PCP4P48539 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC13.94□□□□□ -0.18
PCP4P48539 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
PCP4P48539 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
PCP4P48539 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
PCP4P48539 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
PCP4P48539 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
PCP4P48539 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC13.94□□□□□ -0.18
PCP4P48539 CES3-203ENST00000543856 3178 ntTSL 2 BASIC13.94□□□□□ -0.18
PCP4P48539 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC13.94□□□□□ -0.18
PCP4P48539 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
PCP4P48539 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
PCP4P48539 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
PCP4P48539 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC13.94□□□□□ -0.18
PCP4P48539 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
PCP4P48539 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC13.94□□□□□ -0.18
PCP4P48539 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
PCP4P48539 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC13.93□□□□□ -0.18
PCP4P48539 ARFGAP1-212ENST00000519604 3191 ntTSL 2 BASIC13.93□□□□□ -0.18
PCP4P48539 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC13.93□□□□□ -0.18
PCP4P48539 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
PCP4P48539 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
PCP4P48539 PGR-209ENST00000617858 2816 ntTSL 5 BASIC13.93□□□□□ -0.18
PCP4P48539 DENND5B-202ENST00000389082 9470 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
PCP4P48539 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC13.93□□□□□ -0.18
PCP4P48539 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
PCP4P48539 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
PCP4P48539 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
PCP4P48539 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
PCP4P48539 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC13.93□□□□□ -0.18
PCP4P48539 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
PCP4P48539 CICP14-201ENST00000629111 2732 ntBASIC13.93□□□□□ -0.18
PCP4P48539 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC13.93□□□□□ -0.18
PCP4P48539 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC13.93□□□□□ -0.18
PCP4P48539 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
PCP4P48539 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
PCP4P48539 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
PCP4P48539 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
PCP4P48539 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC13.93□□□□□ -0.18
PCP4P48539 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
PCP4P48539 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
PCP4P48539 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
PCP4P48539 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
PCP4P48539 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
PCP4P48539 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC13.93□□□□□ -0.18
PCP4P48539 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
PCP4P48539 FEM1AP4-201ENST00000443167 1987 ntBASIC13.92□□□□□ -0.18
PCP4P48539 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
PCP4P48539 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
PCP4P48539 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
PCP4P48539 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC13.92□□□□□ -0.18
PCP4P48539 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC13.92□□□□□ -0.18
PCP4P48539 EXT1-201ENST00000378204 8270 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
PCP4P48539 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
PCP4P48539 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
PCP4P48539 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms