Protein–RNA interactions for Protein: O95076

ALX3, Homeobox protein aristaless-like 3, humanhuman

Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALX3O95076 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC17.68■□□□□ 0.42
ALX3O95076 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
ALX3O95076 NME4-211ENST00000620944 1193 ntTSL 2 BASIC17.68■□□□□ 0.42
ALX3O95076 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
ALX3O95076 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC17.68■□□□□ 0.42
ALX3O95076 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
ALX3O95076 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
ALX3O95076 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
ALX3O95076 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC17.67■□□□□ 0.42
ALX3O95076 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
ALX3O95076 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
ALX3O95076 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
ALX3O95076 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC17.67■□□□□ 0.42
ALX3O95076 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
ALX3O95076 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
ALX3O95076 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC17.67■□□□□ 0.42
ALX3O95076 AC027612.3-201ENST00000413684 1047 ntBASIC17.67■□□□□ 0.42
ALX3O95076 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
ALX3O95076 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC17.67■□□□□ 0.42
ALX3O95076 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC17.67■□□□□ 0.42
ALX3O95076 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC17.67■□□□□ 0.42
ALX3O95076 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
ALX3O95076 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC17.67■□□□□ 0.42
ALX3O95076 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
ALX3O95076 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
ALX3O95076 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
ALX3O95076 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
ALX3O95076 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
ALX3O95076 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
ALX3O95076 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
ALX3O95076 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
ALX3O95076 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
ALX3O95076 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
ALX3O95076 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
ALX3O95076 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
ALX3O95076 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
ALX3O95076 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
ALX3O95076 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
ALX3O95076 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
ALX3O95076 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
ALX3O95076 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
ALX3O95076 IRS3P-201ENST00000223076 1006 ntBASIC17.66■□□□□ 0.42
ALX3O95076 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
ALX3O95076 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC17.66■□□□□ 0.42
ALX3O95076 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
ALX3O95076 AC010141.2-201ENST00000452426 721 ntBASIC17.66■□□□□ 0.42
ALX3O95076 SERP1-208ENST00000491660 830 ntTSL 2 BASIC17.66■□□□□ 0.42
ALX3O95076 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC17.66■□□□□ 0.42
ALX3O95076 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC17.66■□□□□ 0.42
ALX3O95076 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
ALX3O95076 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC17.66■□□□□ 0.42
ALX3O95076 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
ALX3O95076 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
ALX3O95076 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
ALX3O95076 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
ALX3O95076 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC17.66■□□□□ 0.42
ALX3O95076 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
ALX3O95076 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC17.65■□□□□ 0.42
ALX3O95076 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
ALX3O95076 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC17.65■□□□□ 0.42
ALX3O95076 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC17.65■□□□□ 0.42
ALX3O95076 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
ALX3O95076 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
ALX3O95076 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
ALX3O95076 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC17.65■□□□□ 0.42
ALX3O95076 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
ALX3O95076 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
ALX3O95076 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
ALX3O95076 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
ALX3O95076 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
ALX3O95076 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
ALX3O95076 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC17.65■□□□□ 0.42
ALX3O95076 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
ALX3O95076 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
ALX3O95076 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC17.64■□□□□ 0.41
ALX3O95076 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
ALX3O95076 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC17.64■□□□□ 0.41
ALX3O95076 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
ALX3O95076 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
ALX3O95076 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC17.64■□□□□ 0.41
ALX3O95076 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
ALX3O95076 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC17.64■□□□□ 0.41
ALX3O95076 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC17.64■□□□□ 0.41
ALX3O95076 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC17.64■□□□□ 0.41
ALX3O95076 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC17.64■□□□□ 0.41
ALX3O95076 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
ALX3O95076 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
ALX3O95076 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC17.63■□□□□ 0.41
ALX3O95076 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
ALX3O95076 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
ALX3O95076 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC17.63■□□□□ 0.41
ALX3O95076 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
ALX3O95076 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC17.63■□□□□ 0.41
ALX3O95076 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
ALX3O95076 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
ALX3O95076 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
ALX3O95076 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
ALX3O95076 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
ALX3O95076 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
ALX3O95076 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 35.6 ms