Protein–RNA interactions for Protein: O00443

PIK3C2A, Phosphatidylinositol 4-phosphate 3-kinase C2 domain-containing subunit alpha, humanhuman

Predictions only

Length 1,686 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PIK3C2AO00443 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC27.15■■□□□ 1.94
PIK3C2AO00443 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC27.15■■□□□ 1.94
PIK3C2AO00443 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC27.14■■□□□ 1.94
PIK3C2AO00443 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC27.14■■□□□ 1.94
PIK3C2AO00443 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC27.14■■□□□ 1.94
PIK3C2AO00443 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC27.14■■□□□ 1.94
PIK3C2AO00443 AC004264.1-201ENST00000608354 794 ntBASIC27.14■■□□□ 1.94
PIK3C2AO00443 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC27.14■■□□□ 1.94
PIK3C2AO00443 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC27.14■■□□□ 1.94
PIK3C2AO00443 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC27.14■■□□□ 1.94
PIK3C2AO00443 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC27.14■■□□□ 1.94
PIK3C2AO00443 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC27.14■■□□□ 1.94
PIK3C2AO00443 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC27.14■■□□□ 1.94
PIK3C2AO00443 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC27.14■■□□□ 1.94
PIK3C2AO00443 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC27.14■■□□□ 1.93
PIK3C2AO00443 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC27.14■■□□□ 1.93
PIK3C2AO00443 KRT18P35-201ENST00000510488 1269 ntBASIC27.14■■□□□ 1.93
PIK3C2AO00443 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC27.14■■□□□ 1.93
PIK3C2AO00443 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC27.14■■□□□ 1.93
PIK3C2AO00443 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC27.14■■□□□ 1.93
PIK3C2AO00443 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC27.14■■□□□ 1.93
PIK3C2AO00443 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC27.13■■□□□ 1.93
PIK3C2AO00443 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC27.13■■□□□ 1.93
PIK3C2AO00443 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC27.13■■□□□ 1.93
PIK3C2AO00443 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC27.13■■□□□ 1.93
PIK3C2AO00443 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC27.13■■□□□ 1.93
PIK3C2AO00443 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC27.13■■□□□ 1.93
PIK3C2AO00443 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC27.13■■□□□ 1.93
PIK3C2AO00443 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC27.13■■□□□ 1.93
PIK3C2AO00443 AP002982.1-201ENST00000492365 877 ntBASIC27.13■■□□□ 1.93
PIK3C2AO00443 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC27.13■■□□□ 1.93
PIK3C2AO00443 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC27.13■■□□□ 1.93
PIK3C2AO00443 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC27.13■■□□□ 1.93
PIK3C2AO00443 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC27.13■■□□□ 1.93
PIK3C2AO00443 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC27.13■■□□□ 1.93
PIK3C2AO00443 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC27.13■■□□□ 1.93
PIK3C2AO00443 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC27.13■■□□□ 1.93
PIK3C2AO00443 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC27.13■■□□□ 1.93
PIK3C2AO00443 KRT8P20-201ENST00000423953 1409 ntBASIC27.13■■□□□ 1.93
PIK3C2AO00443 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC27.13■■□□□ 1.93
PIK3C2AO00443 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC27.13■■□□□ 1.93
PIK3C2AO00443 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC27.13■■□□□ 1.93
PIK3C2AO00443 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC27.12■■□□□ 1.93
PIK3C2AO00443 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC27.12■■□□□ 1.93
PIK3C2AO00443 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC27.12■■□□□ 1.93
PIK3C2AO00443 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC27.12■■□□□ 1.93
PIK3C2AO00443 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC27.12■■□□□ 1.93
PIK3C2AO00443 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC27.12■■□□□ 1.93
