Protein–RNA interactions for Protein: P0C7W6

CCDC172, Coiled-coil domain-containing protein 172, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC172P0C7W6 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC21.67■■□□□ 1.06
CCDC172P0C7W6 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
CCDC172P0C7W6 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC21.66■■□□□ 1.06
CCDC172P0C7W6 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC21.66■■□□□ 1.06
CCDC172P0C7W6 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
CCDC172P0C7W6 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CCDC172P0C7W6 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
CCDC172P0C7W6 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CCDC172P0C7W6 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
CCDC172P0C7W6 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
CCDC172P0C7W6 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC21.66■■□□□ 1.06
CCDC172P0C7W6 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CCDC172P0C7W6 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC21.66■■□□□ 1.06
CCDC172P0C7W6 GXYLT1P2-201ENST00000433312 1230 ntBASIC21.66■■□□□ 1.06
CCDC172P0C7W6 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC21.66■■□□□ 1.06
CCDC172P0C7W6 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC21.66■■□□□ 1.06
CCDC172P0C7W6 AC087623.3-201ENST00000607047 1098 ntBASIC21.66■■□□□ 1.06
CCDC172P0C7W6 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CCDC172P0C7W6 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC21.66■■□□□ 1.06
CCDC172P0C7W6 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC21.66■■□□□ 1.06
CCDC172P0C7W6 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CCDC172P0C7W6 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC21.66■■□□□ 1.06
CCDC172P0C7W6 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC21.66■■□□□ 1.06
CCDC172P0C7W6 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC21.65■■□□□ 1.06
CCDC172P0C7W6 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
CCDC172P0C7W6 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CCDC172P0C7W6 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CCDC172P0C7W6 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC21.65■■□□□ 1.06
CCDC172P0C7W6 CYP21A1P-202ENST00000354927 1481 ntBASIC21.65■■□□□ 1.06
CCDC172P0C7W6 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC21.65■■□□□ 1.06
CCDC172P0C7W6 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CCDC172P0C7W6 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
CCDC172P0C7W6 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CCDC172P0C7W6 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
CCDC172P0C7W6 HSCB-202ENST00000398941 955 ntTSL 2 BASIC21.65■■□□□ 1.06
CCDC172P0C7W6 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC21.65■■□□□ 1.06
CCDC172P0C7W6 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC21.65■■□□□ 1.06
CCDC172P0C7W6 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC21.65■■□□□ 1.06
CCDC172P0C7W6 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC21.65■■□□□ 1.06
CCDC172P0C7W6 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CCDC172P0C7W6 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC21.65■■□□□ 1.06
CCDC172P0C7W6 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
CCDC172P0C7W6 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC21.64■■□□□ 1.06
CCDC172P0C7W6 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC21.64■■□□□ 1.06
CCDC172P0C7W6 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
CCDC172P0C7W6 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
CCDC172P0C7W6 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC21.64■■□□□ 1.05
CCDC172P0C7W6 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC21.64■■□□□ 1.05
CCDC172P0C7W6 AC016769.1-201ENST00000409132 1010 ntBASIC21.64■■□□□ 1.05
CCDC172P0C7W6 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC21.64■■□□□ 1.05
CCDC172P0C7W6 AC100791.3-201ENST00000617619 330 ntBASIC21.64■■□□□ 1.05
CCDC172P0C7W6 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC21.64■■□□□ 1.05
CCDC172P0C7W6 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
CCDC172P0C7W6 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
CCDC172P0C7W6 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC21.64■■□□□ 1.05
CCDC172P0C7W6 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC21.64■■□□□ 1.05
CCDC172P0C7W6 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC21.64■■□□□ 1.05
CCDC172P0C7W6 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC21.64■■□□□ 1.05
CCDC172P0C7W6 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC21.63■■□□□ 1.05
CCDC172P0C7W6 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CCDC172P0C7W6 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC21.63■■□□□ 1.05
CCDC172P0C7W6 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CCDC172P0C7W6 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC21.63■■□□□ 1.05
CCDC172P0C7W6 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC21.63■■□□□ 1.05
CCDC172P0C7W6 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC21.63■■□□□ 1.05
CCDC172P0C7W6 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC21.63■■□□□ 1.05
CCDC172P0C7W6 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
CCDC172P0C7W6 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
CCDC172P0C7W6 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CCDC172P0C7W6 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC21.63■■□□□ 1.05
CCDC172P0C7W6 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CCDC172P0C7W6 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC21.63■■□□□ 1.05
CCDC172P0C7W6 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CCDC172P0C7W6 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
CCDC172P0C7W6 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC21.63■■□□□ 1.05
CCDC172P0C7W6 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC21.63■■□□□ 1.05
CCDC172P0C7W6 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC21.63■■□□□ 1.05
CCDC172P0C7W6 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC21.63■■□□□ 1.05
CCDC172P0C7W6 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CCDC172P0C7W6 BID-204ENST00000399767 2129 ntTSL 2 BASIC21.62■■□□□ 1.05
CCDC172P0C7W6 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
CCDC172P0C7W6 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC21.62■■□□□ 1.05
CCDC172P0C7W6 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
CCDC172P0C7W6 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC21.62■■□□□ 1.05
CCDC172P0C7W6 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC21.62■■□□□ 1.05
CCDC172P0C7W6 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC21.62■■□□□ 1.05
CCDC172P0C7W6 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC21.62■■□□□ 1.05
CCDC172P0C7W6 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC21.62■■□□□ 1.05
CCDC172P0C7W6 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC21.62■■□□□ 1.05
CCDC172P0C7W6 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC21.62■■□□□ 1.05
CCDC172P0C7W6 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC21.62■■□□□ 1.05
CCDC172P0C7W6 WWOX-218ENST00000627394 894 ntTSL 5 BASIC21.62■■□□□ 1.05
CCDC172P0C7W6 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CCDC172P0C7W6 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC21.62■■□□□ 1.05
CCDC172P0C7W6 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC21.62■■□□□ 1.05
CCDC172P0C7W6 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC21.62■■□□□ 1.05
CCDC172P0C7W6 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
CCDC172P0C7W6 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC21.61■■□□□ 1.05
CCDC172P0C7W6 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC21.61■■□□□ 1.05
CCDC172P0C7W6 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 35.1 ms