Protein–RNA interactions for Protein: P18206

VCL, Vinculin, humanhuman

Predictions only

Length 1,134 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCLP18206 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
VCLP18206 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
VCLP18206 KRT18P68-201ENST00000392293 1000 ntBASIC20.13■□□□□ 0.81
VCLP18206 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
VCLP18206 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC20.13■□□□□ 0.81
VCLP18206 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC20.13■□□□□ 0.81
VCLP18206 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC20.13■□□□□ 0.81
VCLP18206 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC20.13■□□□□ 0.81
VCLP18206 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC20.13■□□□□ 0.81
VCLP18206 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC20.13■□□□□ 0.81
VCLP18206 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
VCLP18206 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC20.13■□□□□ 0.81
VCLP18206 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
VCLP18206 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC20.13■□□□□ 0.81
VCLP18206 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
VCLP18206 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
VCLP18206 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
VCLP18206 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC20.12■□□□□ 0.81
VCLP18206 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
VCLP18206 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC20.12■□□□□ 0.81
VCLP18206 FP700111.2-201ENST00000619190 1892 ntBASIC20.12■□□□□ 0.81
VCLP18206 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
VCLP18206 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
VCLP18206 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
VCLP18206 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC20.12■□□□□ 0.81
VCLP18206 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
VCLP18206 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC20.12■□□□□ 0.81
VCLP18206 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC20.12■□□□□ 0.81
VCLP18206 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
VCLP18206 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
VCLP18206 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC20.12■□□□□ 0.81
VCLP18206 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
VCLP18206 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
VCLP18206 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
VCLP18206 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
VCLP18206 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
VCLP18206 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC20.11■□□□□ 0.81
VCLP18206 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
VCLP18206 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
VCLP18206 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
VCLP18206 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC20.11■□□□□ 0.81
VCLP18206 PPP1R14BP2-201ENST00000426284 444 ntBASIC20.11■□□□□ 0.81
VCLP18206 HES2-205ENST00000487437 968 ntTSL 3 BASIC20.11■□□□□ 0.81
VCLP18206 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC20.11■□□□□ 0.81
VCLP18206 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
VCLP18206 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
VCLP18206 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
VCLP18206 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
VCLP18206 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
VCLP18206 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
VCLP18206 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC20.11■□□□□ 0.81
VCLP18206 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC20.1■□□□□ 0.81
VCLP18206 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
VCLP18206 AC087633.2-202ENST00000565166 1439 ntBASIC20.1■□□□□ 0.81
VCLP18206 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC20.1■□□□□ 0.81
VCLP18206 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
VCLP18206 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC20.1■□□□□ 0.81
VCLP18206 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC20.1■□□□□ 0.81
VCLP18206 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
VCLP18206 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
VCLP18206 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC20.1■□□□□ 0.81
VCLP18206 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
VCLP18206 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC20.1■□□□□ 0.81
VCLP18206 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC20.1■□□□□ 0.81
VCLP18206 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC20.1■□□□□ 0.81
VCLP18206 AL355472.2-201ENST00000422958 438 ntBASIC20.1■□□□□ 0.81
VCLP18206 APTR-205ENST00000447009 902 ntTSL 2 BASIC20.1■□□□□ 0.81
VCLP18206 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC20.1■□□□□ 0.81
VCLP18206 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC20.1■□□□□ 0.81
VCLP18206 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
VCLP18206 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC20.1■□□□□ 0.81
VCLP18206 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC20.1■□□□□ 0.81
VCLP18206 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
VCLP18206 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
VCLP18206 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC20.1■□□□□ 0.81
VCLP18206 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
VCLP18206 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
VCLP18206 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC20.1■□□□□ 0.81
VCLP18206 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
VCLP18206 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC20.09■□□□□ 0.81
VCLP18206 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
VCLP18206 BID-203ENST00000399765 1879 ntTSL 2 BASIC20.09■□□□□ 0.81
VCLP18206 GCK-205ENST00000437084 1385 ntTSL 5 BASIC20.09■□□□□ 0.81
VCLP18206 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
VCLP18206 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
VCLP18206 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC20.09■□□□□ 0.81
VCLP18206 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
VCLP18206 AP005212.1-201ENST00000581547 1997 ntBASIC20.09■□□□□ 0.81
VCLP18206 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC20.09■□□□□ 0.81
VCLP18206 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC20.09■□□□□ 0.81
VCLP18206 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
VCLP18206 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
VCLP18206 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC20.09■□□□□ 0.81
VCLP18206 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC20.09■□□□□ 0.81
VCLP18206 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC20.09■□□□□ 0.81
VCLP18206 AC097658.1-201ENST00000475555 843 ntBASIC20.09■□□□□ 0.81
VCLP18206 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC20.09■□□□□ 0.81
VCLP18206 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC20.09■□□□□ 0.81
VCLP18206 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
VCLP18206 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 51.5 ms