Protein–RNA interactions for Protein: P02654

APOC1, Apolipoprotein C-I, humanhuman

Predictions only

Length 83 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1P02654 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC17.7■□□□□ 0.42
APOC1P02654 AL512408.1-201ENST00000569378 2000 ntBASIC17.7■□□□□ 0.42
APOC1P02654 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
APOC1P02654 AC026471.1-201ENST00000564629 3026 ntBASIC17.7■□□□□ 0.42
APOC1P02654 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
APOC1P02654 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC17.7■□□□□ 0.42
APOC1P02654 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
APOC1P02654 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
APOC1P02654 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
APOC1P02654 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
APOC1P02654 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC17.69■□□□□ 0.42
APOC1P02654 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
APOC1P02654 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
APOC1P02654 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
APOC1P02654 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
APOC1P02654 STX7-201ENST00000367937 1090 ntTSL 5 BASIC17.69■□□□□ 0.42
APOC1P02654 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC17.69■□□□□ 0.42
APOC1P02654 AC016769.1-201ENST00000409132 1010 ntBASIC17.69■□□□□ 0.42
APOC1P02654 GXYLT1P2-201ENST00000433312 1230 ntBASIC17.69■□□□□ 0.42
APOC1P02654 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
APOC1P02654 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC17.69■□□□□ 0.42
APOC1P02654 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC17.69■□□□□ 0.42
APOC1P02654 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
APOC1P02654 SPI1-203ENST00000533030 661 ntTSL 2 BASIC17.69■□□□□ 0.42
APOC1P02654 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
APOC1P02654 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
APOC1P02654 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC17.69■□□□□ 0.42
APOC1P02654 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC17.69■□□□□ 0.42
APOC1P02654 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC17.69■□□□□ 0.42
APOC1P02654 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
APOC1P02654 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
APOC1P02654 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC17.69■□□□□ 0.42
APOC1P02654 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
APOC1P02654 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC17.68■□□□□ 0.42
APOC1P02654 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC17.68■□□□□ 0.42
APOC1P02654 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
APOC1P02654 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
APOC1P02654 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
APOC1P02654 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
APOC1P02654 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
APOC1P02654 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
APOC1P02654 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
APOC1P02654 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
APOC1P02654 BMP1-204ENST00000397814 836 ntTSL 4 BASIC17.68■□□□□ 0.42
APOC1P02654 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
APOC1P02654 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC17.68■□□□□ 0.42
APOC1P02654 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
APOC1P02654 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
APOC1P02654 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC17.68■□□□□ 0.42
APOC1P02654 AC087633.2-202ENST00000565166 1439 ntBASIC17.68■□□□□ 0.42
APOC1P02654 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
APOC1P02654 AC087623.3-201ENST00000607047 1098 ntBASIC17.68■□□□□ 0.42
APOC1P02654 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
APOC1P02654 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
APOC1P02654 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC17.68■□□□□ 0.42
APOC1P02654 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC17.68■□□□□ 0.42
APOC1P02654 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
APOC1P02654 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
APOC1P02654 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC17.67■□□□□ 0.42
APOC1P02654 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
APOC1P02654 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
APOC1P02654 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
APOC1P02654 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
APOC1P02654 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC17.67■□□□□ 0.42
APOC1P02654 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
APOC1P02654 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
APOC1P02654 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC17.67■□□□□ 0.42
APOC1P02654 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
APOC1P02654 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
APOC1P02654 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC17.67■□□□□ 0.42
APOC1P02654 HSCB-202ENST00000398941 955 ntTSL 2 BASIC17.67■□□□□ 0.42
APOC1P02654 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC17.67■□□□□ 0.42
APOC1P02654 VMO1-204ENST00000441199 741 ntTSL 2 BASIC17.67■□□□□ 0.42
APOC1P02654 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC17.67■□□□□ 0.42
APOC1P02654 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC17.67■□□□□ 0.42
APOC1P02654 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
APOC1P02654 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
APOC1P02654 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC17.67■□□□□ 0.42
APOC1P02654 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
APOC1P02654 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
APOC1P02654 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
APOC1P02654 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC17.67■□□□□ 0.42
APOC1P02654 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
APOC1P02654 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
APOC1P02654 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC17.66■□□□□ 0.42
APOC1P02654 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
APOC1P02654 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
APOC1P02654 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
APOC1P02654 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
APOC1P02654 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
APOC1P02654 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
APOC1P02654 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC17.66■□□□□ 0.42
APOC1P02654 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
APOC1P02654 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC17.66■□□□□ 0.42
APOC1P02654 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC17.66■□□□□ 0.42
APOC1P02654 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC17.66■□□□□ 0.42
APOC1P02654 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC17.66■□□□□ 0.42
APOC1P02654 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
APOC1P02654 AL356652.1-201ENST00000615962 565 ntBASIC17.66■□□□□ 0.42
APOC1P02654 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 19.5 ms