Protein–RNA interactions for Protein: P35125

USP6, Ubiquitin carboxyl-terminal hydrolase 6, humanhuman

Predictions only

Length 1,406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP6P35125 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC27.33■■□□□ 1.97
USP6P35125 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC27.33■■□□□ 1.96
USP6P35125 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.96
USP6P35125 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC27.33■■□□□ 1.96
USP6P35125 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC27.33■■□□□ 1.96
USP6P35125 AP002982.1-201ENST00000492365 877 ntBASIC27.33■■□□□ 1.96
USP6P35125 AC145285.6-201ENST00000604632 637 ntBASIC27.33■■□□□ 1.96
USP6P35125 AP000525.1-201ENST00000608286 694 ntBASIC27.33■■□□□ 1.96
USP6P35125 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC27.33■■□□□ 1.96
USP6P35125 MIR6786-201ENST00000616843 113 ntBASIC27.33■■□□□ 1.96
USP6P35125 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC27.32■■□□□ 1.96
USP6P35125 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
USP6P35125 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC27.32■■□□□ 1.96
USP6P35125 BID-212ENST00000614949 1988 ntTSL 5 BASIC27.32■■□□□ 1.96
USP6P35125 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
USP6P35125 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
USP6P35125 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC27.32■■□□□ 1.96
USP6P35125 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC27.32■■□□□ 1.96
USP6P35125 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
USP6P35125 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC27.32■■□□□ 1.96
USP6P35125 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
USP6P35125 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC27.31■■□□□ 1.96
USP6P35125 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
USP6P35125 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
USP6P35125 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC27.31■■□□□ 1.96
USP6P35125 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC27.31■■□□□ 1.96
USP6P35125 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC27.31■■□□□ 1.96
USP6P35125 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
USP6P35125 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC27.3■■□□□ 1.96
USP6P35125 PLK5-205ENST00000642079 1969 ntBASIC27.3■■□□□ 1.96
USP6P35125 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
USP6P35125 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC27.3■■□□□ 1.96
USP6P35125 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC27.3■■□□□ 1.96
USP6P35125 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC27.3■■□□□ 1.96
USP6P35125 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC27.3■■□□□ 1.96
USP6P35125 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC27.3■■□□□ 1.96
USP6P35125 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC27.3■■□□□ 1.96
USP6P35125 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC27.3■■□□□ 1.96
USP6P35125 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
USP6P35125 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
USP6P35125 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC27.29■■□□□ 1.96
USP6P35125 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC27.29■■□□□ 1.96
USP6P35125 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC27.29■■□□□ 1.96
USP6P35125 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC27.29■■□□□ 1.96
USP6P35125 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
USP6P35125 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC27.28■■□□□ 1.96
USP6P35125 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
USP6P35125 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC27.28■■□□□ 1.96
USP6P35125 TMPOP1-202ENST00000424642 1267 ntBASIC27.28■■□□□ 1.96
USP6P35125 AC116562.2-201ENST00000507042 360 ntBASIC27.28■■□□□ 1.96
USP6P35125 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
USP6P35125 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC27.28■■□□□ 1.96
USP6P35125 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
USP6P35125 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC27.28■■□□□ 1.96
USP6P35125 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC27.28■■□□□ 1.96
USP6P35125 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
USP6P35125 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC27.28■■□□□ 1.96
USP6P35125 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC27.28■■□□□ 1.96
USP6P35125 UNC93B2-201ENST00000285383 730 ntBASIC27.27■■□□□ 1.96
USP6P35125 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC27.27■■□□□ 1.96
USP6P35125 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC27.27■■□□□ 1.96
USP6P35125 CBFB-203ENST00000561924 584 ntTSL 5 BASIC27.27■■□□□ 1.96
USP6P35125 GLDC-219ENST00000640208 420 ntTSL 2 BASIC27.27■■□□□ 1.96
USP6P35125 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
USP6P35125 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
USP6P35125 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC27.27■■□□□ 1.96
USP6P35125 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC27.27■■□□□ 1.96
USP6P35125 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.96
USP6P35125 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC27.26■■□□□ 1.95
USP6P35125 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC27.26■■□□□ 1.95
USP6P35125 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC27.26■■□□□ 1.95
USP6P35125 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC27.26■■□□□ 1.95
USP6P35125 CALM3-202ENST00000391918 702 ntTSL 2 BASIC27.26■■□□□ 1.95
USP6P35125 KSR1P1-201ENST00000446298 240 ntBASIC27.26■■□□□ 1.95
USP6P35125 C1QL1P1-201ENST00000568105 661 ntBASIC27.26■■□□□ 1.95
USP6P35125 P4HB-223ENST00000576390 439 ntTSL 4 BASIC27.26■■□□□ 1.95
USP6P35125 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC27.26■■□□□ 1.95
USP6P35125 ERF-202ENST00000440177 2032 ntTSL 2 BASIC27.26■■□□□ 1.95
USP6P35125 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC27.26■■□□□ 1.95
USP6P35125 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC27.26■■□□□ 1.95
USP6P35125 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.95
USP6P35125 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.95
USP6P35125 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
USP6P35125 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC27.25■■□□□ 1.95
USP6P35125 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC27.25■■□□□ 1.95
USP6P35125 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC27.25■■□□□ 1.95
USP6P35125 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC27.25■■□□□ 1.95
USP6P35125 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC27.25■■□□□ 1.95
USP6P35125 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC27.25■■□□□ 1.95
USP6P35125 KRT16P1-201ENST00000399124 1418 ntBASIC27.25■■□□□ 1.95
USP6P35125 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
USP6P35125 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC27.25■■□□□ 1.95
USP6P35125 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC27.25■■□□□ 1.95
USP6P35125 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC27.25■■□□□ 1.95
USP6P35125 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC27.25■■□□□ 1.95
USP6P35125 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC27.25■■□□□ 1.95
USP6P35125 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
USP6P35125 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC27.25■■□□□ 1.95
USP6P35125 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC27.25■■□□□ 1.95
USP6P35125 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC27.25■■□□□ 1.95
Retrieved 100 of 98,524 protein–RNA pairs in 44.1 ms