Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 HNRNPA1P30-201ENST00000424329 751 ntTSL 3 BASIC7.04□□□□□ -1.28
SNX18Q96RF0 MIR4435-2HG-205ENST00000431385 843 ntTSL 3 BASIC7.04□□□□□ -1.28
SNX18Q96RF0 AL353653.1-202ENST00000435177 539 ntTSL 3 BASIC7.04□□□□□ -1.28
SNX18Q96RF0 AC098483.1-202ENST00000436515 967 ntTSL 2 BASIC7.04□□□□□ -1.28
SNX18Q96RF0 LINC01865-202ENST00000436808 853 ntTSL 5 BASIC7.04□□□□□ -1.28
SNX18Q96RF0 TTC21B-AS1-202ENST00000443032 544 ntTSL 4 BASIC7.04□□□□□ -1.28
SNX18Q96RF0 AC138089.1-201ENST00000450847 967 ntTSL 2 BASIC7.04□□□□□ -1.28
SNX18Q96RF0 SUMO2P10-201ENST00000452006 288 ntBASIC7.04□□□□□ -1.28
SNX18Q96RF0 MIR4435-2HG-214ENST00000453478 560 ntTSL 4 BASIC7.04□□□□□ -1.28
SNX18Q96RF0 AF015262.1-201ENST00000455028 698 ntTSL 3 BASIC7.04□□□□□ -1.28
SNX18Q96RF0 MTND3P6-201ENST00000485242 339 ntBASIC7.04□□□□□ -1.28
SNX18Q96RF0 CC2D2A-205ENST00000503658 605 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
SNX18Q96RF0 LINC01151-201ENST00000521608 571 ntTSL 4 BASIC7.04□□□□□ -1.28
SNX18Q96RF0 PTK2-241ENST00000522950 548 ntTSL 4 BASIC7.04□□□□□ -1.28
SNX18Q96RF0 CCDC32-203ENST00000558113 576 ntTSL 3 BASIC7.04□□□□□ -1.28
SNX18Q96RF0 CCDC32-210ENST00000559911 677 ntTSL 5 BASIC7.04□□□□□ -1.28
SNX18Q96RF0 SOD1P2-201ENST00000563903 451 ntBASIC7.04□□□□□ -1.28
SNX18Q96RF0 AC010528.1-201ENST00000568714 739 ntTSL 4 BASIC7.04□□□□□ -1.28
SNX18Q96RF0 AC010980.1-204ENST00000589724 585 ntTSL 5 BASIC7.04□□□□□ -1.28
SNX18Q96RF0 AC087623.4-201ENST00000606593 695 ntBASIC7.04□□□□□ -1.28
SNX18Q96RF0 CT45A7-201ENST00000610598 996 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
SNX18Q96RF0 MIR6807-201ENST00000621968 92 ntBASIC7.04□□□□□ -1.28
SNX18Q96RF0 AL359094.1-202ENST00000629917 1113 ntTSL 5 BASIC7.04□□□□□ -1.28
SNX18Q96RF0 LINC01358-208ENST00000634569 1030 ntTSL 5 BASIC7.04□□□□□ -1.28
SNX18Q96RF0 TMEM14EP-202ENST00000639378 1296 ntBASIC7.04□□□□□ -1.28
SNX18Q96RF0 NBPF14-209ENST00000620240 2656 ntTSL 5 BASIC7.04□□□□□ -1.28
SNX18Q96RF0 FOPNL-206ENST00000573968 2039 ntTSL 2 BASIC7.04□□□□□ -1.28
SNX18Q96RF0 GREM1-203ENST00000622074 14606 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
SNX18Q96RF0 SPATA31C2-201ENST00000324915 3777 ntBASIC7.04□□□□□ -1.28
SNX18Q96RF0 EIF4G2-208ENST00000526148 4001 ntAPPRIS ALT2 TSL 1 (best) BASIC7.04□□□□□ -1.28
SNX18Q96RF0 MS4A3-201ENST00000278865 1613 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
SNX18Q96RF0 FAM13A-205ENST00000503556 3386 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
SNX18Q96RF0 CCNT2-202ENST00000295238 4491 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
SNX18Q96RF0 RNASEL-201ENST00000367559 4238 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
