Protein–RNA interactions for Protein: A0A0A6YY99

TNFSF12-TNFSF13, Protein TNFSF12-TNFSF13, humanhuman

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF12-TNFSF13A0A0A6YY99 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC18.27■□□□□ 0.52
TNFSF12-TNFSF13A0A0A6YY99 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
TNFSF12-TNFSF13A0A0A6YY99 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
TNFSF12-TNFSF13A0A0A6YY99 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
TNFSF12-TNFSF13A0A0A6YY99 FAM201B-201ENST00000458407 597 ntBASIC18.27■□□□□ 0.52
TNFSF12-TNFSF13A0A0A6YY99 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
TNFSF12-TNFSF13A0A0A6YY99 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
TNFSF12-TNFSF13A0A0A6YY99 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC18.27■□□□□ 0.52
TNFSF12-TNFSF13A0A0A6YY99 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
TNFSF12-TNFSF13A0A0A6YY99 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
TNFSF12-TNFSF13A0A0A6YY99 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC18.27■□□□□ 0.52
TNFSF12-TNFSF13A0A0A6YY99 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC18.27■□□□□ 0.52
TNFSF12-TNFSF13A0A0A6YY99 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC18.27■□□□□ 0.52
TNFSF12-TNFSF13A0A0A6YY99 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC18.27■□□□□ 0.52
TNFSF12-TNFSF13A0A0A6YY99 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.51
TNFSF12-TNFSF13A0A0A6YY99 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.51
TNFSF12-TNFSF13A0A0A6YY99 H19-201ENST00000411754 1788 ntTSL 5 BASIC18.27■□□□□ 0.51
TNFSF12-TNFSF13A0A0A6YY99 SMG8-203ENST00000578922 2178 ntBASIC18.27■□□□□ 0.51
TNFSF12-TNFSF13A0A0A6YY99 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC18.27■□□□□ 0.51
TNFSF12-TNFSF13A0A0A6YY99 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
TNFSF12-TNFSF13A0A0A6YY99 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
TNFSF12-TNFSF13A0A0A6YY99 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC18.26■□□□□ 0.51
TNFSF12-TNFSF13A0A0A6YY99 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
TNFSF12-TNFSF13A0A0A6YY99 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
TNFSF12-TNFSF13A0A0A6YY99 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
TNFSF12-TNFSF13A0A0A6YY99 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
TNFSF12-TNFSF13A0A0A6YY99 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC18.26■□□□□ 0.51
TNFSF12-TNFSF13A0A0A6YY99 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC18.26■□□□□ 0.51
TNFSF12-TNFSF13A0A0A6YY99 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC18.26■□□□□ 0.51
TNFSF12-TNFSF13A0A0A6YY99 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
TNFSF12-TNFSF13A0A0A6YY99 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
TNFSF12-TNFSF13A0A0A6YY99 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
TNFSF12-TNFSF13A0A0A6YY99 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
TNFSF12-TNFSF13A0A0A6YY99 NME6-213ENST00000451657 871 ntTSL 2 BASIC18.26■□□□□ 0.51
TNFSF12-TNFSF13A0A0A6YY99 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
TNFSF12-TNFSF13A0A0A6YY99 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
TNFSF12-TNFSF13A0A0A6YY99 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC18.26■□□□□ 0.51
TNFSF12-TNFSF13A0A0A6YY99 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
TNFSF12-TNFSF13A0A0A6YY99 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
TNFSF12-TNFSF13A0A0A6YY99 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC18.26■□□□□ 0.51
TNFSF12-TNFSF13A0A0A6YY99 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
TNFSF12-TNFSF13A0A0A6YY99 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC18.26■□□□□ 0.51
TNFSF12-TNFSF13A0A0A6YY99 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
TNFSF12-TNFSF13A0A0A6YY99 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC18.25■□□□□ 0.51
TNFSF12-TNFSF13A0A0A6YY99 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
TNFSF12-TNFSF13A0A0A6YY99 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC18.25■□□□□ 0.51
TNFSF12-TNFSF13A0A0A6YY99 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
TNFSF12-TNFSF13A0A0A6YY99 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC18.25■□□□□ 0.51
TNFSF12-TNFSF13A0A0A6YY99 PTBP1P-201ENST00000554374 1601 ntBASIC18.25■□□□□ 0.51
TNFSF12-TNFSF13A0A0A6YY99 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
