Protein–RNA interactions for Protein: A0A087X179

TBC1D3E, TBC1 domain family member 3E, humanhuman

Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D3EA0A087X179 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
TBC1D3EA0A087X179 AL121603.2-201ENST00000557373 2117 ntBASIC20.05■□□□□ 0.8
TBC1D3EA0A087X179 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC20.05■□□□□ 0.8
TBC1D3EA0A087X179 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC20.04■□□□□ 0.8
TBC1D3EA0A087X179 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
TBC1D3EA0A087X179 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
TBC1D3EA0A087X179 AL135905.2-201ENST00000584934 1404 ntBASIC20.04■□□□□ 0.8
TBC1D3EA0A087X179 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
TBC1D3EA0A087X179 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
TBC1D3EA0A087X179 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
TBC1D3EA0A087X179 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
TBC1D3EA0A087X179 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
TBC1D3EA0A087X179 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC20.04■□□□□ 0.8
TBC1D3EA0A087X179 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
TBC1D3EA0A087X179 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC20.04■□□□□ 0.8
TBC1D3EA0A087X179 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC20.04■□□□□ 0.8
TBC1D3EA0A087X179 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC20.04■□□□□ 0.8
TBC1D3EA0A087X179 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC20.04■□□□□ 0.8
TBC1D3EA0A087X179 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
TBC1D3EA0A087X179 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC20.04■□□□□ 0.8
TBC1D3EA0A087X179 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
TBC1D3EA0A087X179 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
TBC1D3EA0A087X179 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC20.04■□□□□ 0.8
TBC1D3EA0A087X179 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
TBC1D3EA0A087X179 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
TBC1D3EA0A087X179 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
TBC1D3EA0A087X179 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC20.03■□□□□ 0.8
TBC1D3EA0A087X179 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC20.03■□□□□ 0.8
TBC1D3EA0A087X179 FP700111.2-201ENST00000619190 1892 ntBASIC20.03■□□□□ 0.8
TBC1D3EA0A087X179 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
TBC1D3EA0A087X179 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC20.03■□□□□ 0.8
TBC1D3EA0A087X179 WWC2-AS2-201ENST00000578387 2183 ntBASIC20.03■□□□□ 0.8
TBC1D3EA0A087X179 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
TBC1D3EA0A087X179 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC20.03■□□□□ 0.8
TBC1D3EA0A087X179 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
TBC1D3EA0A087X179 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
TBC1D3EA0A087X179 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
TBC1D3EA0A087X179 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC20.03■□□□□ 0.8
TBC1D3EA0A087X179 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC20.03■□□□□ 0.8
TBC1D3EA0A087X179 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC20.03■□□□□ 0.8
TBC1D3EA0A087X179 REXO2-216ENST00000544196 452 ntTSL 3 BASIC20.03■□□□□ 0.8
TBC1D3EA0A087X179 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
TBC1D3EA0A087X179 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC20.03■□□□□ 0.8
TBC1D3EA0A087X179 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
TBC1D3EA0A087X179 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
TBC1D3EA0A087X179 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
TBC1D3EA0A087X179 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
TBC1D3EA0A087X179 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
TBC1D3EA0A087X179 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC20.02■□□□□ 0.8
TBC1D3EA0A087X179 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
TBC1D3EA0A087X179 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC20.02■□□□□ 0.8
TBC1D3EA0A087X179 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
TBC1D3EA0A087X179 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC20.02■□□□□ 0.8
TBC1D3EA0A087X179 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC20.02■□□□□ 0.8
TBC1D3EA0A087X179 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
TBC1D3EA0A087X179 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
TBC1D3EA0A087X179 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
TBC1D3EA0A087X179 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
TBC1D3EA0A087X179 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
TBC1D3EA0A087X179 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
TBC1D3EA0A087X179 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
TBC1D3EA0A087X179 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
TBC1D3EA0A087X179 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
TBC1D3EA0A087X179 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC20.02■□□□□ 0.8
TBC1D3EA0A087X179 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC20.02■□□□□ 0.8
TBC1D3EA0A087X179 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
TBC1D3EA0A087X179 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
TBC1D3EA0A087X179 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC20.02■□□□□ 0.8
TBC1D3EA0A087X179 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC20.02■□□□□ 0.8
TBC1D3EA0A087X179 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
TBC1D3EA0A087X179 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
TBC1D3EA0A087X179 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
TBC1D3EA0A087X179 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
TBC1D3EA0A087X179 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
TBC1D3EA0A087X179 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
TBC1D3EA0A087X179 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
TBC1D3EA0A087X179 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.79
TBC1D3EA0A087X179 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
TBC1D3EA0A087X179 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.79
TBC1D3EA0A087X179 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
TBC1D3EA0A087X179 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
TBC1D3EA0A087X179 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC20.01■□□□□ 0.79
TBC1D3EA0A087X179 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
TBC1D3EA0A087X179 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
TBC1D3EA0A087X179 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
TBC1D3EA0A087X179 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
TBC1D3EA0A087X179 TSPY7P-201ENST00000431358 1114 ntBASIC20.01■□□□□ 0.79
TBC1D3EA0A087X179 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC20.01■□□□□ 0.79
TBC1D3EA0A087X179 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC20.01■□□□□ 0.79
TBC1D3EA0A087X179 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
TBC1D3EA0A087X179 AL049637.2-201ENST00000641778 930 ntBASIC20.01■□□□□ 0.79
TBC1D3EA0A087X179 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC20.01■□□□□ 0.79
TBC1D3EA0A087X179 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
TBC1D3EA0A087X179 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
TBC1D3EA0A087X179 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
TBC1D3EA0A087X179 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
TBC1D3EA0A087X179 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC20■□□□□ 0.79
TBC1D3EA0A087X179 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC20■□□□□ 0.79
TBC1D3EA0A087X179 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC20■□□□□ 0.79
TBC1D3EA0A087X179 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC20■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 21 ms