Protein–RNA interactions for Protein: O60225

SSX5, Protein SSX5, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX5O60225 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
SSX5O60225 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
SSX5O60225 AC090340.1-201ENST00000620778 4980 ntBASIC17.16■□□□□ 0.34
SSX5O60225 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
SSX5O60225 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
SSX5O60225 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
SSX5O60225 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC17.15■□□□□ 0.34
SSX5O60225 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
SSX5O60225 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SSX5O60225 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
SSX5O60225 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SSX5O60225 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
SSX5O60225 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
SSX5O60225 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SSX5O60225 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
SSX5O60225 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SSX5O60225 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
SSX5O60225 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
SSX5O60225 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
SSX5O60225 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SSX5O60225 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SSX5O60225 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
SSX5O60225 AC008175.2-201ENST00000612840 297 ntBASIC17.15■□□□□ 0.34
SSX5O60225 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
SSX5O60225 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SSX5O60225 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC17.15■□□□□ 0.34
SSX5O60225 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SSX5O60225 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SSX5O60225 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SSX5O60225 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC17.15■□□□□ 0.34
SSX5O60225 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
SSX5O60225 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
SSX5O60225 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SSX5O60225 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC17.14■□□□□ 0.34
SSX5O60225 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
SSX5O60225 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.34
SSX5O60225 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
SSX5O60225 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SSX5O60225 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
SSX5O60225 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SSX5O60225 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC17.14■□□□□ 0.33
SSX5O60225 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SSX5O60225 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC17.14■□□□□ 0.33
SSX5O60225 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC17.14■□□□□ 0.33
SSX5O60225 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
SSX5O60225 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC17.14■□□□□ 0.33
SSX5O60225 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
SSX5O60225 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC17.14■□□□□ 0.33
SSX5O60225 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC17.14■□□□□ 0.33
SSX5O60225 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC17.14■□□□□ 0.33
SSX5O60225 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC17.14■□□□□ 0.33
SSX5O60225 AC027682.1-201ENST00000562846 899 ntBASIC17.14■□□□□ 0.33
SSX5O60225 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC17.14■□□□□ 0.33
SSX5O60225 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC17.14■□□□□ 0.33
SSX5O60225 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC17.14■□□□□ 0.33
SSX5O60225 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SSX5O60225 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC17.14■□□□□ 0.33
SSX5O60225 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SSX5O60225 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
SSX5O60225 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
SSX5O60225 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
SSX5O60225 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SSX5O60225 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC17.13■□□□□ 0.33
SSX5O60225 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC17.13■□□□□ 0.33
SSX5O60225 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SSX5O60225 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC17.13■□□□□ 0.33
SSX5O60225 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
SSX5O60225 H19-201ENST00000411754 1788 ntTSL 5 BASIC17.13■□□□□ 0.33
SSX5O60225 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
SSX5O60225 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
SSX5O60225 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SSX5O60225 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC17.13■□□□□ 0.33
SSX5O60225 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SSX5O60225 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SSX5O60225 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SSX5O60225 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
SSX5O60225 TPRG1LP1-201ENST00000598702 760 ntBASIC17.13■□□□□ 0.33
SSX5O60225 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SSX5O60225 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SSX5O60225 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
SSX5O60225 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
SSX5O60225 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SSX5O60225 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC17.13■□□□□ 0.33
SSX5O60225 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SSX5O60225 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SSX5O60225 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
SSX5O60225 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SSX5O60225 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SSX5O60225 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
SSX5O60225 WAC-202ENST00000347934 2839 ntTSL 5 BASIC17.12■□□□□ 0.33
SSX5O60225 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
SSX5O60225 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SSX5O60225 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC17.12■□□□□ 0.33
SSX5O60225 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC17.12■□□□□ 0.33
SSX5O60225 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
SSX5O60225 AC245052.3-201ENST00000450182 901 ntBASIC17.12■□□□□ 0.33
SSX5O60225 AC012414.1-201ENST00000556676 535 ntBASIC17.12■□□□□ 0.33
SSX5O60225 MAG-206ENST00000597035 542 ntTSL 4 BASIC17.12■□□□□ 0.33
SSX5O60225 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC17.12■□□□□ 0.33
SSX5O60225 CPT2-209ENST00000636935 803 ntTSL 5 BASIC17.12■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 58.3 ms