TNFSF12-TNFSF13A0A0A6YY99 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
TNFSF12-TNFSF13A0A0A6YY99 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
TNFSF12-TNFSF13A0A0A6YY99 POU5F1P3-201ENST00000428824 1078 ntBASIC18.25■□□□□ 0.51
TNFSF12-TNFSF13A0A0A6YY99 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC18.25■□□□□ 0.51
TNFSF12-TNFSF13A0A0A6YY99 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
TNFSF12-TNFSF13A0A0A6YY99 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC18.25■□□□□ 0.51
TNFSF12-TNFSF13A0A0A6YY99 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
TNFSF12-TNFSF13A0A0A6YY99 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
TNFSF12-TNFSF13A0A0A6YY99 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC18.25■□□□□ 0.51
TNFSF12-TNFSF13A0A0A6YY99 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC18.25■□□□□ 0.51
TNFSF12-TNFSF13A0A0A6YY99 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC18.25■□□□□ 0.51
TNFSF12-TNFSF13A0A0A6YY99 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
TNFSF12-TNFSF13A0A0A6YY99 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
TNFSF12-TNFSF13A0A0A6YY99 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
TNFSF12-TNFSF13A0A0A6YY99 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
TNFSF12-TNFSF13A0A0A6YY99 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC18.25■□□□□ 0.51
TNFSF12-TNFSF13A0A0A6YY99 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
TNFSF12-TNFSF13A0A0A6YY99 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
TNFSF12-TNFSF13A0A0A6YY99 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
TNFSF12-TNFSF13A0A0A6YY99 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
TNFSF12-TNFSF13A0A0A6YY99 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
TNFSF12-TNFSF13A0A0A6YY99 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC18.24■□□□□ 0.51
TNFSF12-TNFSF13A0A0A6YY99 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
TNFSF12-TNFSF13A0A0A6YY99 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
TNFSF12-TNFSF13A0A0A6YY99 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
TNFSF12-TNFSF13A0A0A6YY99 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
TNFSF12-TNFSF13A0A0A6YY99 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
TNFSF12-TNFSF13A0A0A6YY99 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC18.24■□□□□ 0.51
TNFSF12-TNFSF13A0A0A6YY99 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC18.24■□□□□ 0.51
TNFSF12-TNFSF13A0A0A6YY99 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC18.24■□□□□ 0.51
TNFSF12-TNFSF13A0A0A6YY99 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC18.24■□□□□ 0.51
TNFSF12-TNFSF13A0A0A6YY99 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC18.24■□□□□ 0.51
TNFSF12-TNFSF13A0A0A6YY99 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC18.24■□□□□ 0.51
TNFSF12-TNFSF13A0A0A6YY99 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC18.24■□□□□ 0.51
TNFSF12-TNFSF13A0A0A6YY99 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC18.24■□□□□ 0.51
TNFSF12-TNFSF13A0A0A6YY99 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
TNFSF12-TNFSF13A0A0A6YY99 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
TNFSF12-TNFSF13A0A0A6YY99 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC18.24■□□□□ 0.51
TNFSF12-TNFSF13A0A0A6YY99 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
TNFSF12-TNFSF13A0A0A6YY99 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
TNFSF12-TNFSF13A0A0A6YY99 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC18.24■□□□□ 0.51
TNFSF12-TNFSF13A0A0A6YY99 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
TNFSF12-TNFSF13A0A0A6YY99 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC18.23■□□□□ 0.51
TNFSF12-TNFSF13A0A0A6YY99 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
TNFSF12-TNFSF13A0A0A6YY99 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
TNFSF12-TNFSF13A0A0A6YY99 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TNFSF12-TNFSF13A0A0A6YY99 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TNFSF12-TNFSF13A0A0A6YY99 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC18.23■□□□□ 0.51
TNFSF12-TNFSF13A0A0A6YY99 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
TNFSF12-TNFSF13A0A0A6YY99 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC18.23■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 40.7 ms