Protein–RNA interactions for Protein: P43235

CTSK, Cathepsin K, humanhuman

Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSKP43235 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CTSKP43235 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CTSKP43235 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
CTSKP43235 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CTSKP43235 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC19.99■□□□□ 0.79
CTSKP43235 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC19.99■□□□□ 0.79
CTSKP43235 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
CTSKP43235 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
CTSKP43235 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
CTSKP43235 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
CTSKP43235 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
CTSKP43235 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC19.99■□□□□ 0.79
CTSKP43235 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC19.99■□□□□ 0.79
CTSKP43235 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CTSKP43235 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC19.99■□□□□ 0.79
CTSKP43235 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CTSKP43235 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
CTSKP43235 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
CTSKP43235 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
CTSKP43235 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC19.98■□□□□ 0.79
CTSKP43235 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC19.98■□□□□ 0.79
CTSKP43235 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
CTSKP43235 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CTSKP43235 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC19.98■□□□□ 0.79
CTSKP43235 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
CTSKP43235 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
CTSKP43235 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC19.98■□□□□ 0.79
CTSKP43235 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
CTSKP43235 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC19.98■□□□□ 0.79
CTSKP43235 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
CTSKP43235 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC19.98■□□□□ 0.79
CTSKP43235 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CTSKP43235 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC19.98■□□□□ 0.79
CTSKP43235 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC19.98■□□□□ 0.79
CTSKP43235 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
CTSKP43235 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC19.98■□□□□ 0.79
CTSKP43235 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CTSKP43235 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC19.98■□□□□ 0.79
CTSKP43235 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC19.98■□□□□ 0.79
CTSKP43235 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CTSKP43235 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
CTSKP43235 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC19.98■□□□□ 0.79
CTSKP43235 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
CTSKP43235 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC19.97■□□□□ 0.79
CTSKP43235 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
CTSKP43235 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CTSKP43235 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CTSKP43235 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CTSKP43235 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
CTSKP43235 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC19.97■□□□□ 0.79
CTSKP43235 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC19.97■□□□□ 0.79
CTSKP43235 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
CTSKP43235 DHDH-203ENST00000522614 776 ntTSL 5 BASIC19.97■□□□□ 0.79
CTSKP43235 RARRES2P10-201ENST00000564312 460 ntBASIC19.97■□□□□ 0.79
CTSKP43235 MIR4785-201ENST00000585005 73 ntBASIC19.97■□□□□ 0.79
CTSKP43235 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
CTSKP43235 AC113410.3-201ENST00000623366 203 ntBASIC19.97■□□□□ 0.79
CTSKP43235 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CTSKP43235 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC19.97■□□□□ 0.79
CTSKP43235 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
CTSKP43235 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
CTSKP43235 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
CTSKP43235 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC19.97■□□□□ 0.79
CTSKP43235 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CTSKP43235 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
CTSKP43235 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CTSKP43235 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
CTSKP43235 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CTSKP43235 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
CTSKP43235 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CTSKP43235 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CTSKP43235 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CTSKP43235 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CTSKP43235 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
CTSKP43235 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CTSKP43235 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC19.96■□□□□ 0.79
CTSKP43235 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC19.96■□□□□ 0.79
CTSKP43235 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
CTSKP43235 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC19.96■□□□□ 0.79
CTSKP43235 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC19.96■□□□□ 0.79
CTSKP43235 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CTSKP43235 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC19.96■□□□□ 0.79
CTSKP43235 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
CTSKP43235 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CTSKP43235 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CTSKP43235 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
CTSKP43235 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CTSKP43235 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CTSKP43235 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
CTSKP43235 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CTSKP43235 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
CTSKP43235 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC19.95■□□□□ 0.78
CTSKP43235 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC19.95■□□□□ 0.78
CTSKP43235 PRKY-204ENST00000533551 1019 ntBASIC19.95■□□□□ 0.78
CTSKP43235 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC19.95■□□□□ 0.78
CTSKP43235 CABP2-204ENST00000636477 941 ntTSL 5 BASIC19.95■□□□□ 0.78
CTSKP43235 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
CTSKP43235 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
CTSKP43235 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
CTSKP43235 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC19.95■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 37.1 ms