Protein–RNA interactions for Protein: O43900

PRICKLE3, Prickle planar cell polarity protein 3, humanhuman

Predicted RBP Predictions only

Length 615 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRICKLE3O43900 ADM-205ENST00000528544 586 ntTSL 2 BASIC19.3■□□□□ 0.68
PRICKLE3O43900 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC19.3■□□□□ 0.68
PRICKLE3O43900 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
PRICKLE3O43900 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
PRICKLE3O43900 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
PRICKLE3O43900 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
PRICKLE3O43900 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
PRICKLE3O43900 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
PRICKLE3O43900 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC19.3■□□□□ 0.68
PRICKLE3O43900 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PRICKLE3O43900 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
PRICKLE3O43900 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
PRICKLE3O43900 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PRICKLE3O43900 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PRICKLE3O43900 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC19.29■□□□□ 0.68
PRICKLE3O43900 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
PRICKLE3O43900 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC19.29■□□□□ 0.68
PRICKLE3O43900 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC19.29■□□□□ 0.68
PRICKLE3O43900 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PRICKLE3O43900 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PRICKLE3O43900 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
PRICKLE3O43900 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC19.29■□□□□ 0.68
PRICKLE3O43900 HLA-G-202ENST00000376815 851 ntBASIC19.29■□□□□ 0.68
PRICKLE3O43900 HLA-G-203ENST00000376818 1127 ntBASIC19.29■□□□□ 0.68
PRICKLE3O43900 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PRICKLE3O43900 ESRRAP1-201ENST00000400596 1257 ntBASIC19.29■□□□□ 0.68
PRICKLE3O43900 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
PRICKLE3O43900 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
PRICKLE3O43900 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC19.29■□□□□ 0.68
PRICKLE3O43900 POU5F1P3-201ENST00000428824 1078 ntBASIC19.29■□□□□ 0.68
PRICKLE3O43900 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC19.29■□□□□ 0.68
PRICKLE3O43900 TSPY20P-201ENST00000450910 630 ntBASIC19.29■□□□□ 0.68
PRICKLE3O43900 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC19.29■□□□□ 0.68
PRICKLE3O43900 AP003097.1-201ENST00000530657 1135 ntBASIC19.29■□□□□ 0.68
PRICKLE3O43900 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
PRICKLE3O43900 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC19.29■□□□□ 0.68
PRICKLE3O43900 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC19.29■□□□□ 0.68
PRICKLE3O43900 AC120498.8-201ENST00000614275 531 ntBASIC19.29■□□□□ 0.68
PRICKLE3O43900 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC19.29■□□□□ 0.68
PRICKLE3O43900 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PRICKLE3O43900 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
PRICKLE3O43900 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC19.29■□□□□ 0.68
PRICKLE3O43900 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PRICKLE3O43900 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
PRICKLE3O43900 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
PRICKLE3O43900 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC19.28■□□□□ 0.68
PRICKLE3O43900 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
PRICKLE3O43900 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PRICKLE3O43900 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC19.28■□□□□ 0.68
PRICKLE3O43900 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
PRICKLE3O43900 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
PRICKLE3O43900 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC19.28■□□□□ 0.68
PRICKLE3O43900 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PRICKLE3O43900 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PRICKLE3O43900 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
PRICKLE3O43900 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
PRICKLE3O43900 AC008687.6-201ENST00000596318 630 ntBASIC19.28■□□□□ 0.68
PRICKLE3O43900 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC19.28■□□□□ 0.68
PRICKLE3O43900 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC19.28■□□□□ 0.68
PRICKLE3O43900 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC19.28■□□□□ 0.68
PRICKLE3O43900 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PRICKLE3O43900 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PRICKLE3O43900 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PRICKLE3O43900 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PRICKLE3O43900 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PRICKLE3O43900 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC19.28■□□□□ 0.68
PRICKLE3O43900 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PRICKLE3O43900 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
PRICKLE3O43900 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC19.27■□□□□ 0.68
PRICKLE3O43900 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
PRICKLE3O43900 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC19.27■□□□□ 0.68
PRICKLE3O43900 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
PRICKLE3O43900 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
PRICKLE3O43900 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
PRICKLE3O43900 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC19.27■□□□□ 0.68
PRICKLE3O43900 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC19.27■□□□□ 0.68
PRICKLE3O43900 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC19.27■□□□□ 0.68
PRICKLE3O43900 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
PRICKLE3O43900 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
PRICKLE3O43900 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC19.27■□□□□ 0.67
PRICKLE3O43900 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
PRICKLE3O43900 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
PRICKLE3O43900 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
PRICKLE3O43900 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC19.27■□□□□ 0.67
PRICKLE3O43900 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC19.27■□□□□ 0.67
PRICKLE3O43900 BX119927.1-201ENST00000636596 1552 ntBASIC19.27■□□□□ 0.67
PRICKLE3O43900 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.67
PRICKLE3O43900 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
PRICKLE3O43900 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC19.26■□□□□ 0.67
PRICKLE3O43900 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC19.26■□□□□ 0.67
PRICKLE3O43900 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PRICKLE3O43900 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PRICKLE3O43900 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC19.26■□□□□ 0.67
PRICKLE3O43900 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC19.26■□□□□ 0.67
PRICKLE3O43900 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC19.26■□□□□ 0.67
PRICKLE3O43900 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC19.26■□□□□ 0.67
PRICKLE3O43900 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC19.26■□□□□ 0.67
PRICKLE3O43900 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PRICKLE3O43900 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
PRICKLE3O43900 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 65.9 ms