Protein–RNA interactions for Protein: P42261

GRIA1, Glutamate receptor 1, humanhuman

Predictions only

Length 906 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GRIA1P42261 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
GRIA1P42261 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
GRIA1P42261 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
GRIA1P42261 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
GRIA1P42261 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC20.36■□□□□ 0.85
GRIA1P42261 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
GRIA1P42261 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
GRIA1P42261 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
GRIA1P42261 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
GRIA1P42261 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
GRIA1P42261 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
GRIA1P42261 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC20.36■□□□□ 0.85
GRIA1P42261 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
GRIA1P42261 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC20.36■□□□□ 0.85
GRIA1P42261 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
GRIA1P42261 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
GRIA1P42261 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC20.36■□□□□ 0.85
GRIA1P42261 AC007322.1-201ENST00000426983 750 ntBASIC20.36■□□□□ 0.85
GRIA1P42261 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC20.36■□□□□ 0.85
GRIA1P42261 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
GRIA1P42261 AC007952.6-201ENST00000573168 2673 ntBASIC20.36■□□□□ 0.85
GRIA1P42261 AC003957.1-201ENST00000625108 2673 ntBASIC20.36■□□□□ 0.85
GRIA1P42261 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
GRIA1P42261 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
GRIA1P42261 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC20.36■□□□□ 0.85
GRIA1P42261 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
GRIA1P42261 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC20.35■□□□□ 0.85
GRIA1P42261 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC20.35■□□□□ 0.85
GRIA1P42261 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC20.35■□□□□ 0.85
GRIA1P42261 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
GRIA1P42261 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
GRIA1P42261 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
GRIA1P42261 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC20.35■□□□□ 0.85
GRIA1P42261 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
GRIA1P42261 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC20.35■□□□□ 0.85
GRIA1P42261 AC231657.2-201ENST00000624556 255 ntBASIC20.35■□□□□ 0.85
GRIA1P42261 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC20.35■□□□□ 0.85
GRIA1P42261 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC20.35■□□□□ 0.85
GRIA1P42261 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
GRIA1P42261 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
GRIA1P42261 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC20.35■□□□□ 0.85
GRIA1P42261 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
GRIA1P42261 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
GRIA1P42261 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
GRIA1P42261 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC20.35■□□□□ 0.85
GRIA1P42261 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
GRIA1P42261 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
GRIA1P42261 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC20.34■□□□□ 0.85
GRIA1P42261 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
GRIA1P42261 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
GRIA1P42261 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC20.34■□□□□ 0.85
GRIA1P42261 KRT18P68-201ENST00000392293 1000 ntBASIC20.34■□□□□ 0.85
GRIA1P42261 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC20.34■□□□□ 0.85
GRIA1P42261 AC093787.1-201ENST00000450396 207 ntBASIC20.34■□□□□ 0.85
GRIA1P42261 CYP2T3P-201ENST00000601990 817 ntBASIC20.34■□□□□ 0.85
GRIA1P42261 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
GRIA1P42261 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC20.34■□□□□ 0.85
GRIA1P42261 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC20.34■□□□□ 0.85
GRIA1P42261 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC20.34■□□□□ 0.85
GRIA1P42261 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
GRIA1P42261 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC20.34■□□□□ 0.85
GRIA1P42261 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
GRIA1P42261 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.85
GRIA1P42261 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
GRIA1P42261 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
GRIA1P42261 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC20.33■□□□□ 0.85
GRIA1P42261 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.85
GRIA1P42261 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
GRIA1P42261 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC20.33■□□□□ 0.85
GRIA1P42261 AC105020.6-201ENST00000621523 1217 ntBASIC20.33■□□□□ 0.85
GRIA1P42261 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.85
GRIA1P42261 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.84
GRIA1P42261 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
GRIA1P42261 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC20.33■□□□□ 0.84
GRIA1P42261 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC20.32■□□□□ 0.84
GRIA1P42261 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
GRIA1P42261 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC20.32■□□□□ 0.84
GRIA1P42261 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
GRIA1P42261 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
GRIA1P42261 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
GRIA1P42261 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
GRIA1P42261 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
GRIA1P42261 AC069236.1-201ENST00000604339 616 ntBASIC20.32■□□□□ 0.84
GRIA1P42261 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC20.32■□□□□ 0.84
GRIA1P42261 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC20.32■□□□□ 0.84
GRIA1P42261 AC010980.2-201ENST00000587099 1412 ntBASIC20.32■□□□□ 0.84
GRIA1P42261 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
GRIA1P42261 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC20.32■□□□□ 0.84
GRIA1P42261 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
GRIA1P42261 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC20.32■□□□□ 0.84
GRIA1P42261 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
GRIA1P42261 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC20.32■□□□□ 0.84
GRIA1P42261 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC20.32■□□□□ 0.84
GRIA1P42261 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
GRIA1P42261 MOK-225ENST00000522867 1883 ntTSL 5 BASIC20.31■□□□□ 0.84
GRIA1P42261 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
GRIA1P42261 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
GRIA1P42261 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
GRIA1P42261 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC20.31■□□□□ 0.84
GRIA1P42261 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC20.31■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 24.3 ms