Protein–RNA interactions for Protein: H3BT56

CHKB-CPT1B, CHKB-CPT1B readthrough (NMD candidate) (Fragment), humanhuman

Predictions only

Length 60 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-CPT1BH3BT56 ANK1-201ENST00000265709 6379 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
CHKB-CPT1BH3BT56 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC11.2□□□□□ -0.62
CHKB-CPT1BH3BT56 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
CHKB-CPT1BH3BT56 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
CHKB-CPT1BH3BT56 AFDN-203ENST00000366806 5962 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
CHKB-CPT1BH3BT56 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
CHKB-CPT1BH3BT56 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
CHKB-CPT1BH3BT56 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC11.2□□□□□ -0.62
CHKB-CPT1BH3BT56 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC11.2□□□□□ -0.62
CHKB-CPT1BH3BT56 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC11.2□□□□□ -0.62
CHKB-CPT1BH3BT56 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC11.2□□□□□ -0.62
CHKB-CPT1BH3BT56 SYNRG-217ENST00000612223 8229 ntAPPRIS P4 TSL 1 (best) BASIC11.2□□□□□ -0.62
CHKB-CPT1BH3BT56 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
CHKB-CPT1BH3BT56 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC11.2□□□□□ -0.62
CHKB-CPT1BH3BT56 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC11.2□□□□□ -0.62
CHKB-CPT1BH3BT56 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
CHKB-CPT1BH3BT56 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
CHKB-CPT1BH3BT56 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC11.2□□□□□ -0.62
CHKB-CPT1BH3BT56 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
CHKB-CPT1BH3BT56 IRAK3-201ENST00000261233 8663 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
CHKB-CPT1BH3BT56 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
CHKB-CPT1BH3BT56 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
CHKB-CPT1BH3BT56 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC11.2□□□□□ -0.62
CHKB-CPT1BH3BT56 NRXN1-222ENST00000625672 8113 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
CHKB-CPT1BH3BT56 PLIN4-201ENST00000301286 6353 ntAPPRIS P2 TSL 5 BASIC11.2□□□□□ -0.62
CHKB-CPT1BH3BT56 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
CHKB-CPT1BH3BT56 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
CHKB-CPT1BH3BT56 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
CHKB-CPT1BH3BT56 TAP2-201ENST00000374897 5684 ntAPPRIS P2 TSL 1 (best) BASIC11.2□□□□□ -0.62
CHKB-CPT1BH3BT56 KNDC1-201ENST00000304613 6793 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
CHKB-CPT1BH3BT56 MBOAT2-201ENST00000305997 7751 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
CHKB-CPT1BH3BT56 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
CHKB-CPT1BH3BT56 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC11.2□□□□□ -0.62
CHKB-CPT1BH3BT56 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC11.2□□□□□ -0.62
CHKB-CPT1BH3BT56 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC11.2□□□□□ -0.62
CHKB-CPT1BH3BT56 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC11.19□□□□□ -0.62
CHKB-CPT1BH3BT56 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
CHKB-CPT1BH3BT56 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
CHKB-CPT1BH3BT56 MYLK-201ENST00000346322 5892 ntAPPRIS ALT2 TSL 5 BASIC11.19□□□□□ -0.62
CHKB-CPT1BH3BT56 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
CHKB-CPT1BH3BT56 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
CHKB-CPT1BH3BT56 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
CHKB-CPT1BH3BT56 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
CHKB-CPT1BH3BT56 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
CHKB-CPT1BH3BT56 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC11.19□□□□□ -0.62
CHKB-CPT1BH3BT56 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC11.19□□□□□ -0.62
CHKB-CPT1BH3BT56 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC11.19□□□□□ -0.62
CHKB-CPT1BH3BT56 ANKRD11-203ENST00000378330 9132 ntAPPRIS P2 TSL 1 (best) BASIC11.19□□□□□ -0.62
CHKB-CPT1BH3BT56 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
CHKB-CPT1BH3BT56 AC087742.1-201ENST00000575880 1738 ntBASIC11.19□□□□□ -0.62
