Protein–RNA interactions for Protein: P09603

CSF1, Macrophage colony-stimulating factor 1, humanhuman

Predictions only

Length 554 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSF1P09603 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
CSF1P09603 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
CSF1P09603 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CSF1P09603 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC17.31■□□□□ 0.36
CSF1P09603 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CSF1P09603 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
CSF1P09603 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
CSF1P09603 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
CSF1P09603 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC17.31■□□□□ 0.36
CSF1P09603 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC17.31■□□□□ 0.36
CSF1P09603 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CSF1P09603 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CSF1P09603 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC17.31■□□□□ 0.36
CSF1P09603 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC17.31■□□□□ 0.36
CSF1P09603 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
CSF1P09603 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
CSF1P09603 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
CSF1P09603 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
CSF1P09603 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
CSF1P09603 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
CSF1P09603 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CSF1P09603 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC17.3■□□□□ 0.36
CSF1P09603 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC17.3■□□□□ 0.36
CSF1P09603 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CSF1P09603 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC17.3■□□□□ 0.36
CSF1P09603 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CSF1P09603 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
CSF1P09603 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC17.3■□□□□ 0.36
CSF1P09603 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
CSF1P09603 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC17.3■□□□□ 0.36
CSF1P09603 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CSF1P09603 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
CSF1P09603 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CSF1P09603 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CSF1P09603 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC17.3■□□□□ 0.36
CSF1P09603 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC17.3■□□□□ 0.36
CSF1P09603 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CSF1P09603 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
CSF1P09603 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CSF1P09603 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CSF1P09603 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
CSF1P09603 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CSF1P09603 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CSF1P09603 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CSF1P09603 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
CSF1P09603 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CSF1P09603 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC17.29■□□□□ 0.36
CSF1P09603 FXN-202ENST00000396364 980 ntTSL 5 BASIC17.29■□□□□ 0.36
CSF1P09603 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CSF1P09603 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CSF1P09603 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC17.29■□□□□ 0.36
CSF1P09603 SMUG1P1-201ENST00000590640 811 ntBASIC17.29■□□□□ 0.36
CSF1P09603 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CSF1P09603 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
CSF1P09603 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
CSF1P09603 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CSF1P09603 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CSF1P09603 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
CSF1P09603 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CSF1P09603 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
CSF1P09603 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CSF1P09603 AC009237.3-201ENST00000393279 1427 ntBASIC17.29■□□□□ 0.36
CSF1P09603 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC17.29■□□□□ 0.36
CSF1P09603 TMEM179-206ENST00000616017 1645 ntBASIC17.29■□□□□ 0.36
CSF1P09603 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC17.28■□□□□ 0.36
CSF1P09603 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
CSF1P09603 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC17.28■□□□□ 0.36
CSF1P09603 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC17.28■□□□□ 0.36
CSF1P09603 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
CSF1P09603 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
CSF1P09603 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC17.28■□□□□ 0.36
CSF1P09603 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
CSF1P09603 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CSF1P09603 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC17.28■□□□□ 0.36
CSF1P09603 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC17.28■□□□□ 0.36
CSF1P09603 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CSF1P09603 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC17.28■□□□□ 0.36
CSF1P09603 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC17.28■□□□□ 0.36
CSF1P09603 AC092437.1-201ENST00000624794 1048 ntBASIC17.28■□□□□ 0.36
CSF1P09603 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CSF1P09603 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CSF1P09603 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CSF1P09603 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CSF1P09603 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CSF1P09603 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
CSF1P09603 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
CSF1P09603 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CSF1P09603 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
CSF1P09603 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC17.28■□□□□ 0.36
CSF1P09603 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CSF1P09603 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
CSF1P09603 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC17.27■□□□□ 0.36
CSF1P09603 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CSF1P09603 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC17.27■□□□□ 0.36
CSF1P09603 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CSF1P09603 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CSF1P09603 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC17.27■□□□□ 0.36
CSF1P09603 POLI-202ENST00000406285 2030 ntTSL 2 BASIC17.27■□□□□ 0.36
CSF1P09603 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CSF1P09603 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 49.3 ms