Protein–RNA interactions for Protein: P01903

HLA-DRA, HLA class II histocompatibility antigen, DR alpha chain, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRAP01903 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
HLA-DRAP01903 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC21.62■■□□□ 1.05
HLA-DRAP01903 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC21.62■■□□□ 1.05
HLA-DRAP01903 AC073130.3-201ENST00000624389 2278 ntBASIC21.62■■□□□ 1.05
HLA-DRAP01903 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
HLA-DRAP01903 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC21.62■■□□□ 1.05
HLA-DRAP01903 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
HLA-DRAP01903 AC023632.3-201ENST00000521633 145 ntBASIC21.62■■□□□ 1.05
HLA-DRAP01903 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC21.62■■□□□ 1.05
HLA-DRAP01903 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC21.62■■□□□ 1.05
HLA-DRAP01903 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC21.62■■□□□ 1.05
HLA-DRAP01903 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC21.62■■□□□ 1.05
HLA-DRAP01903 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC21.62■■□□□ 1.05
HLA-DRAP01903 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
HLA-DRAP01903 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
HLA-DRAP01903 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
HLA-DRAP01903 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC21.62■■□□□ 1.05
HLA-DRAP01903 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC21.61■■□□□ 1.05
HLA-DRAP01903 BX119927.1-201ENST00000636596 1552 ntBASIC21.61■■□□□ 1.05
HLA-DRAP01903 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC21.61■■□□□ 1.05
HLA-DRAP01903 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC21.61■■□□□ 1.05
HLA-DRAP01903 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC21.61■■□□□ 1.05
HLA-DRAP01903 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC21.61■■□□□ 1.05
HLA-DRAP01903 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
HLA-DRAP01903 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
HLA-DRAP01903 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC21.61■■□□□ 1.05
HLA-DRAP01903 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
HLA-DRAP01903 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC21.61■■□□□ 1.05
HLA-DRAP01903 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
HLA-DRAP01903 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC21.61■■□□□ 1.05
HLA-DRAP01903 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC21.61■■□□□ 1.05
HLA-DRAP01903 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC21.6■■□□□ 1.05
HLA-DRAP01903 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC21.6■■□□□ 1.05
HLA-DRAP01903 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC21.6■■□□□ 1.05
HLA-DRAP01903 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
HLA-DRAP01903 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC21.6■■□□□ 1.05
HLA-DRAP01903 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
HLA-DRAP01903 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
HLA-DRAP01903 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC21.6■■□□□ 1.05
HLA-DRAP01903 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC21.6■■□□□ 1.05
HLA-DRAP01903 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
HLA-DRAP01903 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC21.6■■□□□ 1.05
HLA-DRAP01903 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC21.6■■□□□ 1.05
HLA-DRAP01903 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
HLA-DRAP01903 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC21.6■■□□□ 1.05
HLA-DRAP01903 KRT8P20-201ENST00000423953 1409 ntBASIC21.6■■□□□ 1.05
HLA-DRAP01903 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC21.6■■□□□ 1.05
HLA-DRAP01903 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC21.6■■□□□ 1.05
HLA-DRAP01903 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
HLA-DRAP01903 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC21.6■■□□□ 1.05
HLA-DRAP01903 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
HLA-DRAP01903 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
HLA-DRAP01903 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
HLA-DRAP01903 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC21.6■■□□□ 1.05
HLA-DRAP01903 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
HLA-DRAP01903 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC21.59■■□□□ 1.05
HLA-DRAP01903 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC21.59■■□□□ 1.05
HLA-DRAP01903 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
HLA-DRAP01903 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
HLA-DRAP01903 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
HLA-DRAP01903 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
HLA-DRAP01903 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
HLA-DRAP01903 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
HLA-DRAP01903 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC21.59■■□□□ 1.05
HLA-DRAP01903 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
HLA-DRAP01903 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
HLA-DRAP01903 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC21.59■■□□□ 1.05
HLA-DRAP01903 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC21.59■■□□□ 1.05
HLA-DRAP01903 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC21.59■■□□□ 1.05
HLA-DRAP01903 AC112907.3-201ENST00000577781 2400 ntBASIC21.59■■□□□ 1.05
HLA-DRAP01903 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC21.59■■□□□ 1.05
HLA-DRAP01903 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC21.59■■□□□ 1.05
HLA-DRAP01903 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
HLA-DRAP01903 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC21.59■■□□□ 1.05
HLA-DRAP01903 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
HLA-DRAP01903 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC21.59■■□□□ 1.05
HLA-DRAP01903 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC21.59■■□□□ 1.05
HLA-DRAP01903 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC21.59■■□□□ 1.05
HLA-DRAP01903 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC21.58■■□□□ 1.05
HLA-DRAP01903 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC21.58■■□□□ 1.05
HLA-DRAP01903 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC21.58■■□□□ 1.05
HLA-DRAP01903 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
HLA-DRAP01903 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC21.58■■□□□ 1.05
HLA-DRAP01903 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
HLA-DRAP01903 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
HLA-DRAP01903 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC21.58■■□□□ 1.05
HLA-DRAP01903 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
HLA-DRAP01903 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC21.58■■□□□ 1.05
HLA-DRAP01903 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC21.58■■□□□ 1.05
HLA-DRAP01903 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
HLA-DRAP01903 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC21.58■■□□□ 1.05
HLA-DRAP01903 HLA-B-256ENST00000639848 1089 ntBASIC21.58■■□□□ 1.05
HLA-DRAP01903 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC21.58■■□□□ 1.04
HLA-DRAP01903 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
HLA-DRAP01903 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
HLA-DRAP01903 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC21.58■■□□□ 1.04
HLA-DRAP01903 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
HLA-DRAP01903 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC21.58■■□□□ 1.04
HLA-DRAP01903 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC21.58■■□□□ 1.04
HLA-DRAP01903 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 37.5 ms