Protein–RNA interactions for Protein: P0DJD0

RGPD1, RANBP2-like and GRIP domain-containing protein 1, humanhuman

Predictions only

Length 1,748 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD1P0DJD0 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC26.93■■□□□ 1.9
RGPD1P0DJD0 TOLLIP-AS1-201ENST00000530897 939 ntBASIC26.93■■□□□ 1.9
RGPD1P0DJD0 AC087388.1-201ENST00000571370 1112 ntBASIC26.93■■□□□ 1.9
RGPD1P0DJD0 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
RGPD1P0DJD0 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC26.93■■□□□ 1.9
RGPD1P0DJD0 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC26.93■■□□□ 1.9
RGPD1P0DJD0 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
RGPD1P0DJD0 SRI-203ENST00000419179 1307 ntTSL 2 BASIC26.93■■□□□ 1.9
RGPD1P0DJD0 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC26.93■■□□□ 1.9
RGPD1P0DJD0 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC26.93■■□□□ 1.9
RGPD1P0DJD0 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC26.93■■□□□ 1.9
RGPD1P0DJD0 LTBR-211ENST00000543190 785 ntTSL 3 BASIC26.93■■□□□ 1.9
RGPD1P0DJD0 AF186192.3-201ENST00000583427 947 ntBASIC26.93■■□□□ 1.9
RGPD1P0DJD0 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC26.93■■□□□ 1.9
RGPD1P0DJD0 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
RGPD1P0DJD0 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC26.92■■□□□ 1.9
RGPD1P0DJD0 AC079598.2-202ENST00000546624 1451 ntBASIC26.92■■□□□ 1.9
RGPD1P0DJD0 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC26.92■■□□□ 1.9
RGPD1P0DJD0 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC26.92■■□□□ 1.9
RGPD1P0DJD0 AL031963.3-201ENST00000606441 850 ntBASIC26.92■■□□□ 1.9
RGPD1P0DJD0 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC26.92■■□□□ 1.9
RGPD1P0DJD0 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
RGPD1P0DJD0 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC26.92■■□□□ 1.9
RGPD1P0DJD0 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC26.91■■□□□ 1.9
RGPD1P0DJD0 LINC01568-207ENST00000641790 1380 ntBASIC26.91■■□□□ 1.9
RGPD1P0DJD0 UNC93B2-201ENST00000285383 730 ntBASIC26.91■■□□□ 1.9
RGPD1P0DJD0 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC26.91■■□□□ 1.9
RGPD1P0DJD0 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC26.91■■□□□ 1.9
RGPD1P0DJD0 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC26.91■■□□□ 1.9
RGPD1P0DJD0 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC26.91■■□□□ 1.9
RGPD1P0DJD0 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC26.91■■□□□ 1.9
RGPD1P0DJD0 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC26.91■■□□□ 1.9
RGPD1P0DJD0 REXO1L10P-201ENST00000615707 1290 ntBASIC26.91■■□□□ 1.9
RGPD1P0DJD0 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC26.91■■□□□ 1.9
RGPD1P0DJD0 AF106564.1-201ENST00000607058 2553 ntBASIC26.91■■□□□ 1.9
RGPD1P0DJD0 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
RGPD1P0DJD0 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC26.91■■□□□ 1.9
RGPD1P0DJD0 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC26.91■■□□□ 1.9
RGPD1P0DJD0 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC26.91■■□□□ 1.9
RGPD1P0DJD0 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC26.91■■□□□ 1.9
RGPD1P0DJD0 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC26.91■■□□□ 1.9
RGPD1P0DJD0 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC26.9■■□□□ 1.9
RGPD1P0DJD0 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC26.9■■□□□ 1.9
RGPD1P0DJD0 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC26.9■■□□□ 1.9
RGPD1P0DJD0 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC26.9■■□□□ 1.9
RGPD1P0DJD0 TPM4P1-201ENST00000436100 807 ntBASIC26.9■■□□□ 1.9
RGPD1P0DJD0 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC26.9■■□□□ 1.9
RGPD1P0DJD0 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
RGPD1P0DJD0 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC26.9■■□□□ 1.9
RGPD1P0DJD0 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC26.9■■□□□ 1.9
