Protein–RNA interactions for Protein: P34903

GABRA3, Gamma-aminobutyric acid receptor subunit alpha-3, humanhuman

Predictions only

Length 492 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABRA3P34903 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
GABRA3P34903 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC18.68■□□□□ 0.58
GABRA3P34903 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC18.68■□□□□ 0.58
GABRA3P34903 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
GABRA3P34903 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
GABRA3P34903 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
GABRA3P34903 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
GABRA3P34903 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
GABRA3P34903 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC18.68■□□□□ 0.58
GABRA3P34903 GPX1P1-201ENST00000388829 606 ntBASIC18.68■□□□□ 0.58
GABRA3P34903 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
GABRA3P34903 NCF1B-203ENST00000435988 1254 ntBASIC18.68■□□□□ 0.58
GABRA3P34903 MAP2K4P1-201ENST00000438453 1195 ntBASIC18.68■□□□□ 0.58
GABRA3P34903 HES2-205ENST00000487437 968 ntTSL 3 BASIC18.68■□□□□ 0.58
GABRA3P34903 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC18.68■□□□□ 0.58
GABRA3P34903 TK2-208ENST00000545043 1120 ntTSL 2 BASIC18.68■□□□□ 0.58
GABRA3P34903 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC18.68■□□□□ 0.58
GABRA3P34903 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC18.68■□□□□ 0.58
GABRA3P34903 C2orf69P4-201ENST00000565394 541 ntBASIC18.68■□□□□ 0.58
GABRA3P34903 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
GABRA3P34903 BRWD1-AS2-201ENST00000603064 1028 ntBASIC18.68■□□□□ 0.58
GABRA3P34903 GXYLT1P5-201ENST00000614548 1189 ntBASIC18.68■□□□□ 0.58
GABRA3P34903 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC18.68■□□□□ 0.58
GABRA3P34903 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
GABRA3P34903 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC18.68■□□□□ 0.58
GABRA3P34903 MED17-221ENST00000639724 2317 ntTSL 5 BASIC18.68■□□□□ 0.58
GABRA3P34903 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC18.68■□□□□ 0.58
GABRA3P34903 NXN-202ENST00000537628 1340 ntTSL 3 BASIC18.68■□□□□ 0.58
GABRA3P34903 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC18.68■□□□□ 0.58
GABRA3P34903 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
GABRA3P34903 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
GABRA3P34903 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
GABRA3P34903 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
GABRA3P34903 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
GABRA3P34903 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC18.67■□□□□ 0.58
GABRA3P34903 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC18.67■□□□□ 0.58
GABRA3P34903 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC18.67■□□□□ 0.58
GABRA3P34903 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
GABRA3P34903 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
GABRA3P34903 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
GABRA3P34903 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
GABRA3P34903 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
GABRA3P34903 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
GABRA3P34903 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
GABRA3P34903 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
GABRA3P34903 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
GABRA3P34903 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
GABRA3P34903 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
GABRA3P34903 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
GABRA3P34903 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
GABRA3P34903 SLC29A4P1-201ENST00000398760 971 ntBASIC18.66■□□□□ 0.58
GABRA3P34903 MIPEPP3-201ENST00000412105 444 ntBASIC18.66■□□□□ 0.58
GABRA3P34903 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC18.66■□□□□ 0.58
GABRA3P34903 AC090192.1-201ENST00000517740 490 ntBASIC18.66■□□□□ 0.58
GABRA3P34903 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
GABRA3P34903 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC18.66■□□□□ 0.58
GABRA3P34903 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
GABRA3P34903 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
GABRA3P34903 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
GABRA3P34903 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
GABRA3P34903 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
GABRA3P34903 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC18.65■□□□□ 0.58
GABRA3P34903 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC18.65■□□□□ 0.58
GABRA3P34903 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
GABRA3P34903 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
GABRA3P34903 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
GABRA3P34903 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
GABRA3P34903 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC18.65■□□□□ 0.58
GABRA3P34903 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC18.65■□□□□ 0.58
GABRA3P34903 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
GABRA3P34903 TSPY6P-201ENST00000448518 926 ntBASIC18.65■□□□□ 0.58
GABRA3P34903 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC18.65■□□□□ 0.58
GABRA3P34903 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC18.65■□□□□ 0.58
GABRA3P34903 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
GABRA3P34903 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC18.65■□□□□ 0.58
GABRA3P34903 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC18.65■□□□□ 0.58
GABRA3P34903 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
GABRA3P34903 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
GABRA3P34903 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC18.65■□□□□ 0.58
GABRA3P34903 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
GABRA3P34903 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
GABRA3P34903 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
GABRA3P34903 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
GABRA3P34903 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
GABRA3P34903 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
GABRA3P34903 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
GABRA3P34903 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC18.65■□□□□ 0.58
GABRA3P34903 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
GABRA3P34903 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC18.64■□□□□ 0.58
GABRA3P34903 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC18.64■□□□□ 0.58
GABRA3P34903 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
GABRA3P34903 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
GABRA3P34903 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC18.64■□□□□ 0.57
GABRA3P34903 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC18.64■□□□□ 0.57
GABRA3P34903 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
GABRA3P34903 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC18.64■□□□□ 0.57
GABRA3P34903 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC18.64■□□□□ 0.57
GABRA3P34903 SERPINH1P1-201ENST00000419794 1249 ntBASIC18.64■□□□□ 0.57
GABRA3P34903 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC18.64■□□□□ 0.57
GABRA3P34903 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC18.64■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 41.3 ms