Protein–RNA interactions for Protein: O76009

KRT33A, Keratin, type I cuticular Ha3-I, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT33AO76009 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
KRT33AO76009 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
KRT33AO76009 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
KRT33AO76009 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC18.15■□□□□ 0.5
KRT33AO76009 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
KRT33AO76009 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
KRT33AO76009 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
KRT33AO76009 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
KRT33AO76009 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
KRT33AO76009 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
KRT33AO76009 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
KRT33AO76009 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC18.15■□□□□ 0.5
KRT33AO76009 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
KRT33AO76009 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC18.15■□□□□ 0.5
KRT33AO76009 PPP1R14BP3-201ENST00000509033 445 ntBASIC18.15■□□□□ 0.5
KRT33AO76009 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC18.15■□□□□ 0.5
KRT33AO76009 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC18.15■□□□□ 0.5
KRT33AO76009 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC18.15■□□□□ 0.5
KRT33AO76009 AL121832.2-201ENST00000610979 668 ntBASIC18.15■□□□□ 0.5
KRT33AO76009 GXYLT1P5-201ENST00000614548 1189 ntBASIC18.15■□□□□ 0.5
KRT33AO76009 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC18.15■□□□□ 0.5
KRT33AO76009 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
KRT33AO76009 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC18.15■□□□□ 0.5
KRT33AO76009 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC18.15■□□□□ 0.5
KRT33AO76009 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
KRT33AO76009 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
KRT33AO76009 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
KRT33AO76009 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC18.15■□□□□ 0.5
KRT33AO76009 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC18.14■□□□□ 0.5
KRT33AO76009 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.5
KRT33AO76009 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.5
KRT33AO76009 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
KRT33AO76009 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
KRT33AO76009 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
KRT33AO76009 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
KRT33AO76009 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC18.14■□□□□ 0.49
KRT33AO76009 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
KRT33AO76009 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
KRT33AO76009 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
KRT33AO76009 PLK5-205ENST00000642079 1969 ntBASIC18.14■□□□□ 0.49
KRT33AO76009 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC18.14■□□□□ 0.49
KRT33AO76009 PGM5P4-201ENST00000421970 445 ntBASIC18.14■□□□□ 0.49
KRT33AO76009 VMO1-204ENST00000441199 741 ntTSL 2 BASIC18.14■□□□□ 0.49
KRT33AO76009 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC18.14■□□□□ 0.49
KRT33AO76009 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC18.14■□□□□ 0.49
KRT33AO76009 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
KRT33AO76009 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
KRT33AO76009 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC18.14■□□□□ 0.49
KRT33AO76009 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC18.14■□□□□ 0.49
KRT33AO76009 WT1-AS_3.1-201ENST00000613262 234 ntBASIC18.14■□□□□ 0.49
KRT33AO76009 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
KRT33AO76009 AC006128.1-201ENST00000624704 1661 ntBASIC18.14■□□□□ 0.49
KRT33AO76009 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
KRT33AO76009 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
KRT33AO76009 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
KRT33AO76009 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC18.14■□□□□ 0.49
KRT33AO76009 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
KRT33AO76009 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
KRT33AO76009 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
KRT33AO76009 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
KRT33AO76009 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
KRT33AO76009 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
KRT33AO76009 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
KRT33AO76009 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
KRT33AO76009 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
KRT33AO76009 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
KRT33AO76009 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC18.13■□□□□ 0.49
KRT33AO76009 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
KRT33AO76009 ERF-202ENST00000440177 2032 ntTSL 2 BASIC18.13■□□□□ 0.49
KRT33AO76009 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
KRT33AO76009 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
KRT33AO76009 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC18.13■□□□□ 0.49
KRT33AO76009 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC18.13■□□□□ 0.49
KRT33AO76009 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC18.13■□□□□ 0.49
KRT33AO76009 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
KRT33AO76009 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
KRT33AO76009 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
KRT33AO76009 GPX1P1-201ENST00000388829 606 ntBASIC18.13■□□□□ 0.49
KRT33AO76009 SLC29A4P1-201ENST00000398760 971 ntBASIC18.13■□□□□ 0.49
KRT33AO76009 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC18.13■□□□□ 0.49
KRT33AO76009 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC18.13■□□□□ 0.49
KRT33AO76009 AC133552.2-202ENST00000575694 574 ntBASIC18.13■□□□□ 0.49
KRT33AO76009 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC18.13■□□□□ 0.49
KRT33AO76009 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC18.13■□□□□ 0.49
KRT33AO76009 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
KRT33AO76009 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
KRT33AO76009 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
KRT33AO76009 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
KRT33AO76009 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC18.13■□□□□ 0.49
KRT33AO76009 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC18.13■□□□□ 0.49
KRT33AO76009 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC18.13■□□□□ 0.49
KRT33AO76009 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC18.13■□□□□ 0.49
KRT33AO76009 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
KRT33AO76009 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
KRT33AO76009 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC18.13■□□□□ 0.49
KRT33AO76009 AC073314.1-201ENST00000568729 2216 ntBASIC18.13■□□□□ 0.49
KRT33AO76009 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
KRT33AO76009 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC18.12■□□□□ 0.49
KRT33AO76009 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC18.12■□□□□ 0.49
KRT33AO76009 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 36.2 ms