Protein–RNA interactions for Protein: P25441

RPC53, DNA-directed RNA polymerase III subunit RPC4, yeastyeast

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RPC53P25441 PCC1YKR095W-A 267 nt1.16□□□□□ -2.22
RPC53P25441 HUG1YML058W-A 207 nt1.16□□□□□ -2.22
RPC53P25441 IRC23YOR044W 474 nt1.16□□□□□ -2.22
RPC53P25441 SLD3YGL113W 2007 nt1.16□□□□□ -2.22
RPC53P25441 NUP157YER105C 4176 nt1.15□□□□□ -2.22
RPC53P25441 VAM6YDL077C 3150 nt1.14□□□□□ -2.23
RPC53P25441 YDR426CYDR426C 378 nt1.14□□□□□ -2.23
RPC53P25441 YAL068W-AYAL068W-A 255 nt1.14□□□□□ -2.23
RPC53P25441 WAR1YML076C 2835 nt1.13□□□□□ -2.23
RPC53P25441 PTP2YOR208W 2253 nt1.13□□□□□ -2.23
RPC53P25441 YER137W-AYER137W-A 306 nt1.13□□□□□ -2.23
RPC53P25441 MAM33YIL070C 801 nt1.13□□□□□ -2.23
RPC53P25441 SCC2YDR180W 4482 nt1.13□□□□□ -2.23
RPC53P25441 YAR009CYAR009C 3591 nt1.12□□□□□ -2.23
RPC53P25441 RPL34BYIL052C 366 nt1.12□□□□□ -2.23
RPC53P25441 NIP100YPL174C 2607 nt1.11□□□□□ -2.23
RPC53P25441 YLL007CYLL007C 1998 nt1.1□□□□□ -2.23
RPC53P25441 YDR157WYDR157W 402 nt1.1□□□□□ -2.23
RPC53P25441 PRP16YKR086W 3216 nt1.1□□□□□ -2.23
RPC53P25441 YJR029WYJR029W 5268 nt1.1□□□□□ -2.23
RPC53P25441 YPR137C-BYPR137C-B 5268 nt1.1□□□□□ -2.23
RPC53P25441 BEM2YER155C 6504 nt1.09□□□□□ -2.23
RPC53P25441 DOP1YDR141C 5097 nt1.08□□□□□ -2.24
RPC53P25441 YAL063C-AYAL063C-A 291 nt1.08□□□□□ -2.24
RPC53P25441 SMC1YFL008W 3678 nt1.08□□□□□ -2.24
RPC53P25441 YOR293C-AYOR293C-A 150 nt1.07□□□□□ -2.24
RPC53P25441 KAP120YPL125W 3099 nt1.07□□□□□ -2.24
RPC53P25441 YDL073WYDL073W 2955 nt1.06□□□□□ -2.24
RPC53P25441 EMT1tM(CAU)D 73 nt1.06□□□□□ -2.24
RPC53P25441 EMT5tM(CAU)J1 73 nt1.06□□□□□ -2.24
RPC53P25441 EMT3tM(CAU)J2 73 nt1.06□□□□□ -2.24
RPC53P25441 EMT4tM(CAU)M 73 nt1.06□□□□□ -2.24
RPC53P25441 EMT2tM(CAU)O2 73 nt1.06□□□□□ -2.24
RPC53P25441 YAR053WYAR053W 297 nt1.06□□□□□ -2.24
RPC53P25441 YHL042WYHL042W 453 nt1.05□□□□□ -2.24
RPC53P25441 YJR011CYJR011C 786 nt1.05□□□□□ -2.24
RPC53P25441 YBL008W-AYBL008W-A 240 nt1.05□□□□□ -2.24
RPC53P25441 ISD11YER048W-A 285 nt1.03□□□□□ -2.24
RPC53P25441 PAM16YJL104W 450 nt1.03□□□□□ -2.24
RPC53P25441 YOR029WYOR029W 336 nt1.02□□□□□ -2.25
RPC53P25441 BIL1YOR304C-A 231 nt1.02□□□□□ -2.25
RPC53P25441 HMRA2YCR096C 360 nt1.01□□□□□ -2.25
RPC53P25441 YDR521WYDR521W 336 nt1.01□□□□□ -2.25
RPC53P25441 UBP3YER151C 2739 nt1.01□□□□□ -2.25
RPC53P25441 YGR035CYGR035C 351 nt1□□□□□ -2.25
RPC53P25441 YOR282WYOR282W 321 nt1□□□□□ -2.25
RPC53P25441 DBP6YNR038W 1890 nt0.99□□□□□ -2.25
RPC53P25441 YDL196WYDL196W 330 nt0.99□□□□□ -2.25
RPC53P25441 CSN9YDR179C 489 nt0.99□□□□□ -2.25
