Protein–RNA interactions for Protein: A6NHC0

CAPN8, Calpain-8, humanhuman

Predictions only

Length 703 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN8A6NHC0 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
CAPN8A6NHC0 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CAPN8A6NHC0 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC20.35■□□□□ 0.85
CAPN8A6NHC0 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
CAPN8A6NHC0 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CAPN8A6NHC0 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
CAPN8A6NHC0 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
CAPN8A6NHC0 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
CAPN8A6NHC0 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
CAPN8A6NHC0 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC20.34■□□□□ 0.85
CAPN8A6NHC0 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
CAPN8A6NHC0 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
CAPN8A6NHC0 NXN-202ENST00000537628 1340 ntTSL 3 BASIC20.34■□□□□ 0.85
CAPN8A6NHC0 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
CAPN8A6NHC0 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
CAPN8A6NHC0 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
CAPN8A6NHC0 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
CAPN8A6NHC0 STK25-205ENST00000405883 1904 ntTSL 2 BASIC20.34■□□□□ 0.85
CAPN8A6NHC0 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CAPN8A6NHC0 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC20.34■□□□□ 0.85
CAPN8A6NHC0 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CAPN8A6NHC0 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
CAPN8A6NHC0 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
CAPN8A6NHC0 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
CAPN8A6NHC0 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
CAPN8A6NHC0 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CAPN8A6NHC0 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
CAPN8A6NHC0 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC20.34■□□□□ 0.85
CAPN8A6NHC0 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
CAPN8A6NHC0 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
CAPN8A6NHC0 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC20.34■□□□□ 0.85
CAPN8A6NHC0 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC20.34■□□□□ 0.85
CAPN8A6NHC0 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
CAPN8A6NHC0 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
CAPN8A6NHC0 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CAPN8A6NHC0 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC20.33■□□□□ 0.85
CAPN8A6NHC0 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC20.33■□□□□ 0.85
CAPN8A6NHC0 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
CAPN8A6NHC0 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC20.33■□□□□ 0.85
CAPN8A6NHC0 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
CAPN8A6NHC0 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC20.33■□□□□ 0.85
CAPN8A6NHC0 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC20.33■□□□□ 0.85
CAPN8A6NHC0 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
CAPN8A6NHC0 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
CAPN8A6NHC0 C2orf69P4-201ENST00000565394 541 ntBASIC20.33■□□□□ 0.85
CAPN8A6NHC0 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.84
CAPN8A6NHC0 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.84
CAPN8A6NHC0 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
CAPN8A6NHC0 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
CAPN8A6NHC0 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC20.33■□□□□ 0.84
CAPN8A6NHC0 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
CAPN8A6NHC0 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC20.33■□□□□ 0.84
CAPN8A6NHC0 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
CAPN8A6NHC0 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC20.33■□□□□ 0.84
CAPN8A6NHC0 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CAPN8A6NHC0 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC20.32■□□□□ 0.84
CAPN8A6NHC0 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
CAPN8A6NHC0 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC20.32■□□□□ 0.84
CAPN8A6NHC0 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CAPN8A6NHC0 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC20.32■□□□□ 0.84
CAPN8A6NHC0 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CAPN8A6NHC0 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC20.32■□□□□ 0.84
CAPN8A6NHC0 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
CAPN8A6NHC0 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CAPN8A6NHC0 NME6-213ENST00000451657 871 ntTSL 2 BASIC20.32■□□□□ 0.84
CAPN8A6NHC0 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC20.32■□□□□ 0.84
CAPN8A6NHC0 AC097658.1-201ENST00000475555 843 ntBASIC20.32■□□□□ 0.84
CAPN8A6NHC0 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC20.32■□□□□ 0.84
CAPN8A6NHC0 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC20.32■□□□□ 0.84
CAPN8A6NHC0 AC083880.1-201ENST00000608266 535 ntBASIC20.32■□□□□ 0.84
CAPN8A6NHC0 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CAPN8A6NHC0 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC20.32■□□□□ 0.84
CAPN8A6NHC0 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CAPN8A6NHC0 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC20.32■□□□□ 0.84
CAPN8A6NHC0 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC20.32■□□□□ 0.84
CAPN8A6NHC0 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CAPN8A6NHC0 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC20.32■□□□□ 0.84
CAPN8A6NHC0 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC20.31■□□□□ 0.84
CAPN8A6NHC0 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
CAPN8A6NHC0 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
CAPN8A6NHC0 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CAPN8A6NHC0 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
CAPN8A6NHC0 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CAPN8A6NHC0 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC20.31■□□□□ 0.84
CAPN8A6NHC0 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
CAPN8A6NHC0 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
CAPN8A6NHC0 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC20.31■□□□□ 0.84
CAPN8A6NHC0 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC20.31■□□□□ 0.84
CAPN8A6NHC0 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
CAPN8A6NHC0 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC20.31■□□□□ 0.84
CAPN8A6NHC0 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC20.31■□□□□ 0.84
CAPN8A6NHC0 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC20.31■□□□□ 0.84
CAPN8A6NHC0 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC20.31■□□□□ 0.84
CAPN8A6NHC0 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
CAPN8A6NHC0 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
CAPN8A6NHC0 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC20.3■□□□□ 0.84
CAPN8A6NHC0 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CAPN8A6NHC0 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
CAPN8A6NHC0 AC092720.2-201ENST00000602388 1665 ntBASIC20.3■□□□□ 0.84
CAPN8A6NHC0 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 22 ms