PIK3C2AO00443 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC27.12■■□□□ 1.93
PIK3C2AO00443 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC27.12■■□□□ 1.93
PIK3C2AO00443 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC27.11■■□□□ 1.93
PIK3C2AO00443 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC27.11■■□□□ 1.93
PIK3C2AO00443 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC27.11■■□□□ 1.93
PIK3C2AO00443 GLDC-219ENST00000640208 420 ntTSL 2 BASIC27.11■■□□□ 1.93
PIK3C2AO00443 AC092865.7-201ENST00000641832 219 ntBASIC27.11■■□□□ 1.93
PIK3C2AO00443 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC27.11■■□□□ 1.93
PIK3C2AO00443 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC27.11■■□□□ 1.93
PIK3C2AO00443 FEM1AP4-201ENST00000443167 1987 ntBASIC27.11■■□□□ 1.93
PIK3C2AO00443 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC27.11■■□□□ 1.93
PIK3C2AO00443 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC27.11■■□□□ 1.93
PIK3C2AO00443 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC27.11■■□□□ 1.93
PIK3C2AO00443 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC27.11■■□□□ 1.93
PIK3C2AO00443 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC27.11■■□□□ 1.93
PIK3C2AO00443 KSR1P1-201ENST00000446298 240 ntBASIC27.11■■□□□ 1.93
PIK3C2AO00443 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC27.11■■□□□ 1.93
PIK3C2AO00443 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC27.1■■□□□ 1.93
PIK3C2AO00443 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC27.1■■□□□ 1.93
PIK3C2AO00443 AC121338.2-201ENST00000622535 1744 ntBASIC27.1■■□□□ 1.93
PIK3C2AO00443 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC27.1■■□□□ 1.93
PIK3C2AO00443 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC27.1■■□□□ 1.93
PIK3C2AO00443 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC27.1■■□□□ 1.93
PIK3C2AO00443 CYP2D8P-201ENST00000433633 1490 ntBASIC27.1■■□□□ 1.93
PIK3C2AO00443 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC27.1■■□□□ 1.93
PIK3C2AO00443 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
PIK3C2AO00443 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC27.09■■□□□ 1.93
PIK3C2AO00443 KRT18P57-201ENST00000443599 1254 ntBASIC27.09■■□□□ 1.93
PIK3C2AO00443 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC27.09■■□□□ 1.93
PIK3C2AO00443 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC27.09■■□□□ 1.93
PIK3C2AO00443 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
PIK3C2AO00443 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC27.09■■□□□ 1.93
PIK3C2AO00443 CALM3-202ENST00000391918 702 ntTSL 2 BASIC27.08■■□□□ 1.93
PIK3C2AO00443 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC27.08■■□□□ 1.93
PIK3C2AO00443 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC27.08■■□□□ 1.93
PIK3C2AO00443 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC27.08■■□□□ 1.93
PIK3C2AO00443 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC27.08■■□□□ 1.93
PIK3C2AO00443 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC27.08■■□□□ 1.93
PIK3C2AO00443 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC27.08■■□□□ 1.93
PIK3C2AO00443 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC27.08■■□□□ 1.93
PIK3C2AO00443 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC27.08■■□□□ 1.93
PIK3C2AO00443 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC27.08■■□□□ 1.93
PIK3C2AO00443 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC27.08■■□□□ 1.92
PIK3C2AO00443 MIR1238-201ENST00000408483 83 ntBASIC27.08■■□□□ 1.92
PIK3C2AO00443 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC27.08■■□□□ 1.92
PIK3C2AO00443 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC27.08■■□□□ 1.92
PIK3C2AO00443 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC27.08■■□□□ 1.92
PIK3C2AO00443 AC010947.1-201ENST00000623454 693 ntBASIC27.08■■□□□ 1.92
PIK3C2AO00443 EP400NL-214ENST00000641289 2402 ntBASIC27.07■■□□□ 1.92
PIK3C2AO00443 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC27.07■■□□□ 1.92
PIK3C2AO00443 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC27.07■■□□□ 1.92
PIK3C2AO00443 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC27.07■■□□□ 1.92
Retrieved 100 of 98,524 protein–RNA pairs in 18.7 ms