SNX18Q96RF0 OR52B5P-204ENST00000641744 3467 ntBASIC7.04□□□□□ -1.28
SNX18Q96RF0 NAA15-208ENST00000515576 2456 ntTSL 2 BASIC7.04□□□□□ -1.28
SNX18Q96RF0 CCDC66-203ENST00000394672 3096 ntAPPRIS ALT2 TSL 1 (best) BASIC7.04□□□□□ -1.28
SNX18Q96RF0 FHL1-204ENST00000370683 2565 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
SNX18Q96RF0 ZNF226-213ENST00000588883 5972 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
SNX18Q96RF0 TRIM55-202ENST00000315962 2914 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
SNX18Q96RF0 MYB-235ENST00000533624 1818 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
SNX18Q96RF0 MYB-238ENST00000534044 1812 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
SNX18Q96RF0 SCAPER-202ENST00000324767 4707 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
SNX18Q96RF0 UBE2U-206ENST00000611228 1550 ntAPPRIS ALT2 TSL 5 BASIC7.03□□□□□ -1.28
SNX18Q96RF0 CLCC1-203ENST00000356970 4803 ntAPPRIS ALT2 TSL 5 BASIC7.03□□□□□ -1.28
SNX18Q96RF0 RIPOR2-205ENST00000510784 3381 ntTSL 2 BASIC7.03□□□□□ -1.28
SNX18Q96RF0 H3F3A-201ENST00000366813 1308 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
SNX18Q96RF0 SLC9B1P3-201ENST00000452667 1334 ntBASIC7.03□□□□□ -1.28
SNX18Q96RF0 DDX11L16-201ENST00000507418 1306 ntBASIC7.03□□□□□ -1.28
SNX18Q96RF0 CHST12-201ENST00000258711 15979 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
SNX18Q96RF0 ZMYND8-216ENST00000471951 4053 ntAPPRIS ALT2 TSL 1 (best) BASIC7.03□□□□□ -1.28
SNX18Q96RF0 AL671511.1-201ENST00000425033 3458 ntTSL 2 BASIC7.03□□□□□ -1.28
SNX18Q96RF0 FMO5-203ENST00000441068 1696 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
SNX18Q96RF0 ZBTB25-204ENST00000608382 10372 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
SNX18Q96RF0 FAM227A-205ENST00000535113 10322 ntAPPRIS ALT2 TSL 5 BASIC7.03□□□□□ -1.28
SNX18Q96RF0 SAP18-207ENST00000607003 2234 ntAPPRIS ALT1 TSL 1 (best) BASIC7.03□□□□□ -1.28
SNX18Q96RF0 LINC00598-215ENST00000638084 1974 ntTSL 5 BASIC7.03□□□□□ -1.28
SNX18Q96RF0 GSTM1-203ENST00000369819 790 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
SNX18Q96RF0 EEF1AKMT1-202ENST00000382758 1042 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
SNX18Q96RF0 CD209-205ENST00000394161 507 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
SNX18Q96RF0 H2AFZP3-201ENST00000394213 387 ntBASIC7.03□□□□□ -1.28
SNX18Q96RF0 VDAC1P8-201ENST00000406025 853 ntBASIC7.03□□□□□ -1.28
SNX18Q96RF0 AL645634.1-201ENST00000418426 462 ntTSL 3 BASIC7.03□□□□□ -1.28
SNX18Q96RF0 AC022535.1-201ENST00000420082 691 ntTSL 3 BASIC7.03□□□□□ -1.28
SNX18Q96RF0 CCNT2-AS1-203ENST00000428857 677 ntTSL 4 BASIC7.03□□□□□ -1.28
SNX18Q96RF0 AC010086.1-201ENST00000437359 1052 ntBASIC7.03□□□□□ -1.28
