Protein–RNA interactions for Protein: P38931

SSN2, Mediator of RNA polymerase II transcription subunit 13, yeastyeast

Predictions only

Length 1,420 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SSN2P38931 YMR304C-AYMR304C-A 351 nt-0.46□□□□□ -2.48
SSN2P38931 YNL146WYNL146W 303 nt-0.46□□□□□ -2.48
SSN2P38931 OLI1Q0130 231 nt-0.47□□□□□ -2.48
SSN2P38931 LRP1YHR081W 555 nt-0.47□□□□□ -2.48
SSN2P38931 ECM9YKR004C 1134 nt-0.47□□□□□ -2.49
SSN2P38931 YKU70YMR284W 1809 nt-0.48□□□□□ -2.49
SSN2P38931 RSM23YGL129C 1353 nt-0.48□□□□□ -2.49
SSN2P38931 SEC10YLR166C 2616 nt-0.48□□□□□ -2.49
SSN2P38931 YCR038W-AYCR038W-A 126 nt-0.48□□□□□ -2.49
SSN2P38931 YEL073CYEL073C 324 nt-0.48□□□□□ -2.49
SSN2P38931 LIN1YHR156C 1023 nt-0.48□□□□□ -2.49
SSN2P38931 COY1YKL179C 2040 nt-0.48□□□□□ -2.49
SSN2P38931 YJR011CYJR011C 786 nt-0.49□□□□□ -2.49
SSN2P38931 snR128snR128 126 nt-0.49□□□□□ -2.49
SSN2P38931 YDR269CYDR269C 324 nt-0.5□□□□□ -2.49
SSN2P38931 YLR198CYLR198C 360 nt-0.5□□□□□ -2.49
SSN2P38931 YLR399W-AYLR399W-A 105 nt-0.5□□□□□ -2.49
SSN2P38931 snR34snR34 203 nt-0.5□□□□□ -2.49
SSN2P38931 NIP1YMR309C 2439 nt-0.5□□□□□ -2.49
SSN2P38931 YFR012W-AYFR012W-A 87 nt-0.51□□□□□ -2.49
SSN2P38931 RRI2YOL117W 1938 nt-0.52□□□□□ -2.49
SSN2P38931 PAA1YDR071C 576 nt-0.52□□□□□ -2.49
SSN2P38931 YAP6YDR259C 1152 nt-0.52□□□□□ -2.49
SSN2P38931 SRB7YDR308C 423 nt-0.52□□□□□ -2.49
SSN2P38931 YER188C-AYER188C-A 300 nt-0.53□□□□□ -2.49
SSN2P38931 POL32YJR043C 1053 nt-0.53□□□□□ -2.49
SSN2P38931 YLR101CYLR101C 396 nt-0.53□□□□□ -2.49
SSN2P38931 YOL160WYOL160W 342 nt-0.53□□□□□ -2.49
SSN2P38931 YOR345CYOR345C 351 nt-0.53□□□□□ -2.49
SSN2P38931 LOC1YFR001W 615 nt-0.54□□□□□ -2.5
SSN2P38931 YKL023C-AYKL023C-A 228 nt-0.54□□□□□ -2.5
SSN2P38931 YBL008W-AYBL008W-A 240 nt-0.54□□□□□ -2.5
SSN2P38931 HTB1YDR224C 396 nt-0.55□□□□□ -2.5
SSN2P38931 RPL22BYFL034C-A 369 nt-0.55□□□□□ -2.5
SSN2P38931 YKL068W-AYKL068W-A 237 nt-0.55□□□□□ -2.5
SSN2P38931 CWC23YGL128C 852 nt-0.55□□□□□ -2.5
SSN2P38931 TIM13YGR181W 318 nt-0.55□□□□□ -2.5
SSN2P38931 SNU56YDR240C 1479 nt-0.56□□□□□ -2.5
SSN2P38931 YOR248WYOR248W 303 nt-0.56□□□□□ -2.5
SSN2P38931 YMR013C-AYMR013C-A 150 nt-0.57□□□□□ -2.5
SSN2P38931 PBI2YNL015W 228 nt-0.57□□□□□ -2.5
SSN2P38931 YNL146C-AYNL146C-A 195 nt-0.57□□□□□ -2.5
SSN2P38931 SPO21YOL091W 1830 nt-0.59□□□□□ -2.5
SSN2P38931 YDR220CYDR220C 294 nt-0.6□□□□□ -2.51
SSN2P38931 YPL261CYPL261C 309 nt-0.6□□□□□ -2.51
SSN2P38931 YHL046W-AYHL046W-A 327 nt-0.61□□□□□ -2.51
SSN2P38931 YIR044CYIR044C 186 nt-0.61□□□□□ -2.51
SSN2P38931 IRC16YPR038W 360 nt-0.61□□□□□ -2.51
SSN2P38931 YIR030W-AYIR030W-A 384 nt-0.62□□□□□ -2.51
