Protein–RNA interactions for Protein: P39023

RPL3, 60S ribosomal protein L3, humanhuman

Known RBP Predictions only

Length 403 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL3P39023 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
RPL3P39023 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
RPL3P39023 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
RPL3P39023 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
RPL3P39023 AC006015.1-201ENST00000429970 570 ntBASIC19.05■□□□□ 0.64
RPL3P39023 DUX4L16-201ENST00000555130 1264 ntBASIC19.05■□□□□ 0.64
RPL3P39023 PLLP-204ENST00000569059 665 ntTSL 3 BASIC19.05■□□□□ 0.64
RPL3P39023 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC19.05■□□□□ 0.64
RPL3P39023 AC008694.1-202ENST00000636953 945 ntBASIC19.05■□□□□ 0.64
RPL3P39023 H19-201ENST00000411754 1788 ntTSL 5 BASIC19.05■□□□□ 0.64
RPL3P39023 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
RPL3P39023 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
RPL3P39023 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
RPL3P39023 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC19.05■□□□□ 0.64
RPL3P39023 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC19.05■□□□□ 0.64
RPL3P39023 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
RPL3P39023 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC19.04■□□□□ 0.64
RPL3P39023 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
RPL3P39023 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC19.04■□□□□ 0.64
RPL3P39023 STK25-205ENST00000405883 1904 ntTSL 2 BASIC19.04■□□□□ 0.64
RPL3P39023 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC19.04■□□□□ 0.64
RPL3P39023 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC19.04■□□□□ 0.64
RPL3P39023 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
RPL3P39023 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
RPL3P39023 AC068338.2-201ENST00000563278 1430 ntBASIC19.04■□□□□ 0.64
RPL3P39023 AC231657.2-201ENST00000624556 255 ntBASIC19.04■□□□□ 0.64
RPL3P39023 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
RPL3P39023 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
RPL3P39023 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC19.04■□□□□ 0.64
RPL3P39023 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC19.04■□□□□ 0.64
RPL3P39023 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
RPL3P39023 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC19.04■□□□□ 0.64
RPL3P39023 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC19.04■□□□□ 0.64
RPL3P39023 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
RPL3P39023 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
RPL3P39023 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC19.03■□□□□ 0.64
RPL3P39023 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
RPL3P39023 AFG3L1P-217ENST00000557444 2447 ntBASIC19.03■□□□□ 0.64
RPL3P39023 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
RPL3P39023 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC19.03■□□□□ 0.64
RPL3P39023 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
RPL3P39023 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
RPL3P39023 CNN2P6-201ENST00000439038 900 ntBASIC19.03■□□□□ 0.64
RPL3P39023 RARRES2P6-201ENST00000567333 442 ntBASIC19.03■□□□□ 0.64
RPL3P39023 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
RPL3P39023 AC011767.1-201ENST00000617410 1153 ntBASIC19.03■□□□□ 0.64
RPL3P39023 BID-214ENST00000617586 542 ntTSL 5 BASIC19.03■□□□□ 0.64
RPL3P39023 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
RPL3P39023 AC105020.6-201ENST00000621523 1217 ntBASIC19.03■□□□□ 0.64
RPL3P39023 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
RPL3P39023 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
RPL3P39023 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
RPL3P39023 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
RPL3P39023 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC19.03■□□□□ 0.64
RPL3P39023 GOLGA2P11-201ENST00000562660 1621 ntBASIC19.03■□□□□ 0.64
RPL3P39023 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
RPL3P39023 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
RPL3P39023 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC19.02■□□□□ 0.64
RPL3P39023 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
RPL3P39023 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC19.02■□□□□ 0.64
RPL3P39023 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC19.02■□□□□ 0.64
RPL3P39023 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
RPL3P39023 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
RPL3P39023 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
RPL3P39023 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
RPL3P39023 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
RPL3P39023 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
RPL3P39023 KRT18P68-201ENST00000392293 1000 ntBASIC19.02■□□□□ 0.64
RPL3P39023 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC19.02■□□□□ 0.64
RPL3P39023 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC19.02■□□□□ 0.64
RPL3P39023 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC19.02■□□□□ 0.64
RPL3P39023 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
RPL3P39023 MDK-213ENST00000617138 635 ntTSL 2 BASIC19.02■□□□□ 0.64
RPL3P39023 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
RPL3P39023 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC19.02■□□□□ 0.64
RPL3P39023 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC19.02■□□□□ 0.63
RPL3P39023 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC19.02■□□□□ 0.63
RPL3P39023 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC19.02■□□□□ 0.63
RPL3P39023 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
RPL3P39023 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC19.02■□□□□ 0.63
RPL3P39023 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC19.02■□□□□ 0.63
RPL3P39023 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC19.01■□□□□ 0.63
RPL3P39023 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
RPL3P39023 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC19.01■□□□□ 0.63
RPL3P39023 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
RPL3P39023 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC19.01■□□□□ 0.63
RPL3P39023 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
RPL3P39023 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
RPL3P39023 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
RPL3P39023 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
RPL3P39023 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC19.01■□□□□ 0.63
RPL3P39023 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
RPL3P39023 AC026271.2-201ENST00000428091 497 ntBASIC19.01■□□□□ 0.63
RPL3P39023 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC19.01■□□□□ 0.63
RPL3P39023 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC19.01■□□□□ 0.63
RPL3P39023 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
RPL3P39023 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
RPL3P39023 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
RPL3P39023 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC19.01■□□□□ 0.63
RPL3P39023 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC19.01■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 42.3 ms