Protein–RNA interactions for Protein: O60939

SCN2B, Sodium channel subunit beta-2, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2BO60939 AC114550.1-201ENST00000518846 573 ntTSL 4 BASIC7.12□□□□□ -1.27
SCN2BO60939 LINC01591-202ENST00000522279 1240 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
SCN2BO60939 ANAPC15-211ENST00000542531 812 ntAPPRIS P3 TSL 5 BASIC7.12□□□□□ -1.27
SCN2BO60939 AC137767.1-202ENST00000543072 752 ntTSL 2 BASIC7.12□□□□□ -1.27
SCN2BO60939 OVCH1-AS1-201ENST00000549411 743 ntTSL 3 BASIC7.12□□□□□ -1.27
SCN2BO60939 ETFRF1-207ENST00000556351 838 ntAPPRIS ALT1 TSL 2 BASIC7.12□□□□□ -1.27
SCN2BO60939 ETFRF1-210ENST00000556927 833 ntAPPRIS ALT1 TSL 3 BASIC7.12□□□□□ -1.27
SCN2BO60939 AC116903.1-201ENST00000557683 539 ntTSL 4 BASIC7.12□□□□□ -1.27
SCN2BO60939 AC103968.1-201ENST00000557841 573 ntBASIC7.12□□□□□ -1.27
SCN2BO60939 AC114546.2-201ENST00000560683 477 ntTSL 3 BASIC7.12□□□□□ -1.27
SCN2BO60939 RBM22P13-201ENST00000569805 1244 ntBASIC7.12□□□□□ -1.27
SCN2BO60939 DLGAP1-AS3-201ENST00000577649 1258 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
SCN2BO60939 AC015674.1-201ENST00000578482 267 ntBASIC7.12□□□□□ -1.27
SCN2BO60939 SLFN5-203ENST00000592325 1225 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
SCN2BO60939 ZNF525-206ENST00000593918 590 ntTSL 5 BASIC7.12□□□□□ -1.27
SCN2BO60939 AC093063.1-201ENST00000599317 363 ntBASIC7.12□□□□□ -1.27
SCN2BO60939 AC012370.2-202ENST00000600508 1099 ntTSL 5 BASIC7.12□□□□□ -1.27
SCN2BO60939 AL391903.2-201ENST00000614532 247 ntBASIC7.12□□□□□ -1.27
SCN2BO60939 Metazoa_SRP.123-201ENST00000616695 286 ntBASIC7.12□□□□□ -1.27
SCN2BO60939 KIAA1324L-203ENST00000416314 3179 ntAPPRIS P3 TSL 2 BASIC7.12□□□□□ -1.27
SCN2BO60939 VPS53-204ENST00000437048 13106 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
SCN2BO60939 AL022068.1-201ENST00000636202 1875 ntTSL 5 BASIC7.12□□□□□ -1.27
SCN2BO60939 KIAA0391-201ENST00000250377 6118 ntTSL 2 BASIC7.12□□□□□ -1.27
SCN2BO60939 AC016722.2-201ENST00000429761 1835 ntTSL 2 BASIC7.12□□□□□ -1.27
SCN2BO60939 CPEB2-AS1-202ENST00000501916 1806 ntTSL 2 BASIC7.12□□□□□ -1.27
SCN2BO60939 ADAMTS9-AS2-202ENST00000474768 2388 ntTSL 2 BASIC7.12□□□□□ -1.27
SCN2BO60939 MEF2C-244ENST00000636998 5936 ntTSL 5 BASIC7.12□□□□□ -1.27
SCN2BO60939 SLC9A4-201ENST00000295269 4138 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
SCN2BO60939 NT5C3A-201ENST00000242210 1670 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
SCN2BO60939 CHCHD7-207ENST00000518801 1670 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
SCN2BO60939 LNPEP-202ENST00000395770 3888 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
SCN2BO60939 LRAT-206ENST00000507827 2654 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
