Protein–RNA interactions for Protein: A0A087WSZ9

TRAV30, T-cell receptor alpha variable 30 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV30A0A087WSZ9 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
TRAV30A0A087WSZ9 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC15.75■□□□□ 0.11
TRAV30A0A087WSZ9 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC15.75■□□□□ 0.11
TRAV30A0A087WSZ9 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
TRAV30A0A087WSZ9 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
TRAV30A0A087WSZ9 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
TRAV30A0A087WSZ9 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
TRAV30A0A087WSZ9 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
TRAV30A0A087WSZ9 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
TRAV30A0A087WSZ9 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
TRAV30A0A087WSZ9 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
TRAV30A0A087WSZ9 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
TRAV30A0A087WSZ9 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
TRAV30A0A087WSZ9 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
TRAV30A0A087WSZ9 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
TRAV30A0A087WSZ9 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC15.74■□□□□ 0.11
TRAV30A0A087WSZ9 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
TRAV30A0A087WSZ9 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC15.74■□□□□ 0.11
TRAV30A0A087WSZ9 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC15.74■□□□□ 0.11
TRAV30A0A087WSZ9 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
TRAV30A0A087WSZ9 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
TRAV30A0A087WSZ9 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
TRAV30A0A087WSZ9 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC15.74■□□□□ 0.11
TRAV30A0A087WSZ9 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC15.74■□□□□ 0.11
TRAV30A0A087WSZ9 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC15.74■□□□□ 0.11
TRAV30A0A087WSZ9 NTF6G-201ENST00000591094 616 ntBASIC15.74■□□□□ 0.11
TRAV30A0A087WSZ9 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
TRAV30A0A087WSZ9 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
TRAV30A0A087WSZ9 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
TRAV30A0A087WSZ9 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC15.74■□□□□ 0.11
TRAV30A0A087WSZ9 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
TRAV30A0A087WSZ9 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC15.74■□□□□ 0.11
TRAV30A0A087WSZ9 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
TRAV30A0A087WSZ9 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
TRAV30A0A087WSZ9 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
TRAV30A0A087WSZ9 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
TRAV30A0A087WSZ9 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC15.73■□□□□ 0.11
TRAV30A0A087WSZ9 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
TRAV30A0A087WSZ9 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
TRAV30A0A087WSZ9 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
TRAV30A0A087WSZ9 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
TRAV30A0A087WSZ9 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
TRAV30A0A087WSZ9 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC15.73■□□□□ 0.11
TRAV30A0A087WSZ9 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC15.73■□□□□ 0.11
TRAV30A0A087WSZ9 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
TRAV30A0A087WSZ9 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
TRAV30A0A087WSZ9 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC15.73■□□□□ 0.11
TRAV30A0A087WSZ9 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC15.73■□□□□ 0.11
TRAV30A0A087WSZ9 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
TRAV30A0A087WSZ9 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC15.73■□□□□ 0.11
TRAV30A0A087WSZ9 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC15.73■□□□□ 0.11
TRAV30A0A087WSZ9 ME2-218ENST00000640965 2476 ntTSL 5 BASIC15.73■□□□□ 0.11
TRAV30A0A087WSZ9 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
TRAV30A0A087WSZ9 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC15.73■□□□□ 0.11
TRAV30A0A087WSZ9 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
TRAV30A0A087WSZ9 DPP3P2-201ENST00000416030 1696 ntBASIC15.73■□□□□ 0.11
TRAV30A0A087WSZ9 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
TRAV30A0A087WSZ9 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC15.73■□□□□ 0.11
TRAV30A0A087WSZ9 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC15.73■□□□□ 0.11
TRAV30A0A087WSZ9 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
TRAV30A0A087WSZ9 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
TRAV30A0A087WSZ9 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
TRAV30A0A087WSZ9 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
TRAV30A0A087WSZ9 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
TRAV30A0A087WSZ9 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
TRAV30A0A087WSZ9 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TRAV30A0A087WSZ9 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
TRAV30A0A087WSZ9 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TRAV30A0A087WSZ9 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TRAV30A0A087WSZ9 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TRAV30A0A087WSZ9 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TRAV30A0A087WSZ9 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TRAV30A0A087WSZ9 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TRAV30A0A087WSZ9 AC087633.2-202ENST00000565166 1439 ntBASIC15.72■□□□□ 0.11
TRAV30A0A087WSZ9 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
TRAV30A0A087WSZ9 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC15.72■□□□□ 0.11
TRAV30A0A087WSZ9 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TRAV30A0A087WSZ9 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC15.72■□□□□ 0.11
TRAV30A0A087WSZ9 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
TRAV30A0A087WSZ9 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC15.72■□□□□ 0.11
TRAV30A0A087WSZ9 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC15.72■□□□□ 0.11
TRAV30A0A087WSZ9 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
TRAV30A0A087WSZ9 AL356652.1-201ENST00000615962 565 ntBASIC15.72■□□□□ 0.11
TRAV30A0A087WSZ9 AC010536.3-201ENST00000620306 533 ntBASIC15.72■□□□□ 0.11
TRAV30A0A087WSZ9 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC15.72■□□□□ 0.11
TRAV30A0A087WSZ9 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
TRAV30A0A087WSZ9 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC15.72■□□□□ 0.11
TRAV30A0A087WSZ9 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC15.72■□□□□ 0.11
TRAV30A0A087WSZ9 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TRAV30A0A087WSZ9 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
TRAV30A0A087WSZ9 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TRAV30A0A087WSZ9 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TRAV30A0A087WSZ9 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TRAV30A0A087WSZ9 TCF3P1-201ENST00000423021 1937 ntBASIC15.72■□□□□ 0.11
TRAV30A0A087WSZ9 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC15.72■□□□□ 0.11
TRAV30A0A087WSZ9 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
TRAV30A0A087WSZ9 SMG8-203ENST00000578922 2178 ntBASIC15.72■□□□□ 0.11
TRAV30A0A087WSZ9 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TRAV30A0A087WSZ9 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
TRAV30A0A087WSZ9 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 19.9 ms