Protein–RNA interactions for Protein: O95900

TRUB2, Mitochondrial mRNA pseudouridine synthase TRUB2, humanhuman

Known RBP Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRUB2O95900 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
TRUB2O95900 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC21.07■□□□□ 0.96
TRUB2O95900 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
TRUB2O95900 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
TRUB2O95900 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC21.06■□□□□ 0.96
TRUB2O95900 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
TRUB2O95900 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
TRUB2O95900 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC21.06■□□□□ 0.96
TRUB2O95900 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
TRUB2O95900 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
TRUB2O95900 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC21.06■□□□□ 0.96
TRUB2O95900 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
TRUB2O95900 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC21.06■□□□□ 0.96
TRUB2O95900 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
TRUB2O95900 MFF-205ENST00000354503 1085 ntTSL 2 BASIC21.06■□□□□ 0.96
TRUB2O95900 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC21.06■□□□□ 0.96
TRUB2O95900 GATS-209ENST00000454084 1030 ntTSL 3 BASIC21.06■□□□□ 0.96
TRUB2O95900 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
TRUB2O95900 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
TRUB2O95900 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
TRUB2O95900 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC21.06■□□□□ 0.96
TRUB2O95900 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC21.06■□□□□ 0.96
TRUB2O95900 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
TRUB2O95900 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC21.06■□□□□ 0.96
TRUB2O95900 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
TRUB2O95900 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
TRUB2O95900 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC21.06■□□□□ 0.96
TRUB2O95900 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
TRUB2O95900 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
TRUB2O95900 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC21.05■□□□□ 0.96
TRUB2O95900 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
TRUB2O95900 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
TRUB2O95900 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC21.05■□□□□ 0.96
TRUB2O95900 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
TRUB2O95900 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC21.05■□□□□ 0.96
TRUB2O95900 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
TRUB2O95900 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
TRUB2O95900 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC21.05■□□□□ 0.96
TRUB2O95900 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
TRUB2O95900 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC21.05■□□□□ 0.96
TRUB2O95900 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC21.05■□□□□ 0.96
TRUB2O95900 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
TRUB2O95900 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC21.05■□□□□ 0.96
TRUB2O95900 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC21.05■□□□□ 0.96
TRUB2O95900 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
TRUB2O95900 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC21.05■□□□□ 0.96
TRUB2O95900 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
TRUB2O95900 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
TRUB2O95900 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
TRUB2O95900 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
TRUB2O95900 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC21.05■□□□□ 0.96
TRUB2O95900 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
TRUB2O95900 H19-201ENST00000411754 1788 ntTSL 5 BASIC21.05■□□□□ 0.96
TRUB2O95900 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
TRUB2O95900 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC21.04■□□□□ 0.96
TRUB2O95900 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
TRUB2O95900 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC21.04■□□□□ 0.96
TRUB2O95900 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
TRUB2O95900 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
TRUB2O95900 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
TRUB2O95900 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
TRUB2O95900 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
TRUB2O95900 KRT18P6-201ENST00000555540 1265 ntBASIC21.04■□□□□ 0.96
TRUB2O95900 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC21.04■□□□□ 0.96
TRUB2O95900 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
TRUB2O95900 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC21.04■□□□□ 0.96
TRUB2O95900 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC21.04■□□□□ 0.96
TRUB2O95900 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
TRUB2O95900 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
TRUB2O95900 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC21.03■□□□□ 0.96
TRUB2O95900 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
TRUB2O95900 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
TRUB2O95900 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
TRUB2O95900 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
TRUB2O95900 CRK-204ENST00000574295 1391 ntTSL 5 BASIC21.03■□□□□ 0.96
TRUB2O95900 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
TRUB2O95900 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC21.03■□□□□ 0.96
TRUB2O95900 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC21.03■□□□□ 0.96
TRUB2O95900 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
TRUB2O95900 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
TRUB2O95900 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC21.03■□□□□ 0.96
TRUB2O95900 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
TRUB2O95900 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC21.03■□□□□ 0.96
TRUB2O95900 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
TRUB2O95900 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC21.03■□□□□ 0.96
TRUB2O95900 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
TRUB2O95900 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC21.03■□□□□ 0.96
TRUB2O95900 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
TRUB2O95900 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
TRUB2O95900 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
TRUB2O95900 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
TRUB2O95900 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
TRUB2O95900 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC21.02■□□□□ 0.96
TRUB2O95900 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
TRUB2O95900 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
TRUB2O95900 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC21.02■□□□□ 0.96
TRUB2O95900 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
TRUB2O95900 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
TRUB2O95900 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
TRUB2O95900 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 18.8 ms