SCN2BO60939 AL591379.1-201ENST00000315293 3739 ntTSL 2 BASIC7.12□□□□□ -1.27
SCN2BO60939 PSD3-220ENST00000615573 5843 ntTSL 5 BASIC7.12□□□□□ -1.27
SCN2BO60939 FANCL-203ENST00000403295 1576 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
SCN2BO60939 FAM71F1-207ENST00000485070 1574 ntTSL 2 BASIC7.12□□□□□ -1.27
SCN2BO60939 FAM71F1-209ENST00000621392 1591 ntTSL 5 BASIC7.12□□□□□ -1.27
SCN2BO60939 UTY-216ENST00000624098 3636 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
SCN2BO60939 METTL8-217ENST00000612742 8132 ntAPPRIS P1 TSL 2 BASIC7.11□□□□□ -1.27
SCN2BO60939 WDR89-202ENST00000394942 2993 ntAPPRIS P1 TSL 5 BASIC7.11□□□□□ -1.27
SCN2BO60939 NSRP1-217ENST00000612959 2420 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
SCN2BO60939 AL137918.1-201ENST00000624542 1922 ntBASIC7.11□□□□□ -1.27
SCN2BO60939 TP63-207ENST00000418709 2810 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
SCN2BO60939 AC096582.3-201ENST00000636578 3716 ntAPPRIS P1 TSL 5 BASIC7.11□□□□□ -1.27
SCN2BO60939 ZNF540-206ENST00000589117 2349 ntAPPRIS ALT2 TSL 1 (best) BASIC7.11□□□□□ -1.27
SCN2BO60939 RND3-202ENST00000375734 2777 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
SCN2BO60939 C11orf63-203ENST00000531316 2782 ntAPPRIS P1 TSL 2 BASIC7.11□□□□□ -1.27
SCN2BO60939 EEF1A1P5-201ENST00000436459 1389 ntBASIC7.11□□□□□ -1.27
SCN2BO60939 DYNC1I2P1-201ENST00000435916 1838 ntBASIC7.11□□□□□ -1.27
SCN2BO60939 F13A1-201ENST00000264870 3999 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
SCN2BO60939 TROVE2-205ENST00000367446 3081 ntAPPRIS P3 TSL 1 (best) BASIC7.11□□□□□ -1.27
SCN2BO60939 TRIM49-201ENST00000329758 2163 ntAPPRIS P2 TSL 1 (best) BASIC7.11□□□□□ -1.27
SCN2BO60939 TRIM49C-201ENST00000448984 2163 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
SCN2BO60939 TRIM49B-202ENST00000622138 2162 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
SCN2BO60939 IARS-205ENST00000443024 4341 ntTSL 5 BASIC7.11□□□□□ -1.27
SCN2BO60939 BVES-AS1-202ENST00000369122 1716 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
SCN2BO60939 HIKESHI-201ENST00000278483 1113 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
SCN2BO60939 PRKAA1-201ENST00000296800 1134 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
SCN2BO60939 C2orf80-201ENST00000341287 1238 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
SCN2BO60939 RN7SKP76-201ENST00000364419 323 ntBASIC7.11□□□□□ -1.27
SCN2BO60939 OR10U1P-201ENST00000414690 905 ntBASIC7.11□□□□□ -1.27
SCN2BO60939 AC008937.2-201ENST00000415589 619 ntTSL 3 BASIC7.11□□□□□ -1.27
SCN2BO60939 LINC01424-201ENST00000417820 1031 ntTSL 2 BASIC7.11□□□□□ -1.27
SCN2BO60939 AC127537.1-201ENST00000418183 748 ntBASIC7.11□□□□□ -1.27
