Protein–RNA interactions for Protein: P10747

CD28, T-cell-specific surface glycoprotein CD28, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD28P10747 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
CD28P10747 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
CD28P10747 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
CD28P10747 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC15.72■□□□□ 0.11
CD28P10747 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
CD28P10747 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CD28P10747 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CD28P10747 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
CD28P10747 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
CD28P10747 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CD28P10747 EFS-203ENST00000429593 2610 ntTSL 2 BASIC15.71■□□□□ 0.11
CD28P10747 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
CD28P10747 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CD28P10747 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CD28P10747 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC15.71■□□□□ 0.11
CD28P10747 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC15.71■□□□□ 0.11
CD28P10747 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
CD28P10747 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
CD28P10747 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC15.71■□□□□ 0.11
CD28P10747 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
CD28P10747 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CD28P10747 AC133681.1-201ENST00000465482 601 ntBASIC15.71■□□□□ 0.11
CD28P10747 REXO2-216ENST00000544196 452 ntTSL 3 BASIC15.71■□□□□ 0.11
CD28P10747 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC15.71■□□□□ 0.11
CD28P10747 AC110285.5-201ENST00000611501 352 ntBASIC15.71■□□□□ 0.11
CD28P10747 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
CD28P10747 MIR2861-201ENST00000636310 90 ntBASIC15.71■□□□□ 0.11
CD28P10747 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CD28P10747 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
CD28P10747 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
CD28P10747 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.1
CD28P10747 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
CD28P10747 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.1
CD28P10747 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
CD28P10747 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC15.71■□□□□ 0.1
CD28P10747 AL024507.2-201ENST00000606070 2574 ntBASIC15.71■□□□□ 0.1
CD28P10747 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC15.7■□□□□ 0.1
CD28P10747 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CD28P10747 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC15.7■□□□□ 0.1
CD28P10747 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC15.7■□□□□ 0.1
CD28P10747 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CD28P10747 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CD28P10747 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CD28P10747 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CD28P10747 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
CD28P10747 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CD28P10747 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
CD28P10747 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CD28P10747 RPS2P55-201ENST00000397318 883 ntBASIC15.7■□□□□ 0.1
CD28P10747 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC15.7■□□□□ 0.1
CD28P10747 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CD28P10747 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC15.7■□□□□ 0.1
CD28P10747 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC15.7■□□□□ 0.1
CD28P10747 AC107956.1-201ENST00000494359 873 ntBASIC15.7■□□□□ 0.1
CD28P10747 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC15.7■□□□□ 0.1
CD28P10747 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC15.7■□□□□ 0.1
CD28P10747 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC15.7■□□□□ 0.1
CD28P10747 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC15.7■□□□□ 0.1
CD28P10747 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC15.7■□□□□ 0.1
CD28P10747 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
CD28P10747 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC15.7■□□□□ 0.1
CD28P10747 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CD28P10747 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
CD28P10747 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CD28P10747 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
CD28P10747 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC15.69■□□□□ 0.1
CD28P10747 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CD28P10747 BID-212ENST00000614949 1988 ntTSL 5 BASIC15.69■□□□□ 0.1
CD28P10747 KRT8P36-201ENST00000489121 1440 ntBASIC15.69■□□□□ 0.1
CD28P10747 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC15.69■□□□□ 0.1
CD28P10747 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC15.69■□□□□ 0.1
CD28P10747 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
CD28P10747 AC121338.2-201ENST00000622535 1744 ntBASIC15.69■□□□□ 0.1
CD28P10747 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
CD28P10747 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
CD28P10747 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CD28P10747 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CD28P10747 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CD28P10747 TSPY7P-201ENST00000431358 1114 ntBASIC15.69■□□□□ 0.1
CD28P10747 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC15.69■□□□□ 0.1
CD28P10747 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC15.69■□□□□ 0.1
CD28P10747 HES2-206ENST00000489730 730 ntTSL 2 BASIC15.69■□□□□ 0.1
CD28P10747 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC15.69■□□□□ 0.1
CD28P10747 PRKY-204ENST00000533551 1019 ntBASIC15.69■□□□□ 0.1
CD28P10747 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC15.69■□□□□ 0.1
CD28P10747 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC15.69■□□□□ 0.1
CD28P10747 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
CD28P10747 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
CD28P10747 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CD28P10747 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC15.69■□□□□ 0.1
CD28P10747 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CD28P10747 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC15.69■□□□□ 0.1
CD28P10747 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CD28P10747 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC15.69■□□□□ 0.1
CD28P10747 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC15.69■□□□□ 0.1
CD28P10747 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CD28P10747 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CD28P10747 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CD28P10747 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CD28P10747 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 20.5 ms