Protein–RNA interactions for Protein: P38606

ATP6V1A, V-type proton ATPase catalytic subunit A, humanhuman

Predictions only

Length 617 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V1AP38606 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
ATP6V1AP38606 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC25.73■■□□□ 1.71
ATP6V1AP38606 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC25.73■■□□□ 1.71
ATP6V1AP38606 SLC25A3P1-201ENST00000443844 931 ntBASIC25.73■■□□□ 1.71
ATP6V1AP38606 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC25.73■■□□□ 1.71
ATP6V1AP38606 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC25.73■■□□□ 1.71
ATP6V1AP38606 TMA16-209ENST00000513272 803 ntTSL 2 BASIC25.73■■□□□ 1.71
ATP6V1AP38606 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC25.73■■□□□ 1.71
ATP6V1AP38606 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC25.73■■□□□ 1.71
ATP6V1AP38606 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
ATP6V1AP38606 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC25.73■■□□□ 1.71
ATP6V1AP38606 RBM42-202ENST00000586618 771 ntTSL 3 BASIC25.73■■□□□ 1.71
ATP6V1AP38606 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC25.73■■□□□ 1.71
ATP6V1AP38606 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
ATP6V1AP38606 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC25.73■■□□□ 1.71
ATP6V1AP38606 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC25.73■■□□□ 1.71
ATP6V1AP38606 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
ATP6V1AP38606 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
ATP6V1AP38606 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC25.72■■□□□ 1.71
ATP6V1AP38606 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
ATP6V1AP38606 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
ATP6V1AP38606 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
ATP6V1AP38606 HLA-G-202ENST00000376815 851 ntBASIC25.72■■□□□ 1.71
ATP6V1AP38606 HLA-G-203ENST00000376818 1127 ntBASIC25.72■■□□□ 1.71
ATP6V1AP38606 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC25.72■■□□□ 1.71
ATP6V1AP38606 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC25.72■■□□□ 1.71
ATP6V1AP38606 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC25.72■■□□□ 1.71
ATP6V1AP38606 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC25.72■■□□□ 1.71
ATP6V1AP38606 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC25.72■■□□□ 1.71
ATP6V1AP38606 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
ATP6V1AP38606 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC25.71■■□□□ 1.71
ATP6V1AP38606 PTBP1P-201ENST00000554374 1601 ntBASIC25.71■■□□□ 1.71
ATP6V1AP38606 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC25.71■■□□□ 1.71
ATP6V1AP38606 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC25.71■■□□□ 1.71
ATP6V1AP38606 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC25.71■■□□□ 1.71
ATP6V1AP38606 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
ATP6V1AP38606 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC25.71■■□□□ 1.71
ATP6V1AP38606 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC25.71■■□□□ 1.71
ATP6V1AP38606 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC25.71■■□□□ 1.71
ATP6V1AP38606 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC25.71■■□□□ 1.71
ATP6V1AP38606 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC25.71■■□□□ 1.71
ATP6V1AP38606 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
ATP6V1AP38606 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
ATP6V1AP38606 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC25.71■■□□□ 1.71
ATP6V1AP38606 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC25.71■■□□□ 1.71
ATP6V1AP38606 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC25.71■■□□□ 1.71
ATP6V1AP38606 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC25.71■■□□□ 1.71
ATP6V1AP38606 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC25.7■■□□□ 1.71
ATP6V1AP38606 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.71
ATP6V1AP38606 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
ATP6V1AP38606 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC25.7■■□□□ 1.7
ATP6V1AP38606 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC25.7■■□□□ 1.7
ATP6V1AP38606 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC25.7■■□□□ 1.7
ATP6V1AP38606 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC25.7■■□□□ 1.7
ATP6V1AP38606 AC104076.2-201ENST00000448912 469 ntBASIC25.7■■□□□ 1.7
ATP6V1AP38606 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC25.7■■□□□ 1.7
ATP6V1AP38606 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
ATP6V1AP38606 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC25.7■■□□□ 1.7
ATP6V1AP38606 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC25.7■■□□□ 1.7
ATP6V1AP38606 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC25.7■■□□□ 1.7
ATP6V1AP38606 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC25.7■■□□□ 1.7
ATP6V1AP38606 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
ATP6V1AP38606 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
ATP6V1AP38606 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC25.7■■□□□ 1.7
ATP6V1AP38606 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC25.69■■□□□ 1.7
ATP6V1AP38606 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC25.69■■□□□ 1.7
ATP6V1AP38606 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC25.69■■□□□ 1.7
ATP6V1AP38606 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
ATP6V1AP38606 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
ATP6V1AP38606 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC25.69■■□□□ 1.7
ATP6V1AP38606 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC25.69■■□□□ 1.7
ATP6V1AP38606 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC25.69■■□□□ 1.7
ATP6V1AP38606 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC25.69■■□□□ 1.7
ATP6V1AP38606 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC25.69■■□□□ 1.7
ATP6V1AP38606 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC25.69■■□□□ 1.7
ATP6V1AP38606 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC25.69■■□□□ 1.7
ATP6V1AP38606 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
ATP6V1AP38606 ECEL1P1-201ENST00000373592 1742 ntBASIC25.68■■□□□ 1.7
ATP6V1AP38606 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC25.68■■□□□ 1.7
ATP6V1AP38606 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC25.68■■□□□ 1.7
ATP6V1AP38606 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
ATP6V1AP38606 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC25.68■■□□□ 1.7
ATP6V1AP38606 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC25.68■■□□□ 1.7
ATP6V1AP38606 NTF6B-201ENST00000591913 560 ntBASIC25.68■■□□□ 1.7
ATP6V1AP38606 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
ATP6V1AP38606 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
ATP6V1AP38606 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC25.68■■□□□ 1.7
ATP6V1AP38606 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
ATP6V1AP38606 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
ATP6V1AP38606 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
ATP6V1AP38606 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC25.67■■□□□ 1.7
ATP6V1AP38606 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
ATP6V1AP38606 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC25.67■■□□□ 1.7
ATP6V1AP38606 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
ATP6V1AP38606 DUX4L26-201ENST00000489078 1255 ntBASIC25.67■■□□□ 1.7
ATP6V1AP38606 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC25.67■■□□□ 1.7
ATP6V1AP38606 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC25.67■■□□□ 1.7
ATP6V1AP38606 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC25.67■■□□□ 1.7
ATP6V1AP38606 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
ATP6V1AP38606 AC244015.2-201ENST00000616358 1861 ntBASIC25.66■■□□□ 1.7
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms