Protein–RNA interactions for Protein: P0C2J4

TY2A-LR1, Transposon Ty2-LR1 Gag polyprotein, yeastyeast

Predictions only

Length 438 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TY2A-LR1P0C2J4 SPO75YLL005C 2607 nt1.53□□□□□ -2.16
TY2A-LR1P0C2J4 IFH1YLR223C 3258 nt1.53□□□□□ -2.16
TY2A-LR1P0C2J4 YCR022CYCR022C 345 nt1.53□□□□□ -2.16
TY2A-LR1P0C2J4 ALY2YJL084C 3141 nt1.53□□□□□ -2.16
TY2A-LR1P0C2J4 YMR321CYMR321C 318 nt1.53□□□□□ -2.16
TY2A-LR1P0C2J4 AIM44YPL158C 2277 nt1.53□□□□□ -2.16
TY2A-LR1P0C2J4 NUP192YJL039C 5052 nt1.52□□□□□ -2.17
TY2A-LR1P0C2J4 RPS25BYLR333C 327 nt1.52□□□□□ -2.17
TY2A-LR1P0C2J4 YOR282WYOR282W 321 nt1.52□□□□□ -2.17
TY2A-LR1P0C2J4 CAT8YMR280C 4302 nt1.52□□□□□ -2.17
TY2A-LR1P0C2J4 GPG1YGL121C 381 nt1.51□□□□□ -2.17
TY2A-LR1P0C2J4 YOR161W-BYOR161W-B 261 nt1.51□□□□□ -2.17
TY2A-LR1P0C2J4 YLR035C-AYLR035C-A 3468 nt1.51□□□□□ -2.17
TY2A-LR1P0C2J4 PBY1YBR094W 2262 nt1.51□□□□□ -2.17
TY2A-LR1P0C2J4 IRA1YBR140C 9279 nt1.5□□□□□ -2.17
TY2A-LR1P0C2J4 RPS27BYHR021C 249 nt1.5□□□□□ -2.17
TY2A-LR1P0C2J4 YJL120WYJL120W 324 nt1.5□□□□□ -2.17
TY2A-LR1P0C2J4 YPL152W-AYPL152W-A 99 nt1.5□□□□□ -2.17
TY2A-LR1P0C2J4 MMS4YBR098W 2076 nt1.5□□□□□ -2.17
TY2A-LR1P0C2J4 SXM1YDR395W 2835 nt1.5□□□□□ -2.17
TY2A-LR1P0C2J4 YDR521WYDR521W 336 nt1.49□□□□□ -2.17
TY2A-LR1P0C2J4 YJL015CYJL015C 285 nt1.49□□□□□ -2.17
TY2A-LR1P0C2J4 YMR247W-AYMR247W-A 144 nt1.49□□□□□ -2.17
TY2A-LR1P0C2J4 YOR218CYOR218C 420 nt1.49□□□□□ -2.17
TY2A-LR1P0C2J4 snR14snR14 160 nt1.49□□□□□ -2.17
TY2A-LR1P0C2J4 YEL020C-BYEL020C-B 198 nt1.48□□□□□ -2.17
TY2A-LR1P0C2J4 YHR063W-AYHR063W-A 336 nt1.48□□□□□ -2.17
TY2A-LR1P0C2J4 PIP2YOR363C 2991 nt1.47□□□□□ -2.17
TY2A-LR1P0C2J4 SPO21YOL091W 1830 nt1.47□□□□□ -2.17
TY2A-LR1P0C2J4 EST2YLR318W 2655 nt1.47□□□□□ -2.17
TY2A-LR1P0C2J4 YDL206WYDL206W 2289 nt1.46□□□□□ -2.18
TY2A-LR1P0C2J4 PAN2YGL094C 3348 nt1.46□□□□□ -2.18
TY2A-LR1P0C2J4 PMD1YER132C 5262 nt1.46□□□□□ -2.18
TY2A-LR1P0C2J4 PDE2YOR360C 1581 nt1.46□□□□□ -2.18
TY2A-LR1P0C2J4 AZF1YOR113W 2745 nt1.46□□□□□ -2.18
TY2A-LR1P0C2J4 IES4YOR189W 351 nt1.45□□□□□ -2.18
TY2A-LR1P0C2J4 YBR206WYBR206W 324 nt1.45□□□□□ -2.18
TY2A-LR1P0C2J4 SWI4YER111C 3282 nt1.45□□□□□ -2.18
TY2A-LR1P0C2J4 YLR422WYLR422W 5799 nt1.45□□□□□ -2.18
TY2A-LR1P0C2J4 SBE22YHR103W 2559 nt1.45□□□□□ -2.18
TY2A-LR1P0C2J4 FIG4YNL325C 2640 nt1.44□□□□□ -2.18
TY2A-LR1P0C2J4 YLR120W-AYLR120W-A 102 nt1.44□□□□□ -2.18
TY2A-LR1P0C2J4 YJL197C-AYJL197C-A 282 nt1.43□□□□□ -2.18
TY2A-LR1P0C2J4 YMR172C-AYMR172C-A 384 nt1.43□□□□□ -2.18
TY2A-LR1P0C2J4 CHS1YNL192W 3396 nt1.42□□□□□ -2.18
TY2A-LR1P0C2J4 SLD3YGL113W 2007 nt1.42□□□□□ -2.18
TY2A-LR1P0C2J4 YGL052WYGL052W 306 nt1.42□□□□□ -2.18
TY2A-LR1P0C2J4 PFD1YJL179W 330 nt1.42□□□□□ -2.18