RGPD1P0DJD0 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC26.9■■□□□ 1.9
RGPD1P0DJD0 CFL2-205ENST00000555765 632 ntTSL 2 BASIC26.9■■□□□ 1.9
RGPD1P0DJD0 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC26.9■■□□□ 1.9
RGPD1P0DJD0 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
RGPD1P0DJD0 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC26.89■■□□□ 1.9
RGPD1P0DJD0 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC26.89■■□□□ 1.9
RGPD1P0DJD0 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC26.89■■□□□ 1.9
RGPD1P0DJD0 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.9
RGPD1P0DJD0 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC26.89■■□□□ 1.9
RGPD1P0DJD0 NMU-205ENST00000511469 756 ntTSL 3 BASIC26.89■■□□□ 1.9
RGPD1P0DJD0 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC26.89■■□□□ 1.9
RGPD1P0DJD0 WWOX-216ENST00000569818 525 ntBASIC26.89■■□□□ 1.9
RGPD1P0DJD0 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC26.89■■□□□ 1.9
RGPD1P0DJD0 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.89
RGPD1P0DJD0 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC26.89■■□□□ 1.89
RGPD1P0DJD0 STK25-205ENST00000405883 1904 ntTSL 2 BASIC26.89■■□□□ 1.89
RGPD1P0DJD0 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.89
RGPD1P0DJD0 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC26.89■■□□□ 1.89
RGPD1P0DJD0 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC26.88■■□□□ 1.89
RGPD1P0DJD0 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC26.88■■□□□ 1.89
RGPD1P0DJD0 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
RGPD1P0DJD0 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC26.88■■□□□ 1.89
RGPD1P0DJD0 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC26.88■■□□□ 1.89
RGPD1P0DJD0 AP000525.1-201ENST00000608286 694 ntBASIC26.88■■□□□ 1.89
RGPD1P0DJD0 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
RGPD1P0DJD0 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC26.88■■□□□ 1.89
RGPD1P0DJD0 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC26.88■■□□□ 1.89
RGPD1P0DJD0 LINC00565-201ENST00000562710 2331 ntBASIC26.88■■□□□ 1.89
RGPD1P0DJD0 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC26.88■■□□□ 1.89
RGPD1P0DJD0 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC26.87■■□□□ 1.89
RGPD1P0DJD0 UPK3BP1-201ENST00000428678 509 ntBASIC26.87■■□□□ 1.89
RGPD1P0DJD0 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC26.87■■□□□ 1.89
RGPD1P0DJD0 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC26.87■■□□□ 1.89
RGPD1P0DJD0 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC26.87■■□□□ 1.89
RGPD1P0DJD0 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC26.87■■□□□ 1.89
RGPD1P0DJD0 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC26.87■■□□□ 1.89
RGPD1P0DJD0 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC26.87■■□□□ 1.89
RGPD1P0DJD0 AC023632.3-201ENST00000521633 145 ntBASIC26.87■■□□□ 1.89
RGPD1P0DJD0 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC26.87■■□□□ 1.89
RGPD1P0DJD0 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC26.87■■□□□ 1.89
RGPD1P0DJD0 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC26.87■■□□□ 1.89
RGPD1P0DJD0 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC26.87■■□□□ 1.89
RGPD1P0DJD0 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC26.86■■□□□ 1.89
RGPD1P0DJD0 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
RGPD1P0DJD0 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC26.86■■□□□ 1.89
RGPD1P0DJD0 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC26.86■■□□□ 1.89
RGPD1P0DJD0 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC26.86■■□□□ 1.89
RGPD1P0DJD0 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC26.86■■□□□ 1.89
RGPD1P0DJD0 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC26.86■■□□□ 1.89
RGPD1P0DJD0 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC26.86■■□□□ 1.89
Retrieved 100 of 98,524 protein–RNA pairs in 19.8 ms