Protein–RNA interactions for Protein: A6NGN4

PRAMEF25, PRAME family member 25, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF25A6NGN4 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC18.82■□□□□ 0.6
PRAMEF25A6NGN4 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
PRAMEF25A6NGN4 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PRAMEF25A6NGN4 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
PRAMEF25A6NGN4 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PRAMEF25A6NGN4 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PRAMEF25A6NGN4 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC18.82■□□□□ 0.6
PRAMEF25A6NGN4 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PRAMEF25A6NGN4 SLC29A4P1-201ENST00000398760 971 ntBASIC18.82■□□□□ 0.6
PRAMEF25A6NGN4 HLA-L-209ENST00000420110 1011 ntBASIC18.82■□□□□ 0.6
PRAMEF25A6NGN4 PHB2-213ENST00000546111 858 ntTSL 2 BASIC18.82■□□□□ 0.6
PRAMEF25A6NGN4 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC18.82■□□□□ 0.6
PRAMEF25A6NGN4 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC18.82■□□□□ 0.6
PRAMEF25A6NGN4 MKRN4P-201ENST00000444706 1521 ntBASIC18.82■□□□□ 0.6
PRAMEF25A6NGN4 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
PRAMEF25A6NGN4 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
PRAMEF25A6NGN4 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
PRAMEF25A6NGN4 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PRAMEF25A6NGN4 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
PRAMEF25A6NGN4 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PRAMEF25A6NGN4 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PRAMEF25A6NGN4 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC18.81■□□□□ 0.6
PRAMEF25A6NGN4 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC18.81■□□□□ 0.6
PRAMEF25A6NGN4 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PRAMEF25A6NGN4 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PRAMEF25A6NGN4 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
PRAMEF25A6NGN4 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC18.81■□□□□ 0.6
PRAMEF25A6NGN4 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
PRAMEF25A6NGN4 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
PRAMEF25A6NGN4 TSPY6P-201ENST00000448518 926 ntBASIC18.81■□□□□ 0.6
PRAMEF25A6NGN4 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC18.81■□□□□ 0.6
PRAMEF25A6NGN4 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC18.81■□□□□ 0.6
PRAMEF25A6NGN4 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
PRAMEF25A6NGN4 ISCU-212ENST00000547005 795 ntTSL 3 BASIC18.81■□□□□ 0.6
PRAMEF25A6NGN4 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
PRAMEF25A6NGN4 AC104771.1-201ENST00000603335 964 ntBASIC18.81■□□□□ 0.6
PRAMEF25A6NGN4 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC18.81■□□□□ 0.6
PRAMEF25A6NGN4 AC100791.3-201ENST00000617619 330 ntBASIC18.81■□□□□ 0.6
PRAMEF25A6NGN4 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
PRAMEF25A6NGN4 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PRAMEF25A6NGN4 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC18.81■□□□□ 0.6
PRAMEF25A6NGN4 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC18.81■□□□□ 0.6
PRAMEF25A6NGN4 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC18.81■□□□□ 0.6
PRAMEF25A6NGN4 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PRAMEF25A6NGN4 AC010980.2-201ENST00000587099 1412 ntBASIC18.81■□□□□ 0.6
PRAMEF25A6NGN4 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PRAMEF25A6NGN4 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
PRAMEF25A6NGN4 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC18.81■□□□□ 0.6
PRAMEF25A6NGN4 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC18.81■□□□□ 0.6
PRAMEF25A6NGN4 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC18.81■□□□□ 0.6
PRAMEF25A6NGN4 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC18.8■□□□□ 0.6
PRAMEF25A6NGN4 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PRAMEF25A6NGN4 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC18.8■□□□□ 0.6
PRAMEF25A6NGN4 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC18.8■□□□□ 0.6
PRAMEF25A6NGN4 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC18.8■□□□□ 0.6
PRAMEF25A6NGN4 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PRAMEF25A6NGN4 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC18.8■□□□□ 0.6
PRAMEF25A6NGN4 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
PRAMEF25A6NGN4 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
PRAMEF25A6NGN4 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
PRAMEF25A6NGN4 GUSBP6-202ENST00000438529 1198 ntBASIC18.8■□□□□ 0.6
PRAMEF25A6NGN4 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
PRAMEF25A6NGN4 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC18.8■□□□□ 0.6
PRAMEF25A6NGN4 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC18.8■□□□□ 0.6
PRAMEF25A6NGN4 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC18.8■□□□□ 0.6
PRAMEF25A6NGN4 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
PRAMEF25A6NGN4 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PRAMEF25A6NGN4 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC18.8■□□□□ 0.6
PRAMEF25A6NGN4 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
PRAMEF25A6NGN4 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
PRAMEF25A6NGN4 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC18.8■□□□□ 0.6
PRAMEF25A6NGN4 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
PRAMEF25A6NGN4 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
PRAMEF25A6NGN4 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
PRAMEF25A6NGN4 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC18.8■□□□□ 0.6
PRAMEF25A6NGN4 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PRAMEF25A6NGN4 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC18.79■□□□□ 0.6
PRAMEF25A6NGN4 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PRAMEF25A6NGN4 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PRAMEF25A6NGN4 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
PRAMEF25A6NGN4 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC18.79■□□□□ 0.6
PRAMEF25A6NGN4 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PRAMEF25A6NGN4 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC18.79■□□□□ 0.6
PRAMEF25A6NGN4 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PRAMEF25A6NGN4 LBX2-AS1-202ENST00000603175 2083 ntBASIC18.79■□□□□ 0.6
PRAMEF25A6NGN4 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
PRAMEF25A6NGN4 MCRIP2P1-201ENST00000394346 511 ntBASIC18.79■□□□□ 0.6
PRAMEF25A6NGN4 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC18.79■□□□□ 0.6
PRAMEF25A6NGN4 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC18.79■□□□□ 0.6
PRAMEF25A6NGN4 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC18.79■□□□□ 0.6
PRAMEF25A6NGN4 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC18.79■□□□□ 0.6
PRAMEF25A6NGN4 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC18.79■□□□□ 0.6
PRAMEF25A6NGN4 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC18.79■□□□□ 0.6
PRAMEF25A6NGN4 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PRAMEF25A6NGN4 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PRAMEF25A6NGN4 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
PRAMEF25A6NGN4 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PRAMEF25A6NGN4 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC18.78■□□□□ 0.6
PRAMEF25A6NGN4 CYP21A1P-202ENST00000354927 1481 ntBASIC18.78■□□□□ 0.6
PRAMEF25A6NGN4 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 38.5 ms