Protein–RNA interactions for Protein: P06340

HLA-DOA, HLA class II histocompatibility antigen, DO alpha chain, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOAP06340 HSPD1P6-201ENST00000388967 1683 ntBASIC8.88□□□□□ -0.99
HLA-DOAP06340 AC000099.1-202ENST00000413812 1912 ntTSL 1 (best) BASIC8.88□□□□□ -0.99
HLA-DOAP06340 PITRM1-AS1-201ENST00000430356 3998 ntTSL 1 (best) BASIC8.88□□□□□ -0.99
HLA-DOAP06340 NPIPB5-207ENST00000451409 3660 ntAPPRIS ALT2 TSL 5 BASIC8.87□□□□□ -0.99
HLA-DOAP06340 RNF139-AS1-201ENST00000499418 5654 ntTSL 1 (best) BASIC8.87□□□□□ -0.99
HLA-DOAP06340 CBWD6-203ENST00000456520 1608 ntTSL 1 (best) BASIC8.87□□□□□ -0.99
HLA-DOAP06340 FIGNL1-213ENST00000615084 3368 ntAPPRIS P1 TSL 3 BASIC8.87□□□□□ -0.99
HLA-DOAP06340 EMX2OS-206ENST00000551288 7280 ntTSL 1 (best) BASIC8.87□□□□□ -0.99
HLA-DOAP06340 STAMBP-201ENST00000339566 6277 ntAPPRIS P1 TSL 5 BASIC8.87□□□□□ -0.99
HLA-DOAP06340 IQGAP1-201ENST00000268182 7233 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
HLA-DOAP06340 CNTN4-201ENST00000397459 2322 ntTSL 1 (best) BASIC8.87□□□□□ -0.99
HLA-DOAP06340 HTT-201ENST00000355072 13474 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
HLA-DOAP06340 CD36-214ENST00000447544 2298 ntAPPRIS P1 TSL 5 BASIC8.87□□□□□ -0.99
HLA-DOAP06340 AC016930.1-201ENST00000468766 2205 ntBASIC8.87□□□□□ -0.99
HLA-DOAP06340 CKAP2L-201ENST00000302450 4533 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
HLA-DOAP06340 RNA5SP218-201ENST00000363188 109 ntBASIC8.87□□□□□ -0.99
HLA-DOAP06340 THEM5-201ENST00000368817 984 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
HLA-DOAP06340 CYTOR-207ENST00000414584 772 ntTSL 1 (best) BASIC8.87□□□□□ -0.99
HLA-DOAP06340 AC007349.3-201ENST00000415356 872 ntTSL 1 (best) BASIC8.87□□□□□ -0.99
HLA-DOAP06340 AL109924.2-201ENST00000419800 934 ntTSL 1 (best) BASIC8.87□□□□□ -0.99
HLA-DOAP06340 AC114488.2-222ENST00000445166 362 ntTSL 3 BASIC8.87□□□□□ -0.99
HLA-DOAP06340 UBE2V2P4-201ENST00000447495 259 ntBASIC8.87□□□□□ -0.99
HLA-DOAP06340 FGF12-AS3-201ENST00000452848 291 ntTSL 3 BASIC8.87□□□□□ -0.99
HLA-DOAP06340 NPY6R-201ENST00000503807 1112 ntBASIC8.87□□□□□ -0.99
HLA-DOAP06340 C8orf44-205ENST00000521889 598 ntAPPRIS ALT2 TSL 3 BASIC8.87□□□□□ -0.99
HLA-DOAP06340 KNTC1-206ENST00000534995 1065 ntTSL 2 BASIC8.87□□□□□ -0.99
HLA-DOAP06340 RAP1B-230ENST00000543697 734 ntTSL 3 BASIC8.87□□□□□ -0.99
HLA-DOAP06340 PRR13-204ENST00000547368 688 ntAPPRIS ALT2 TSL 3 BASIC8.87□□□□□ -0.99
HLA-DOAP06340 ZNF677-211ENST00000601828 719 ntTSL 2 BASIC8.87□□□□□ -0.99
HLA-DOAP06340 AL050403.2-202ENST00000603462 492 ntTSL 5 BASIC8.87□□□□□ -0.99
HLA-DOAP06340 AC012640.3-201ENST00000607847 430 ntBASIC8.87□□□□□ -0.99
HLA-DOAP06340 AL121985.3-201ENST00000620690 523 ntBASIC8.87□□□□□ -0.99
HLA-DOAP06340 OAZ3-211ENST00000639906 708 ntAPPRIS P2 TSL 5 BASIC8.87□□□□□ -0.99