TY2A-LR1P0C2J4 YOR011W-AYOR011W-A 207 nt1.42□□□□□ -2.18
TY2A-LR1P0C2J4 snR49snR49 165 nt1.42□□□□□ -2.18
TY2A-LR1P0C2J4 MSN5YDR335W 3675 nt1.42□□□□□ -2.18
TY2A-LR1P0C2J4 YGR109W-BYGR109W-B 4644 nt1.41□□□□□ -2.18
TY2A-LR1P0C2J4 snR8snR8 190 nt1.41□□□□□ -2.18
TY2A-LR1P0C2J4 YOR015WYOR015W 360 nt1.41□□□□□ -2.18
TY2A-LR1P0C2J4 YBR064WYBR064W 429 nt1.41□□□□□ -2.18
TY2A-LR1P0C2J4 YBR174CYBR174C 315 nt1.41□□□□□ -2.18
TY2A-LR1P0C2J4 SET3YKR029C 2256 nt1.41□□□□□ -2.18
TY2A-LR1P0C2J4 TRM732YMR259C 4263 nt1.4□□□□□ -2.18
TY2A-LR1P0C2J4 MSH3YCR092C 3057 nt1.4□□□□□ -2.19
TY2A-LR1P0C2J4 NUP145YGL092W 3954 nt1.4□□□□□ -2.19
TY2A-LR1P0C2J4 MCM10YIL150C 1716 nt1.4□□□□□ -2.19
TY2A-LR1P0C2J4 CLU1YMR012W 3834 nt1.4□□□□□ -2.19
TY2A-LR1P0C2J4 STO1YMR125W 2586 nt1.4□□□□□ -2.19
TY2A-LR1P0C2J4 PIK1YNL267W 3201 nt1.4□□□□□ -2.19
TY2A-LR1P0C2J4 YAR009CYAR009C 3591 nt1.39□□□□□ -2.19
TY2A-LR1P0C2J4 APL3YBL037W 3078 nt1.39□□□□□ -2.19
TY2A-LR1P0C2J4 YGL188C-AYGL188C-A 141 nt1.39□□□□□ -2.19
TY2A-LR1P0C2J4 CDC31YOR257W 486 nt1.39□□□□□ -2.19
TY2A-LR1P0C2J4 NUP188YML103C 4968 nt1.39□□□□□ -2.19
TY2A-LR1P0C2J4 CDC36YDL165W 576 nt1.38□□□□□ -2.19
TY2A-LR1P0C2J4 YBR221W-AYBR221W-A 105 nt1.38□□□□□ -2.19
TY2A-LR1P0C2J4 CCH1YGR217W 6120 nt1.38□□□□□ -2.19
TY2A-LR1P0C2J4 YPR092WYPR092W 306 nt1.37□□□□□ -2.19
TY2A-LR1P0C2J4 LAA1YJL207C 6045 nt1.37□□□□□ -2.19
TY2A-LR1P0C2J4 snR55snR55 98 nt1.36□□□□□ -2.19
TY2A-LR1P0C2J4 YDR366CYDR366C 399 nt1.36□□□□□ -2.19
TY2A-LR1P0C2J4 ANS1YHR126C 480 nt1.36□□□□□ -2.19
TY2A-LR1P0C2J4 SPC110YDR356W 2835 nt1.35□□□□□ -2.19
TY2A-LR1P0C2J4 SEC3YER008C 4011 nt1.35□□□□□ -2.19
TY2A-LR1P0C2J4 YLL020CYLL020C 306 nt1.35□□□□□ -2.19
TY2A-LR1P0C2J4 YMR307C-AYMR307C-A 195 nt1.35□□□□□ -2.19
TY2A-LR1P0C2J4 YOL155W-AYOL155W-A 135 nt1.35□□□□□ -2.19
TY2A-LR1P0C2J4 YBR200W-AYBR200W-A 165 nt1.35□□□□□ -2.19
TY2A-LR1P0C2J4 ROM2YLR371W 4071 nt1.35□□□□□ -2.19
TY2A-LR1P0C2J4 FIG2YCR089W 4830 nt1.35□□□□□ -2.19
TY2A-LR1P0C2J4 SMC1YFL008W 3678 nt1.33□□□□□ -2.2
TY2A-LR1P0C2J4 AHC1YOR023C 1701 nt1.33□□□□□ -2.2
TY2A-LR1P0C2J4 ECM12YHR021W-A 456 nt1.33□□□□□ -2.2
TY2A-LR1P0C2J4 WAR1YML076C 2835 nt1.33□□□□□ -2.2
TY2A-LR1P0C2J4 RRT15YLR162W-A 189 nt1.32□□□□□ -2.2
TY2A-LR1P0C2J4 MDS3YGL197W 4464 nt1.32□□□□□ -2.2
TY2A-LR1P0C2J4 YOR072W-BYOR072W-B 162 nt1.31□□□□□ -2.2
TY2A-LR1P0C2J4 tQ(UUG)E2tQ(UUG)E2 72 nt1.3□□□□□ -2.2
TY2A-LR1P0C2J4 ABF2YMR072W 552 nt1.3□□□□□ -2.2
TY2A-LR1P0C2J4 SGF11YPL047W 300 nt1.3□□□□□ -2.2
TY2A-LR1P0C2J4 SEC21YNL287W 2808 nt1.3□□□□□ -2.2
TY2A-LR1P0C2J4 EAF1YDR359C 2949 nt1.29□□□□□ -2.2
TY2A-LR1P0C2J4 PET127YOR017W 2403 nt1.29□□□□□ -2.2
TY2A-LR1P0C2J4 SSK2YNR031C 4740 nt1.29□□□□□ -2.2
TY2A-LR1P0C2J4 tF(GAA)QtF(GAA)Q 75 nt1.29□□□□□ -2.2
Retrieved 100 of 7,029 protein–RNA pairs in 50 ms