SCN2BO60939 AL365295.1-204ENST00000425648 553 ntTSL 4 BASIC7.11□□□□□ -1.27
SCN2BO60939 HMGN2P24-201ENST00000433516 273 ntBASIC7.11□□□□□ -1.27
SCN2BO60939 AC098483.1-201ENST00000438623 955 ntTSL 5 BASIC7.11□□□□□ -1.27
SCN2BO60939 AL121885.2-201ENST00000440255 819 ntTSL 3 BASIC7.11□□□□□ -1.27
SCN2BO60939 SYNJ2-IT1-201ENST00000442328 599 ntTSL 3 BASIC7.11□□□□□ -1.27
SCN2BO60939 FO393419.1-201ENST00000443746 355 ntBASIC7.11□□□□□ -1.27
SCN2BO60939 AL135929.1-201ENST00000449287 552 ntBASIC7.11□□□□□ -1.27
SCN2BO60939 AL591438.2-201ENST00000452635 691 ntBASIC7.11□□□□□ -1.27
SCN2BO60939 AC234771.3-201ENST00000454984 622 ntBASIC7.11□□□□□ -1.27
SCN2BO60939 AC009955.1-201ENST00000455896 271 ntTSL 5 BASIC7.11□□□□□ -1.27
SCN2BO60939 CHIAP1-201ENST00000456220 995 ntBASIC7.11□□□□□ -1.27
SCN2BO60939 LINC01053-201ENST00000457628 771 ntTSL 2 BASIC7.11□□□□□ -1.27
SCN2BO60939 AC093821.1-201ENST00000503950 539 ntTSL 4 BASIC7.11□□□□□ -1.27
SCN2BO60939 AP001124.1-201ENST00000529628 385 ntBASIC7.11□□□□□ -1.27
SCN2BO60939 AP003721.2-201ENST00000536495 452 ntTSL 3 BASIC7.11□□□□□ -1.27
SCN2BO60939 AC115676.1-201ENST00000538416 329 ntTSL 3 BASIC7.11□□□□□ -1.27
SCN2BO60939 PRR13-204ENST00000547368 688 ntAPPRIS ALT2 TSL 3 BASIC7.11□□□□□ -1.27
SCN2BO60939 AL132719.1-201ENST00000554515 423 ntTSL 3 BASIC7.11□□□□□ -1.27
SCN2BO60939 TIMM9-205ENST00000555404 430 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
SCN2BO60939 LINC01588-213ENST00000557142 492 ntTSL 3 BASIC7.11□□□□□ -1.27
SCN2BO60939 AC020891.2-201ENST00000559672 776 ntTSL 2 BASIC7.11□□□□□ -1.27
SCN2BO60939 AC008626.1-201ENST00000604384 255 ntBASIC7.11□□□□□ -1.27
SCN2BO60939 AL356052.1-201ENST00000605764 376 ntBASIC7.11□□□□□ -1.27
SCN2BO60939 AC006547.1-211ENST00000609191 828 ntTSL 5 BASIC7.11□□□□□ -1.27
SCN2BO60939 MIR6751-201ENST00000610479 63 ntBASIC7.11□□□□□ -1.27
SCN2BO60939 AL121583.1-201ENST00000612444 682 ntBASIC7.11□□□□□ -1.27
SCN2BO60939 Metazoa_SRP.39-201ENST00000614194 271 ntBASIC7.11□□□□□ -1.27
SCN2BO60939 MIAT_exon1.1-201ENST00000617016 135 ntBASIC7.11□□□□□ -1.27
SCN2BO60939 MIR6761-201ENST00000617899 72 ntBASIC7.11□□□□□ -1.27
SCN2BO60939 AP005242.3-201ENST00000623604 607 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
SCN2BO60939 AC090373.1-201ENST00000623955 603 ntBASIC7.11□□□□□ -1.27
SCN2BO60939 ABL2-201ENST00000344730 6910 ntAPPRIS ALT2 TSL 1 (best) BASIC7.11□□□□□ -1.27
SCN2BO60939 HDAC9-214ENST00000441542 3210 ntAPPRIS P4 TSL 1 (best) BASIC7.11□□□□□ -1.27
SCN2BO60939 OR51E2-201ENST00000396950 2781 ntAPPRIS P1 BASIC7.11□□□□□ -1.27
SCN2BO60939 DUXAP8-203ENST00000437781 2398 ntTSL 2 BASIC7.11□□□□□ -1.27
SCN2BO60939 HP1BP3-201ENST00000312239 3938 ntAPPRIS P1 TSL 2 BASIC7.11□□□□□ -1.27
Retrieved 100 of 98,524 protein–RNA pairs in 87 ms