Protein–RNA interactions for Protein: O43353

RIPK2, Receptor-interacting serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK2O43353 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC20.38■□□□□ 0.85
RIPK2O43353 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
RIPK2O43353 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
RIPK2O43353 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC20.38■□□□□ 0.85
RIPK2O43353 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC20.38■□□□□ 0.85
RIPK2O43353 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC20.38■□□□□ 0.85
RIPK2O43353 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
RIPK2O43353 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
RIPK2O43353 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC20.38■□□□□ 0.85
RIPK2O43353 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
RIPK2O43353 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
RIPK2O43353 AC007322.3-201ENST00000426526 701 ntBASIC20.38■□□□□ 0.85
RIPK2O43353 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC20.38■□□□□ 0.85
RIPK2O43353 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
RIPK2O43353 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC20.38■□□□□ 0.85
RIPK2O43353 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC20.38■□□□□ 0.85
RIPK2O43353 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
RIPK2O43353 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
RIPK2O43353 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC20.38■□□□□ 0.85
RIPK2O43353 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
RIPK2O43353 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC20.38■□□□□ 0.85
RIPK2O43353 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
RIPK2O43353 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
RIPK2O43353 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
RIPK2O43353 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
RIPK2O43353 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
RIPK2O43353 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC20.37■□□□□ 0.85
RIPK2O43353 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
RIPK2O43353 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC20.37■□□□□ 0.85
RIPK2O43353 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC20.37■□□□□ 0.85
RIPK2O43353 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
RIPK2O43353 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
RIPK2O43353 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC20.37■□□□□ 0.85
RIPK2O43353 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
RIPK2O43353 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
RIPK2O43353 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
RIPK2O43353 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
RIPK2O43353 DUX4L2-201ENST00000561772 1275 ntBASIC20.37■□□□□ 0.85
RIPK2O43353 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC20.37■□□□□ 0.85
RIPK2O43353 AL358852.1-201ENST00000623174 1268 ntBASIC20.37■□□□□ 0.85
RIPK2O43353 DUX4L6-201ENST00000626483 1275 ntBASIC20.37■□□□□ 0.85
RIPK2O43353 DUX4L1-201ENST00000627662 1275 ntBASIC20.37■□□□□ 0.85
RIPK2O43353 DUX4L8-201ENST00000629013 1275 ntBASIC20.37■□□□□ 0.85
RIPK2O43353 DUX4L3-201ENST00000630187 1275 ntBASIC20.37■□□□□ 0.85
RIPK2O43353 DUX4L7-201ENST00000630678 1275 ntBASIC20.37■□□□□ 0.85
RIPK2O43353 DUX4L5-201ENST00000630834 1275 ntBASIC20.37■□□□□ 0.85
RIPK2O43353 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC20.37■□□□□ 0.85
RIPK2O43353 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC20.37■□□□□ 0.85
RIPK2O43353 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC20.37■□□□□ 0.85
RIPK2O43353 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
RIPK2O43353 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC20.37■□□□□ 0.85
RIPK2O43353 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
RIPK2O43353 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC20.37■□□□□ 0.85
RIPK2O43353 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
RIPK2O43353 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
RIPK2O43353 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
RIPK2O43353 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC20.36■□□□□ 0.85
RIPK2O43353 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
RIPK2O43353 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC20.36■□□□□ 0.85
RIPK2O43353 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
RIPK2O43353 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
RIPK2O43353 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC20.36■□□□□ 0.85
RIPK2O43353 FAM21FP-204ENST00000608637 956 ntBASIC20.36■□□□□ 0.85
RIPK2O43353 FGF8-207ENST00000618991 856 ntTSL 3 BASIC20.36■□□□□ 0.85
RIPK2O43353 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC20.36■□□□□ 0.85
RIPK2O43353 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
RIPK2O43353 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
RIPK2O43353 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
RIPK2O43353 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
RIPK2O43353 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
RIPK2O43353 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC20.36■□□□□ 0.85
RIPK2O43353 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
RIPK2O43353 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
RIPK2O43353 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
RIPK2O43353 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
RIPK2O43353 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
RIPK2O43353 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC20.35■□□□□ 0.85
RIPK2O43353 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC20.35■□□□□ 0.85
RIPK2O43353 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC20.35■□□□□ 0.85
RIPK2O43353 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
RIPK2O43353 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC20.35■□□□□ 0.85
RIPK2O43353 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC20.35■□□□□ 0.85
RIPK2O43353 IRS3P-201ENST00000223076 1006 ntBASIC20.35■□□□□ 0.85
RIPK2O43353 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
RIPK2O43353 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
RIPK2O43353 AL136967.2-201ENST00000623968 743 ntBASIC20.35■□□□□ 0.85
RIPK2O43353 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
RIPK2O43353 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
RIPK2O43353 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC20.35■□□□□ 0.85
RIPK2O43353 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
RIPK2O43353 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC20.35■□□□□ 0.85
RIPK2O43353 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
RIPK2O43353 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
RIPK2O43353 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
RIPK2O43353 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC20.35■□□□□ 0.85
RIPK2O43353 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC20.35■□□□□ 0.85
RIPK2O43353 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
RIPK2O43353 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC20.34■□□□□ 0.85
RIPK2O43353 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
RIPK2O43353 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 58 ms