CHKB-CPT1BH3BT56 MYO3A-201ENST00000265944 5581 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
CHKB-CPT1BH3BT56 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
CHKB-CPT1BH3BT56 UMODL1-203ENST00000400424 5516 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
CHKB-CPT1BH3BT56 PAK6-202ENST00000455577 4215 ntTSL 2 BASIC11.19□□□□□ -0.62
CHKB-CPT1BH3BT56 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC11.19□□□□□ -0.62
CHKB-CPT1BH3BT56 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
CHKB-CPT1BH3BT56 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
CHKB-CPT1BH3BT56 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC11.19□□□□□ -0.62
CHKB-CPT1BH3BT56 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC11.19□□□□□ -0.62
CHKB-CPT1BH3BT56 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC11.19□□□□□ -0.62
CHKB-CPT1BH3BT56 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC11.19□□□□□ -0.62
CHKB-CPT1BH3BT56 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
CHKB-CPT1BH3BT56 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC11.19□□□□□ -0.62
CHKB-CPT1BH3BT56 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
CHKB-CPT1BH3BT56 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC11.19□□□□□ -0.62
CHKB-CPT1BH3BT56 SMARCA2-204ENST00000357248 5855 ntAPPRIS P1 TSL 5 BASIC11.19□□□□□ -0.62
CHKB-CPT1BH3BT56 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC11.19□□□□□ -0.62
CHKB-CPT1BH3BT56 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
CHKB-CPT1BH3BT56 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC11.18□□□□□ -0.62
CHKB-CPT1BH3BT56 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
CHKB-CPT1BH3BT56 MPLKIP-201ENST00000306984 7668 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
CHKB-CPT1BH3BT56 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
CHKB-CPT1BH3BT56 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC11.18□□□□□ -0.62
CHKB-CPT1BH3BT56 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC11.18□□□□□ -0.62
CHKB-CPT1BH3BT56 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC11.18□□□□□ -0.62
CHKB-CPT1BH3BT56 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC11.18□□□□□ -0.62
CHKB-CPT1BH3BT56 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC11.18□□□□□ -0.62
CHKB-CPT1BH3BT56 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
CHKB-CPT1BH3BT56 AL049812.1-201ENST00000432563 2267 ntBASIC11.18□□□□□ -0.62
CHKB-CPT1BH3BT56 AC144652.1-201ENST00000609974 1624 ntBASIC11.18□□□□□ -0.62
CHKB-CPT1BH3BT56 FUNDC2-201ENST00000369498 6455 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
CHKB-CPT1BH3BT56 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
CHKB-CPT1BH3BT56 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC11.18□□□□□ -0.62
CHKB-CPT1BH3BT56 ARTN-201ENST00000372354 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
CHKB-CPT1BH3BT56 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC11.18□□□□□ -0.62
CHKB-CPT1BH3BT56 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC11.18□□□□□ -0.62
CHKB-CPT1BH3BT56 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC11.18□□□□□ -0.62
CHKB-CPT1BH3BT56 HNRNPU-226ENST00000640218 6858 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
CHKB-CPT1BH3BT56 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC11.18□□□□□ -0.62
CHKB-CPT1BH3BT56 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC11.18□□□□□ -0.62
CHKB-CPT1BH3BT56 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC11.18□□□□□ -0.62
CHKB-CPT1BH3BT56 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
CHKB-CPT1BH3BT56 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC11.18□□□□□ -0.62
CHKB-CPT1BH3BT56 TNRC18P3-201ENST00000441896 2691 ntBASIC11.18□□□□□ -0.62
CHKB-CPT1BH3BT56 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC11.18□□□□□ -0.62
CHKB-CPT1BH3BT56 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC11.18□□□□□ -0.62
CHKB-CPT1BH3BT56 JADE2-203ENST00000395003 6465 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
CHKB-CPT1BH3BT56 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
CHKB-CPT1BH3BT56 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC11.18□□□□□ -0.62
CHKB-CPT1BH3BT56 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC11.18□□□□□ -0.62
Retrieved 100 of 98,524 protein–RNA pairs in 49 ms