RPC53P25441 YFL019CYFL019C 354 nt0.99□□□□□ -2.25
RPC53P25441 ALG13YGL047W 609 nt0.99□□□□□ -2.25
RPC53P25441 BUD3YCL014W 4911 nt0.99□□□□□ -2.25
RPC53P25441 OST1YJL002C 1431 nt0.98□□□□□ -2.25
RPC53P25441 IES4YOR189W 351 nt0.98□□□□□ -2.25
RPC53P25441 PAU24YBR301W 363 nt0.98□□□□□ -2.25
RPC53P25441 GEA2YEL022W 4380 nt0.98□□□□□ -2.25
RPC53P25441 HTB2YBL002W 396 nt0.97□□□□□ -2.25
RPC53P25441 YCK3YER123W 1575 nt0.96□□□□□ -2.26
RPC53P25441 YAR029WYAR029W 225 nt0.95□□□□□ -2.26
RPC53P25441 RPS30BYOR182C 192 nt0.95□□□□□ -2.26
RPC53P25441 YBR206WYBR206W 324 nt0.95□□□□□ -2.26
RPC53P25441 YPR117WYPR117W 7470 nt0.95□□□□□ -2.26
RPC53P25441 YPR170W-AYPR170W-A 186 nt0.94□□□□□ -2.26
RPC53P25441 YBR064WYBR064W 429 nt0.93□□□□□ -2.26
RPC53P25441 RPL35AYDL191W 363 nt0.92□□□□□ -2.26
RPC53P25441 OLI1Q0130 231 nt0.92□□□□□ -2.26
RPC53P25441 tW(UCA)QtW(UCA)Q 74 nt0.92□□□□□ -2.26
RPC53P25441 YPL044CYPL044C 549 nt0.92□□□□□ -2.26
RPC53P25441 YIL142C-AYIL142C-A 333 nt0.91□□□□□ -2.26
RPC53P25441 YLR334CYLR334C 381 nt0.91□□□□□ -2.26
RPC53P25441 SPO21YOL091W 1830 nt0.91□□□□□ -2.26
RPC53P25441 PAA1YDR071C 576 nt0.9□□□□□ -2.27
RPC53P25441 YDR118W-AYDR118W-A 117 nt0.89□□□□□ -2.27
RPC53P25441 YOR011W-AYOR011W-A 207 nt0.89□□□□□ -2.27
RPC53P25441 NOP9YJL010C 2001 nt0.88□□□□□ -2.27
RPC53P25441 YDR344CYDR344C 444 nt0.88□□□□□ -2.27
RPC53P25441 YHR007C-AYHR007C-A 216 nt0.88□□□□□ -2.27
RPC53P25441 INA22YIR024C 651 nt0.88□□□□□ -2.27
RPC53P25441 YPR012WYPR012W 255 nt0.88□□□□□ -2.27
RPC53P25441 YHR063W-AYHR063W-A 336 nt0.87□□□□□ -2.27
RPC53P25441 RPS25BYLR333C 327 nt0.87□□□□□ -2.27
RPC53P25441 CMC4YMR194C-B 222 nt0.87□□□□□ -2.27
RPC53P25441 PMP1YCR024C-A 123 nt0.86□□□□□ -2.27
RPC53P25441 ECM12YHR021W-A 456 nt0.86□□□□□ -2.27
RPC53P25441 TAR1YLR154W-C 375 nt0.85□□□□□ -2.27
RPC53P25441 BFR2YDR299W 1605 nt0.85□□□□□ -2.27
RPC53P25441 MCM10YIL150C 1716 nt0.84□□□□□ -2.27
RPC53P25441 YDR048CYDR048C 315 nt0.83□□□□□ -2.28
RPC53P25441 RPL26BYGR034W 384 nt0.83□□□□□ -2.28
RPC53P25441 YJL120WYJL120W 324 nt0.83□□□□□ -2.28
RPC53P25441 YMR321CYMR321C 318 nt0.83□□□□□ -2.28
RPC53P25441 YPR016W-AYPR016W-A 261 nt0.83□□□□□ -2.28
RPC53P25441 NHP2YDL208W 471 nt0.82□□□□□ -2.28
RPC53P25441 RKR1YMR247C 4689 nt0.82□□□□□ -2.28
RPC53P25441 SEC1YDR164C 2175 nt0.81□□□□□ -2.28
RPC53P25441 YHL046W-AYHL046W-A 327 nt0.8□□□□□ -2.28
RPC53P25441 YPL225WYPL225W 441 nt0.8□□□□□ -2.28
RPC53P25441 LTE1YAL024C 4308 nt0.79□□□□□ -2.28
RPC53P25441 YPR159C-AYPR159C-A 102 nt0.79□□□□□ -2.28
RPC53P25441 NPR2YEL062W 1848 nt0.79□□□□□ -2.28
Retrieved 100 of 7,029 protein–RNA pairs in 41.6 ms