SSN2P38931 YMR075C-AYMR075C-A 366 nt-0.62□□□□□ -2.51
SSN2P38931 HTB2YBL002W 396 nt-0.63□□□□□ -2.51
SSN2P38931 VAM3YOR106W 852 nt-0.63□□□□□ -2.51
SSN2P38931 UBS1YBR165W 834 nt-0.63□□□□□ -2.51
SSN2P38931 DIE2YGR227W 1578 nt-0.63□□□□□ -2.51
SSN2P38931 COG6YNL041C 2520 nt-0.63□□□□□ -2.51
SSN2P38931 YGR270C-AYGR270C-A 219 nt-0.64□□□□□ -2.51
SSN2P38931 YML108WYML108W 318 nt-0.64□□□□□ -2.51
SSN2P38931 tN(GUU)QtN(GUU)Q 71 nt-0.64□□□□□ -2.51
SSN2P38931 YJR141WYJR141W 1044 nt-0.64□□□□□ -2.51
SSN2P38931 YHR131W-AYHR131W-A 246 nt-0.65□□□□□ -2.51
SSN2P38931 DCP1YOL149W 696 nt-0.65□□□□□ -2.51
SSN2P38931 YGL239CYGL239C 315 nt-0.66□□□□□ -2.52
SSN2P38931 YPR096CYPR096C 303 nt-0.66□□□□□ -2.52
SSN2P38931 BUD26YDR241W 288 nt-0.67□□□□□ -2.52
SSN2P38931 YGL015CYGL015C 393 nt-0.67□□□□□ -2.52
SSN2P38931 RPM2YML091C 3609 nt-0.68□□□□□ -2.52
SSN2P38931 YLR171WYLR171W 390 nt-0.68□□□□□ -2.52
SSN2P38931 YCR022CYCR022C 345 nt-0.69□□□□□ -2.52
SSN2P38931 YLL006W-AYLL006W-A 177 nt-0.69□□□□□ -2.52
SSN2P38931 YKL202WYKL202W 582 nt-0.7□□□□□ -2.52
SSN2P38931 snR72snR72 98 nt-0.71□□□□□ -2.52
SSN2P38931 ILM1YJR118C 612 nt-0.71□□□□□ -2.52
SSN2P38931 YPL205CYPL205C 345 nt-0.72□□□□□ -2.52
SSN2P38931 SEM1YDR363W-A 270 nt-0.73□□□□□ -2.53
SSN2P38931 RPS20YHL015W 366 nt-0.73□□□□□ -2.53
SSN2P38931 MRPL32YCR003W 552 nt-0.74□□□□□ -2.53
SSN2P38931 tT(UGU)G1tT(UGU)G1 72 nt-0.74□□□□□ -2.53
SSN2P38931 tT(UGU)G2tT(UGU)G2 72 nt-0.74□□□□□ -2.53
SSN2P38931 tT(UGU)PtT(UGU)P 72 nt-0.74□□□□□ -2.53
SSN2P38931 ECL1YGR146C 636 nt-0.75□□□□□ -2.53
SSN2P38931 YMR307C-AYMR307C-A 195 nt-0.75□□□□□ -2.53
SSN2P38931 YPR039WYPR039W 336 nt-0.75□□□□□ -2.53
SSN2P38931 YDL185C-AYDL185C-A 228 nt-0.76□□□□□ -2.53
SSN2P38931 APQ13YJL075C 417 nt-0.76□□□□□ -2.53
SSN2P38931 YNL319WYNL319W 441 nt-0.77□□□□□ -2.53
SSN2P38931 snR51snR51 107 nt-0.77□□□□□ -2.53
SSN2P38931 YGR228WYGR228W 345 nt-0.78□□□□□ -2.53
SSN2P38931 YIL066W-AYIL066W-A 444 nt-0.78□□□□□ -2.53
SSN2P38931 YLR217WYLR217W 324 nt-0.78□□□□□ -2.53
SSN2P38931 IPP1YBR011C 864 nt-0.78□□□□□ -2.53
SSN2P38931 YHL009W-BYHL009W-B 5409 nt-0.78□□□□□ -2.53
SSN2P38931 YER135CYER135C 393 nt-0.79□□□□□ -2.54
SSN2P38931 snR33snR33 183 nt-0.79□□□□□ -2.54
SSN2P38931 YNL067W-BYNL067W-B 141 nt-0.8□□□□□ -2.54
SSN2P38931 YBL107W-AYBL107W-A 105 nt-0.8□□□□□ -2.54
SSN2P38931 YBR223W-AYBR223W-A 120 nt-0.8□□□□□ -2.54
SSN2P38931 ATG31YDR022C 591 nt-0.81□□□□□ -2.54
SSN2P38931 CUP1-1YHR053C 186 nt-0.81□□□□□ -2.54
SSN2P38931 CUP1-2YHR055C 186 nt-0.81□□□□□ -2.54
SSN2P38931 YOL029CYOL029C 606 nt-0.81□□□□□ -2.54
Retrieved 100 of 7,029 protein–RNA pairs in 29.5 ms