Protein–RNA interactions for Protein: O75365

PTP4A3, Protein tyrosine phosphatase type IVA 3, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A3O75365 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PTP4A3O75365 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PTP4A3O75365 AC116562.4-201ENST00000641316 2276 ntBASIC18.09■□□□□ 0.49
PTP4A3O75365 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC18.08■□□□□ 0.49
PTP4A3O75365 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
PTP4A3O75365 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC18.08■□□□□ 0.49
PTP4A3O75365 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC18.08■□□□□ 0.49
PTP4A3O75365 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
PTP4A3O75365 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
PTP4A3O75365 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
PTP4A3O75365 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC18.08■□□□□ 0.48
PTP4A3O75365 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC18.08■□□□□ 0.48
PTP4A3O75365 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC18.08■□□□□ 0.48
PTP4A3O75365 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC18.08■□□□□ 0.48
PTP4A3O75365 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
PTP4A3O75365 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
PTP4A3O75365 HSCB-202ENST00000398941 955 ntTSL 2 BASIC18.08■□□□□ 0.48
PTP4A3O75365 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC18.08■□□□□ 0.48
PTP4A3O75365 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
PTP4A3O75365 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC18.08■□□□□ 0.48
PTP4A3O75365 RARRES2P4-201ENST00000514074 484 ntBASIC18.08■□□□□ 0.48
PTP4A3O75365 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
PTP4A3O75365 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.48
PTP4A3O75365 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC18.08■□□□□ 0.48
PTP4A3O75365 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
PTP4A3O75365 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
PTP4A3O75365 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.48
PTP4A3O75365 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.48
PTP4A3O75365 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
PTP4A3O75365 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.48
PTP4A3O75365 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC18.08■□□□□ 0.48
PTP4A3O75365 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
PTP4A3O75365 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC18.08■□□□□ 0.48
PTP4A3O75365 MOK-225ENST00000522867 1883 ntTSL 5 BASIC18.07■□□□□ 0.48
PTP4A3O75365 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC18.07■□□□□ 0.48
PTP4A3O75365 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PTP4A3O75365 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
PTP4A3O75365 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PTP4A3O75365 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC18.07■□□□□ 0.48
PTP4A3O75365 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PTP4A3O75365 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PTP4A3O75365 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PTP4A3O75365 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PTP4A3O75365 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
PTP4A3O75365 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PTP4A3O75365 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
PTP4A3O75365 DUX4L16-201ENST00000555130 1264 ntBASIC18.07■□□□□ 0.48
PTP4A3O75365 MFSD11-216ENST00000590393 1141 ntBASIC18.07■□□□□ 0.48
PTP4A3O75365 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
PTP4A3O75365 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC18.07■□□□□ 0.48
PTP4A3O75365 WWOX-218ENST00000627394 894 ntTSL 5 BASIC18.07■□□□□ 0.48
PTP4A3O75365 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
PTP4A3O75365 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
PTP4A3O75365 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PTP4A3O75365 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
PTP4A3O75365 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PTP4A3O75365 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
PTP4A3O75365 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
PTP4A3O75365 AC068338.2-201ENST00000563278 1430 ntBASIC18.06■□□□□ 0.48
PTP4A3O75365 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
PTP4A3O75365 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PTP4A3O75365 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PTP4A3O75365 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PTP4A3O75365 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PTP4A3O75365 MCRIP2P1-201ENST00000394346 511 ntBASIC18.06■□□□□ 0.48
PTP4A3O75365 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PTP4A3O75365 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC18.06■□□□□ 0.48
PTP4A3O75365 CNN2P6-201ENST00000439038 900 ntBASIC18.06■□□□□ 0.48
PTP4A3O75365 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC18.06■□□□□ 0.48
PTP4A3O75365 AC137761.2-201ENST00000561729 223 ntBASIC18.06■□□□□ 0.48
PTP4A3O75365 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC18.06■□□□□ 0.48
PTP4A3O75365 AC145350.3-201ENST00000569033 163 ntBASIC18.06■□□□□ 0.48
PTP4A3O75365 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC18.06■□□□□ 0.48
PTP4A3O75365 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PTP4A3O75365 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
PTP4A3O75365 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
PTP4A3O75365 TREX1-205ENST00000625293 1783 ntBASIC18.06■□□□□ 0.48
PTP4A3O75365 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC18.06■□□□□ 0.48
PTP4A3O75365 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC18.06■□□□□ 0.48
PTP4A3O75365 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC18.06■□□□□ 0.48
PTP4A3O75365 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
PTP4A3O75365 KRT8P17-201ENST00000453110 1448 ntBASIC18.06■□□□□ 0.48
PTP4A3O75365 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
PTP4A3O75365 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PTP4A3O75365 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC18.05■□□□□ 0.48
PTP4A3O75365 GAS2L1P2-201ENST00000436355 1356 ntBASIC18.05■□□□□ 0.48
PTP4A3O75365 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
PTP4A3O75365 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
PTP4A3O75365 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC18.05■□□□□ 0.48
PTP4A3O75365 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC18.05■□□□□ 0.48
PTP4A3O75365 KRT18P5-201ENST00000436075 1291 ntBASIC18.05■□□□□ 0.48
PTP4A3O75365 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
PTP4A3O75365 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC18.05■□□□□ 0.48
PTP4A3O75365 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC18.05■□□□□ 0.48
PTP4A3O75365 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC18.05■□□□□ 0.48
PTP4A3O75365 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
PTP4A3O75365 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
PTP4A3O75365 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC18.05■□□□□ 0.48
PTP4A3O75365 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PTP4A3O75365 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC18.05■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 23.5 ms