Protein–RNA interactions for Protein: P06753

TPM3, Tropomyosin alpha-3 chain, humanhuman

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3P06753 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
TPM3P06753 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC22.46■■□□□ 1.19
TPM3P06753 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC22.46■■□□□ 1.19
TPM3P06753 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
TPM3P06753 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC22.46■■□□□ 1.19
TPM3P06753 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
TPM3P06753 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.19
TPM3P06753 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC22.45■■□□□ 1.19
TPM3P06753 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
TPM3P06753 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
TPM3P06753 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC22.45■■□□□ 1.18
TPM3P06753 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
TPM3P06753 AC093484.2-201ENST00000580996 2166 ntBASIC22.45■■□□□ 1.18
TPM3P06753 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC22.45■■□□□ 1.18
TPM3P06753 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC22.45■■□□□ 1.18
TPM3P06753 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
TPM3P06753 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC22.45■■□□□ 1.18
TPM3P06753 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC22.45■■□□□ 1.18
TPM3P06753 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC22.45■■□□□ 1.18
TPM3P06753 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC22.45■■□□□ 1.18
TPM3P06753 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC22.45■■□□□ 1.18
TPM3P06753 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC22.45■■□□□ 1.18
TPM3P06753 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC22.45■■□□□ 1.18
TPM3P06753 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
TPM3P06753 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC22.45■■□□□ 1.18
TPM3P06753 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC22.45■■□□□ 1.18
TPM3P06753 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC22.45■■□□□ 1.18
TPM3P06753 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
TPM3P06753 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC22.45■■□□□ 1.18
TPM3P06753 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC22.45■■□□□ 1.18
TPM3P06753 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC22.45■■□□□ 1.18
TPM3P06753 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC22.44■■□□□ 1.18
TPM3P06753 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC22.44■■□□□ 1.18
TPM3P06753 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC22.44■■□□□ 1.18
TPM3P06753 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC22.44■■□□□ 1.18
TPM3P06753 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC22.44■■□□□ 1.18
TPM3P06753 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC22.44■■□□□ 1.18
TPM3P06753 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC22.44■■□□□ 1.18
TPM3P06753 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC22.44■■□□□ 1.18
TPM3P06753 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC22.44■■□□□ 1.18
TPM3P06753 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC22.44■■□□□ 1.18
TPM3P06753 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
TPM3P06753 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC22.44■■□□□ 1.18
TPM3P06753 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC22.44■■□□□ 1.18
TPM3P06753 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC22.44■■□□□ 1.18
TPM3P06753 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC22.44■■□□□ 1.18
TPM3P06753 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC22.44■■□□□ 1.18
TPM3P06753 AC026471.1-201ENST00000564629 3026 ntBASIC22.44■■□□□ 1.18
TPM3P06753 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
TPM3P06753 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
TPM3P06753 AC093503.3-201ENST00000624917 2352 ntBASIC22.43■■□□□ 1.18
TPM3P06753 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC22.43■■□□□ 1.18
TPM3P06753 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC22.43■■□□□ 1.18
TPM3P06753 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC22.43■■□□□ 1.18
TPM3P06753 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
TPM3P06753 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
TPM3P06753 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC22.43■■□□□ 1.18
TPM3P06753 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC22.43■■□□□ 1.18
TPM3P06753 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC22.43■■□□□ 1.18
TPM3P06753 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC22.43■■□□□ 1.18
TPM3P06753 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC22.43■■□□□ 1.18
TPM3P06753 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
TPM3P06753 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC22.43■■□□□ 1.18
TPM3P06753 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC22.43■■□□□ 1.18
TPM3P06753 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC22.43■■□□□ 1.18
TPM3P06753 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC22.43■■□□□ 1.18
TPM3P06753 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC22.43■■□□□ 1.18
TPM3P06753 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
TPM3P06753 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC22.43■■□□□ 1.18
TPM3P06753 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
TPM3P06753 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
TPM3P06753 Z82202.1-201ENST00000623446 1880 ntBASIC22.43■■□□□ 1.18
TPM3P06753 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC22.43■■□□□ 1.18
TPM3P06753 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
TPM3P06753 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
TPM3P06753 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC22.42■■□□□ 1.18
TPM3P06753 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
TPM3P06753 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
TPM3P06753 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC22.42■■□□□ 1.18
TPM3P06753 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
TPM3P06753 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC22.42■■□□□ 1.18
TPM3P06753 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC22.42■■□□□ 1.18
TPM3P06753 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
TPM3P06753 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC22.42■■□□□ 1.18
TPM3P06753 AC120498.10-201ENST00000621827 505 ntBASIC22.42■■□□□ 1.18
TPM3P06753 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
TPM3P06753 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
TPM3P06753 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC22.42■■□□□ 1.18
TPM3P06753 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC22.42■■□□□ 1.18
TPM3P06753 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
TPM3P06753 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
TPM3P06753 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
TPM3P06753 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC22.42■■□□□ 1.18
TPM3P06753 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
TPM3P06753 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC22.42■■□□□ 1.18
TPM3P06753 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
TPM3P06753 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC22.42■■□□□ 1.18
TPM3P06753 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC22.41■■□□□ 1.18
TPM3P06753 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
TPM3P06753 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC22.41■■□□□ 1.18
Retrieved 100 of 98,524 protein–RNA pairs in 49 ms