Protein–RNA interactions for Protein: P20337

RAB3B, Ras-related protein Rab-3B, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3BP20337 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC17.56■□□□□ 0.4
RAB3BP20337 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
RAB3BP20337 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC17.56■□□□□ 0.4
RAB3BP20337 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
RAB3BP20337 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
RAB3BP20337 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC17.56■□□□□ 0.4
RAB3BP20337 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC17.56■□□□□ 0.4
RAB3BP20337 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC17.56■□□□□ 0.4
RAB3BP20337 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
RAB3BP20337 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
RAB3BP20337 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
RAB3BP20337 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
RAB3BP20337 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
RAB3BP20337 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
RAB3BP20337 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
RAB3BP20337 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC17.55■□□□□ 0.4
RAB3BP20337 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RAB3BP20337 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
RAB3BP20337 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC17.55■□□□□ 0.4
RAB3BP20337 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
RAB3BP20337 AL035685.1-201ENST00000636663 812 ntBASIC17.55■□□□□ 0.4
RAB3BP20337 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
RAB3BP20337 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC17.55■□□□□ 0.4
RAB3BP20337 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
RAB3BP20337 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC17.55■□□□□ 0.4
RAB3BP20337 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC17.55■□□□□ 0.4
RAB3BP20337 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC17.55■□□□□ 0.4
RAB3BP20337 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC17.55■□□□□ 0.4
RAB3BP20337 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC17.55■□□□□ 0.4
RAB3BP20337 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
RAB3BP20337 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RAB3BP20337 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
RAB3BP20337 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
RAB3BP20337 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
RAB3BP20337 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
RAB3BP20337 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
RAB3BP20337 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
RAB3BP20337 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC17.54■□□□□ 0.4
RAB3BP20337 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC17.54■□□□□ 0.4
RAB3BP20337 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
RAB3BP20337 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
RAB3BP20337 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC17.54■□□□□ 0.4
RAB3BP20337 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC17.54■□□□□ 0.4
RAB3BP20337 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC17.54■□□□□ 0.4
RAB3BP20337 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
RAB3BP20337 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC17.54■□□□□ 0.4
RAB3BP20337 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC17.54■□□□□ 0.4
RAB3BP20337 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
RAB3BP20337 AC093503.3-201ENST00000624917 2352 ntBASIC17.54■□□□□ 0.4
RAB3BP20337 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC17.54■□□□□ 0.4
RAB3BP20337 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
RAB3BP20337 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
RAB3BP20337 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
RAB3BP20337 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RAB3BP20337 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RAB3BP20337 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RAB3BP20337 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
RAB3BP20337 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RAB3BP20337 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
RAB3BP20337 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
RAB3BP20337 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RAB3BP20337 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
RAB3BP20337 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
RAB3BP20337 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
RAB3BP20337 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RAB3BP20337 CD37-204ENST00000535669 1674 ntTSL 2 BASIC17.53■□□□□ 0.4
RAB3BP20337 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC17.53■□□□□ 0.4
RAB3BP20337 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RAB3BP20337 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RAB3BP20337 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
RAB3BP20337 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC17.53■□□□□ 0.4
RAB3BP20337 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC17.53■□□□□ 0.4
RAB3BP20337 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC17.53■□□□□ 0.4
RAB3BP20337 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
RAB3BP20337 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC17.53■□□□□ 0.4
RAB3BP20337 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
RAB3BP20337 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RAB3BP20337 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
RAB3BP20337 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC17.53■□□□□ 0.4
RAB3BP20337 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
RAB3BP20337 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RAB3BP20337 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RAB3BP20337 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
RAB3BP20337 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
RAB3BP20337 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC17.52■□□□□ 0.4
RAB3BP20337 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
RAB3BP20337 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
RAB3BP20337 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC17.52■□□□□ 0.4
RAB3BP20337 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
RAB3BP20337 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC17.52■□□□□ 0.4
RAB3BP20337 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC17.52■□□□□ 0.4
RAB3BP20337 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
RAB3BP20337 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
RAB3BP20337 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC17.52■□□□□ 0.4
RAB3BP20337 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC17.52■□□□□ 0.4
RAB3BP20337 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
RAB3BP20337 PWWP2AP1-201ENST00000429776 2273 ntBASIC17.52■□□□□ 0.4
RAB3BP20337 KRT16P2-201ENST00000414673 1423 ntBASIC17.52■□□□□ 0.4
RAB3BP20337 KRT8P36-201ENST00000489121 1440 ntBASIC17.52■□□□□ 0.4
RAB3BP20337 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 20.2 ms