SNX18Q96RF0 HCG20-208ENST00000439406 1202 ntTSL 2 BASIC7.03□□□□□ -1.28
SNX18Q96RF0 AC007386.1-201ENST00000455212 582 ntBASIC7.03□□□□□ -1.28
SNX18Q96RF0 NDUFS5P2-201ENST00000484004 306 ntBASIC7.03□□□□□ -1.28
SNX18Q96RF0 L1TD1-201ENST00000498273 3849 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
SNX18Q96RF0 AC233724.1-201ENST00000503894 233 ntBASIC7.03□□□□□ -1.28
SNX18Q96RF0 AC113382.2-201ENST00000506911 646 ntTSL 3 BASIC7.03□□□□□ -1.28
SNX18Q96RF0 AC004052.1-201ENST00000514327 567 ntTSL 4 BASIC7.03□□□□□ -1.28
SNX18Q96RF0 NSMCE2-208ENST00000520866 1183 ntTSL 2 BASIC7.03□□□□□ -1.28
SNX18Q96RF0 AC132192.1-201ENST00000531111 597 ntTSL 3 BASIC7.03□□□□□ -1.28
SNX18Q96RF0 CCDC58P5-201ENST00000536923 432 ntBASIC7.03□□□□□ -1.28
SNX18Q96RF0 AC078878.1-201ENST00000539832 958 ntBASIC7.03□□□□□ -1.28
SNX18Q96RF0 LACRT-203ENST00000547511 504 ntAPPRIS ALT2 TSL 3 BASIC7.03□□□□□ -1.28
SNX18Q96RF0 PRR13-205ENST00000549068 755 ntAPPRIS ALT2 TSL 5 BASIC7.03□□□□□ -1.28
SNX18Q96RF0 GSTZ1-216ENST00000556627 919 ntTSL 3 BASIC7.03□□□□□ -1.28
SNX18Q96RF0 LINC02544-201ENST00000564830 544 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
SNX18Q96RF0 TM6SF1-207ENST00000565774 1020 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
SNX18Q96RF0 AC140658.6-201ENST00000603958 201 ntBASIC7.03□□□□□ -1.28
SNX18Q96RF0 AC105148.1-201ENST00000604961 409 ntBASIC7.03□□□□□ -1.28
SNX18Q96RF0 RN7SL760P-201ENST00000607344 270 ntBASIC7.03□□□□□ -1.28
SNX18Q96RF0 AC092574.1-201ENST00000609771 420 ntBASIC7.03□□□□□ -1.28
SNX18Q96RF0 AC004839.1-201ENST00000610269 501 ntBASIC7.03□□□□□ -1.28
SNX18Q96RF0 AC107905.1-201ENST00000616204 426 ntBASIC7.03□□□□□ -1.28
SNX18Q96RF0 RN7SL113P-201ENST00000619959 299 ntBASIC7.03□□□□□ -1.28
SNX18Q96RF0 AL136359.1-201ENST00000625090 565 ntTSL 2 BASIC7.03□□□□□ -1.28
SNX18Q96RF0 TP53BP1-202ENST00000382039 6015 ntTSL 5 BASIC7.03□□□□□ -1.28
SNX18Q96RF0 TMEM246-203ENST00000374851 5070 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
SNX18Q96RF0 AC005839.1-201ENST00000624148 3213 ntBASIC7.03□□□□□ -1.28
SNX18Q96RF0 MAPK10-323ENST00000641493 3207 ntBASIC7.03□□□□□ -1.28
SNX18Q96RF0 PPHLN1-202ENST00000317560 1359 ntTSL 2 BASIC7.03□□□□□ -1.28
SNX18Q96RF0 AP000766.1-201ENST00000561746 4140 ntBASIC7.03□□□□□ -1.28
SNX18Q96RF0 MED28-201ENST00000237380 10868 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
SNX18Q96RF0 ZNF585B-204ENST00000531805 2971 ntTSL 2 BASIC7.03□□□□□ -1.28
SNX18Q96RF0 MORF4L2-210ENST00000451301 1830 ntAPPRIS P1 TSL 2 BASIC7.03□□□□□ -1.28
SNX18Q96RF0 AC068512.1-201ENST00000584542 1811 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
Retrieved 100 of 98,524 protein–RNA pairs in 65.9 ms