Protein–RNA interactions for Protein: P37088

SCNN1A, Amiloride-sensitive sodium channel subunit alpha, humanhuman

Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1AP37088 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
SCNN1AP37088 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
SCNN1AP37088 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
SCNN1AP37088 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
SCNN1AP37088 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC20.94■□□□□ 0.94
SCNN1AP37088 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC20.94■□□□□ 0.94
SCNN1AP37088 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC20.94■□□□□ 0.94
SCNN1AP37088 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC20.94■□□□□ 0.94
SCNN1AP37088 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
SCNN1AP37088 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
SCNN1AP37088 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
SCNN1AP37088 AL390719.1-204ENST00000412397 1219 ntBASIC20.94■□□□□ 0.94
SCNN1AP37088 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC20.94■□□□□ 0.94
SCNN1AP37088 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC20.94■□□□□ 0.94
SCNN1AP37088 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
SCNN1AP37088 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
SCNN1AP37088 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC20.94■□□□□ 0.94
SCNN1AP37088 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
SCNN1AP37088 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC20.94■□□□□ 0.94
SCNN1AP37088 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
SCNN1AP37088 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
SCNN1AP37088 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
SCNN1AP37088 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
SCNN1AP37088 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC20.93■□□□□ 0.94
SCNN1AP37088 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
SCNN1AP37088 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
SCNN1AP37088 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
SCNN1AP37088 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
SCNN1AP37088 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
SCNN1AP37088 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
SCNN1AP37088 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC20.93■□□□□ 0.94
SCNN1AP37088 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC20.93■□□□□ 0.94
SCNN1AP37088 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC20.93■□□□□ 0.94
SCNN1AP37088 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
SCNN1AP37088 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC20.93■□□□□ 0.94
SCNN1AP37088 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
SCNN1AP37088 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
SCNN1AP37088 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC20.93■□□□□ 0.94
SCNN1AP37088 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
SCNN1AP37088 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
SCNN1AP37088 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
SCNN1AP37088 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SCNN1AP37088 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SCNN1AP37088 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
SCNN1AP37088 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
SCNN1AP37088 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC20.92■□□□□ 0.94
SCNN1AP37088 RER1-204ENST00000378518 522 ntTSL 3 BASIC20.92■□□□□ 0.94
SCNN1AP37088 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC20.92■□□□□ 0.94
SCNN1AP37088 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
SCNN1AP37088 PNMA6B-201ENST00000538162 1200 ntBASIC20.92■□□□□ 0.94
SCNN1AP37088 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC20.92■□□□□ 0.94
SCNN1AP37088 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC20.92■□□□□ 0.94
SCNN1AP37088 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SCNN1AP37088 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC20.92■□□□□ 0.94
SCNN1AP37088 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
SCNN1AP37088 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
SCNN1AP37088 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
SCNN1AP37088 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC20.92■□□□□ 0.94
SCNN1AP37088 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
SCNN1AP37088 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
SCNN1AP37088 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC20.92■□□□□ 0.94
SCNN1AP37088 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC20.92■□□□□ 0.94
SCNN1AP37088 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC20.92■□□□□ 0.94
SCNN1AP37088 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
SCNN1AP37088 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
SCNN1AP37088 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
SCNN1AP37088 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
SCNN1AP37088 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
SCNN1AP37088 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
SCNN1AP37088 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
SCNN1AP37088 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
SCNN1AP37088 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
SCNN1AP37088 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
SCNN1AP37088 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC20.91■□□□□ 0.94
SCNN1AP37088 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC20.91■□□□□ 0.94
SCNN1AP37088 GOLGA2P11-201ENST00000562660 1621 ntBASIC20.91■□□□□ 0.94
SCNN1AP37088 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
SCNN1AP37088 AC092368.3-202ENST00000574180 1591 ntBASIC20.91■□□□□ 0.94
SCNN1AP37088 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC20.91■□□□□ 0.94
SCNN1AP37088 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
SCNN1AP37088 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
SCNN1AP37088 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
SCNN1AP37088 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC20.9■□□□□ 0.94
SCNN1AP37088 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SCNN1AP37088 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SCNN1AP37088 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
SCNN1AP37088 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
SCNN1AP37088 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC20.9■□□□□ 0.94
SCNN1AP37088 KLF13-207ENST00000560473 489 ntTSL 3 BASIC20.9■□□□□ 0.94
SCNN1AP37088 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
SCNN1AP37088 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SCNN1AP37088 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
SCNN1AP37088 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SCNN1AP37088 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SCNN1AP37088 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
SCNN1AP37088 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
SCNN1AP37088 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC20.89■□□□□ 0.94
SCNN1AP37088 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.94
SCNN1AP37088 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC20.89■□□□□ 0.94
SCNN1AP37088 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 24.2 ms