Protein–RNA interactions for Protein: O94993

SOX30, Transcription factor SOX-30, humanhuman

Predictions only

Length 753 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX30O94993 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SOX30O94993 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC18.66■□□□□ 0.58
SOX30O94993 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SOX30O94993 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SOX30O94993 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
SOX30O94993 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC18.66■□□□□ 0.58
SOX30O94993 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SOX30O94993 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
SOX30O94993 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC18.66■□□□□ 0.58
SOX30O94993 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SOX30O94993 CDCA4P2-201ENST00000441182 718 ntBASIC18.66■□□□□ 0.58
SOX30O94993 AC023632.3-201ENST00000521633 145 ntBASIC18.66■□□□□ 0.58
SOX30O94993 ISCU-212ENST00000547005 795 ntTSL 3 BASIC18.66■□□□□ 0.58
SOX30O94993 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
SOX30O94993 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC18.66■□□□□ 0.58
SOX30O94993 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC18.66■□□□□ 0.58
SOX30O94993 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC18.66■□□□□ 0.58
SOX30O94993 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
SOX30O94993 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
SOX30O94993 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC18.66■□□□□ 0.58
SOX30O94993 AC099778.1-201ENST00000568593 1911 ntBASIC18.66■□□□□ 0.58
SOX30O94993 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SOX30O94993 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC18.66■□□□□ 0.58
SOX30O94993 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
SOX30O94993 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SOX30O94993 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
SOX30O94993 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC18.66■□□□□ 0.58
SOX30O94993 AC007952.6-201ENST00000573168 2673 ntBASIC18.66■□□□□ 0.58
SOX30O94993 AC003957.1-201ENST00000625108 2673 ntBASIC18.66■□□□□ 0.58
SOX30O94993 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
SOX30O94993 KRT8P17-201ENST00000453110 1448 ntBASIC18.66■□□□□ 0.58
SOX30O94993 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
SOX30O94993 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
SOX30O94993 STK25-205ENST00000405883 1904 ntTSL 2 BASIC18.65■□□□□ 0.58
SOX30O94993 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC18.65■□□□□ 0.58
SOX30O94993 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC18.65■□□□□ 0.58
SOX30O94993 HLA-L-209ENST00000420110 1011 ntBASIC18.65■□□□□ 0.58
SOX30O94993 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC18.65■□□□□ 0.58
SOX30O94993 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC18.65■□□□□ 0.58
SOX30O94993 C2orf69P4-201ENST00000565394 541 ntBASIC18.65■□□□□ 0.58
SOX30O94993 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC18.65■□□□□ 0.58
SOX30O94993 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC18.65■□□□□ 0.58
SOX30O94993 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
SOX30O94993 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC18.65■□□□□ 0.58
SOX30O94993 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SOX30O94993 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SOX30O94993 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
SOX30O94993 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SOX30O94993 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
SOX30O94993 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC18.65■□□□□ 0.58
SOX30O94993 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SOX30O94993 KRT8P20-201ENST00000423953 1409 ntBASIC18.65■□□□□ 0.58
SOX30O94993 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC18.65■□□□□ 0.58
SOX30O94993 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.58
SOX30O94993 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
SOX30O94993 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
SOX30O94993 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.58
SOX30O94993 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
SOX30O94993 SMG8-203ENST00000578922 2178 ntBASIC18.64■□□□□ 0.57
SOX30O94993 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
SOX30O94993 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC18.64■□□□□ 0.57
SOX30O94993 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC18.64■□□□□ 0.57
SOX30O94993 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
SOX30O94993 LSM12P1-201ENST00000411836 588 ntBASIC18.64■□□□□ 0.57
SOX30O94993 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
SOX30O94993 OAS3-207ENST00000551007 998 ntTSL 2 BASIC18.64■□□□□ 0.57
SOX30O94993 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC18.64■□□□□ 0.57
SOX30O94993 AL031963.3-201ENST00000606441 850 ntBASIC18.64■□□□□ 0.57
SOX30O94993 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC18.64■□□□□ 0.57
SOX30O94993 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
SOX30O94993 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
SOX30O94993 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SOX30O94993 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC18.64■□□□□ 0.57
SOX30O94993 KRT16P6-202ENST00000425692 1426 ntBASIC18.64■□□□□ 0.57
SOX30O94993 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SOX30O94993 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
SOX30O94993 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SOX30O94993 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SOX30O94993 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC18.64■□□□□ 0.57
SOX30O94993 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC18.64■□□□□ 0.57
SOX30O94993 BX119927.1-201ENST00000636596 1552 ntBASIC18.64■□□□□ 0.57
SOX30O94993 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
SOX30O94993 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
SOX30O94993 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
SOX30O94993 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC18.63■□□□□ 0.57
SOX30O94993 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC18.63■□□□□ 0.57
SOX30O94993 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SOX30O94993 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
SOX30O94993 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC18.63■□□□□ 0.57
SOX30O94993 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC18.63■□□□□ 0.57
SOX30O94993 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SOX30O94993 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SOX30O94993 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SOX30O94993 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
SOX30O94993 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
SOX30O94993 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SOX30O94993 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC18.63■□□□□ 0.57
SOX30O94993 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC18.62■□□□□ 0.57
SOX30O94993 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
SOX30O94993 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 52 ms