Protein–RNA interactions for Protein: P35790

CHKA, Choline kinase alpha, humanhuman

Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHKAP35790 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC21.18■□□□□ 0.98
CHKAP35790 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CHKAP35790 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
CHKAP35790 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
CHKAP35790 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC21.18■□□□□ 0.98
CHKAP35790 NXN-202ENST00000537628 1340 ntTSL 3 BASIC21.18■□□□□ 0.98
CHKAP35790 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
CHKAP35790 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CHKAP35790 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC21.18■□□□□ 0.98
CHKAP35790 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
CHKAP35790 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
CHKAP35790 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC21.18■□□□□ 0.98
CHKAP35790 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
CHKAP35790 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
CHKAP35790 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CHKAP35790 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
CHKAP35790 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CHKAP35790 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC21.17■□□□□ 0.98
CHKAP35790 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CHKAP35790 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CHKAP35790 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC21.17■□□□□ 0.98
CHKAP35790 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC21.17■□□□□ 0.98
CHKAP35790 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
CHKAP35790 AC105020.6-201ENST00000621523 1217 ntBASIC21.17■□□□□ 0.98
CHKAP35790 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CHKAP35790 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC21.17■□□□□ 0.98
CHKAP35790 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC21.17■□□□□ 0.98
CHKAP35790 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
CHKAP35790 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CHKAP35790 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
CHKAP35790 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
CHKAP35790 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
CHKAP35790 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CHKAP35790 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC21.16■□□□□ 0.98
CHKAP35790 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
CHKAP35790 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
CHKAP35790 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CHKAP35790 POU5F1P3-201ENST00000428824 1078 ntBASIC21.16■□□□□ 0.98
CHKAP35790 GATS-209ENST00000454084 1030 ntTSL 3 BASIC21.16■□□□□ 0.98
CHKAP35790 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
CHKAP35790 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
CHKAP35790 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
CHKAP35790 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
CHKAP35790 INO80E-214ENST00000620599 515 ntTSL 2 BASIC21.16■□□□□ 0.98
CHKAP35790 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC21.16■□□□□ 0.98
CHKAP35790 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
CHKAP35790 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC21.16■□□□□ 0.98
CHKAP35790 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CHKAP35790 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
CHKAP35790 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CHKAP35790 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CHKAP35790 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
CHKAP35790 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
CHKAP35790 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
CHKAP35790 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CHKAP35790 AC087633.2-202ENST00000565166 1439 ntBASIC21.15■□□□□ 0.98
CHKAP35790 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CHKAP35790 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CHKAP35790 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CHKAP35790 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CHKAP35790 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CHKAP35790 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CHKAP35790 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC21.15■□□□□ 0.98
CHKAP35790 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC21.15■□□□□ 0.98
CHKAP35790 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC21.15■□□□□ 0.98
CHKAP35790 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
CHKAP35790 AC011484.1-201ENST00000377652 1995 ntBASIC21.15■□□□□ 0.98
CHKAP35790 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC21.15■□□□□ 0.98
CHKAP35790 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC21.15■□□□□ 0.98
CHKAP35790 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
CHKAP35790 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
CHKAP35790 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
CHKAP35790 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CHKAP35790 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.98
CHKAP35790 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
CHKAP35790 BID-204ENST00000399767 2129 ntTSL 2 BASIC21.14■□□□□ 0.98
CHKAP35790 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC21.14■□□□□ 0.98
CHKAP35790 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC21.14■□□□□ 0.98
CHKAP35790 AC099778.1-201ENST00000568593 1911 ntBASIC21.14■□□□□ 0.98
CHKAP35790 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CHKAP35790 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CHKAP35790 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC21.14■□□□□ 0.97
CHKAP35790 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC21.14■□□□□ 0.97
CHKAP35790 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC21.14■□□□□ 0.97
CHKAP35790 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC21.14■□□□□ 0.97
CHKAP35790 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC21.14■□□□□ 0.97
CHKAP35790 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC21.14■□□□□ 0.97
CHKAP35790 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CHKAP35790 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.97
CHKAP35790 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC21.14■□□□□ 0.97
CHKAP35790 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CHKAP35790 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CHKAP35790 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC21.14■□□□□ 0.97
CHKAP35790 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC21.14■□□□□ 0.97
CHKAP35790 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC21.13■□□□□ 0.97
CHKAP35790 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC21.13■□□□□ 0.97
CHKAP35790 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
CHKAP35790 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC21.13■□□□□ 0.97
CHKAP35790 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CHKAP35790 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC21.13■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms