Protein–RNA interactions for Protein: O60232

SSSCA1, Sjoegren syndrome/scleroderma autoantigen 1, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1O60232 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
SSSCA1O60232 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
SSSCA1O60232 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC16.35■□□□□ 0.21
SSSCA1O60232 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC16.35■□□□□ 0.21
SSSCA1O60232 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
SSSCA1O60232 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC16.35■□□□□ 0.21
SSSCA1O60232 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
SSSCA1O60232 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC16.35■□□□□ 0.21
SSSCA1O60232 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
SSSCA1O60232 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
SSSCA1O60232 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC16.35■□□□□ 0.21
SSSCA1O60232 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
SSSCA1O60232 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
SSSCA1O60232 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
SSSCA1O60232 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
SSSCA1O60232 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC16.35■□□□□ 0.21
SSSCA1O60232 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
SSSCA1O60232 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC16.35■□□□□ 0.21
SSSCA1O60232 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC16.35■□□□□ 0.21
SSSCA1O60232 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC16.35■□□□□ 0.21
SSSCA1O60232 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
SSSCA1O60232 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
SSSCA1O60232 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
SSSCA1O60232 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
SSSCA1O60232 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
SSSCA1O60232 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
SSSCA1O60232 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
SSSCA1O60232 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC16.34■□□□□ 0.21
SSSCA1O60232 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC16.34■□□□□ 0.21
SSSCA1O60232 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
SSSCA1O60232 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
SSSCA1O60232 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
SSSCA1O60232 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
SSSCA1O60232 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC16.34■□□□□ 0.21
SSSCA1O60232 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
SSSCA1O60232 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
SSSCA1O60232 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
SSSCA1O60232 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
SSSCA1O60232 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
SSSCA1O60232 RPP21-222ENST00000433076 577 ntTSL 2 BASIC16.34■□□□□ 0.21
SSSCA1O60232 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC16.34■□□□□ 0.21
SSSCA1O60232 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC16.34■□□□□ 0.21
SSSCA1O60232 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC16.34■□□□□ 0.21
SSSCA1O60232 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
SSSCA1O60232 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
SSSCA1O60232 AC233992.3-201ENST00000607491 485 ntBASIC16.34■□□□□ 0.21
SSSCA1O60232 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
SSSCA1O60232 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
SSSCA1O60232 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
SSSCA1O60232 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
SSSCA1O60232 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC16.34■□□□□ 0.21
SSSCA1O60232 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
SSSCA1O60232 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC16.34■□□□□ 0.21
SSSCA1O60232 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC16.34■□□□□ 0.21
SSSCA1O60232 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC16.34■□□□□ 0.21
SSSCA1O60232 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
SSSCA1O60232 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC16.34■□□□□ 0.21
SSSCA1O60232 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC16.34■□□□□ 0.21
SSSCA1O60232 DPP3P2-201ENST00000416030 1696 ntBASIC16.34■□□□□ 0.21
SSSCA1O60232 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
SSSCA1O60232 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
SSSCA1O60232 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.21
SSSCA1O60232 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
SSSCA1O60232 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC16.33■□□□□ 0.21
SSSCA1O60232 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
SSSCA1O60232 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC16.33■□□□□ 0.21
SSSCA1O60232 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.21
SSSCA1O60232 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
SSSCA1O60232 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
SSSCA1O60232 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
SSSCA1O60232 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
SSSCA1O60232 LHPP-203ENST00000392757 840 ntTSL 3 BASIC16.33■□□□□ 0.2
SSSCA1O60232 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
SSSCA1O60232 GUSBP5-201ENST00000418136 578 ntBASIC16.33■□□□□ 0.2
SSSCA1O60232 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC16.33■□□□□ 0.2
SSSCA1O60232 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC16.33■□□□□ 0.2
SSSCA1O60232 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
SSSCA1O60232 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
SSSCA1O60232 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
SSSCA1O60232 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
SSSCA1O60232 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
SSSCA1O60232 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
SSSCA1O60232 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
SSSCA1O60232 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
SSSCA1O60232 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
SSSCA1O60232 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
SSSCA1O60232 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
SSSCA1O60232 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
SSSCA1O60232 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC16.33■□□□□ 0.2
SSSCA1O60232 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
SSSCA1O60232 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC16.33■□□□□ 0.2
SSSCA1O60232 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
SSSCA1O60232 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
SSSCA1O60232 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC16.33■□□□□ 0.2
SSSCA1O60232 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
SSSCA1O60232 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC16.33■□□□□ 0.2
SSSCA1O60232 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
SSSCA1O60232 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
SSSCA1O60232 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC16.32■□□□□ 0.2
SSSCA1O60232 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 23.3 ms