HLA-DOAP06340 NOS2P3-202ENST00000458685 3328 ntTSL 1 (best) BASIC8.87□□□□□ -0.99
HLA-DOAP06340 DDX10P2-201ENST00000417796 2614 ntBASIC8.87□□□□□ -0.99
HLA-DOAP06340 TMEM246-203ENST00000374851 5070 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
HLA-DOAP06340 IL18RAP-202ENST00000409369 1890 ntTSL 1 (best) BASIC8.87□□□□□ -0.99
HLA-DOAP06340 ACTR6-202ENST00000546902 1877 ntTSL 2 BASIC8.87□□□□□ -0.99
HLA-DOAP06340 ZMYND8-216ENST00000471951 4053 ntAPPRIS ALT2 TSL 1 (best) BASIC8.87□□□□□ -0.99
HLA-DOAP06340 C7-201ENST00000313164 4257 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
HLA-DOAP06340 MGAT4A-201ENST00000264968 8432 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
HLA-DOAP06340 GABRR1-202ENST00000435811 3106 ntTSL 2 BASIC8.87□□□□□ -0.99
HLA-DOAP06340 GON4L-201ENST00000271883 7138 ntAPPRIS P3 TSL 5 BASIC8.87□□□□□ -0.99
HLA-DOAP06340 AC007923.2-201ENST00000584218 1591 ntBASIC8.86□□□□□ -0.99
HLA-DOAP06340 NNT-201ENST00000264663 6483 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
HLA-DOAP06340 ADA2-202ENST00000330232 3195 ntTSL 2 BASIC8.86□□□□□ -0.99
HLA-DOAP06340 DAZ2-207ENST00000382449 3791 ntAPPRIS ALT2 TSL 1 (best) BASIC8.86□□□□□ -0.99
HLA-DOAP06340 MYO1A-203ENST00000442789 3658 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
HLA-DOAP06340 SCN8A-201ENST00000354534 11556 ntAPPRIS P3 TSL 1 (best) BASIC8.86□□□□□ -0.99
HLA-DOAP06340 C3orf49-201ENST00000295896 1292 ntAPPRIS P5 TSL 2 BASIC8.86□□□□□ -0.99
HLA-DOAP06340 SMIM2-201ENST00000400419 822 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
HLA-DOAP06340 AL139135.1-201ENST00000412675 209 ntBASIC8.86□□□□□ -0.99
HLA-DOAP06340 VAV3-203ENST00000415432 1293 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
HLA-DOAP06340 AC127537.1-201ENST00000418183 748 ntBASIC8.86□□□□□ -0.99
HLA-DOAP06340 AL390840.1-201ENST00000420303 988 ntBASIC8.86□□□□□ -0.99
HLA-DOAP06340 C4orf45-201ENST00000434826 1215 ntAPPRIS P1 TSL 2 BASIC8.86□□□□□ -0.99
HLA-DOAP06340 AC244505.2-201ENST00000435089 759 ntBASIC8.86□□□□□ -0.99
HLA-DOAP06340 AL031316.1-202ENST00000441672 449 ntTSL 3 BASIC8.86□□□□□ -0.99
HLA-DOAP06340 LINC01525-201ENST00000442182 511 ntTSL 2 BASIC8.86□□□□□ -0.99
HLA-DOAP06340 MIR4422HG-201ENST00000451250 638 ntTSL 3 BASIC8.86□□□□□ -0.99
HLA-DOAP06340 AC092570.2-201ENST00000452117 1143 ntBASIC8.86□□□□□ -0.99
HLA-DOAP06340 RPS4XP19-201ENST00000460237 736 ntBASIC8.86□□□□□ -0.99
HLA-DOAP06340 TUBBP11-201ENST00000472255 252 ntBASIC8.86□□□□□ -0.99
HLA-DOAP06340 RPL7AP30-201ENST00000482859 796 ntBASIC8.86□□□□□ -0.99
HLA-DOAP06340 RN7SL152P-201ENST00000484176 298 ntBASIC8.86□□□□□ -0.99
HLA-DOAP06340 RPL41-202ENST00000501597 469 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
HLA-DOAP06340 AL355102.4-201ENST00000553638 738 ntTSL 2 BASIC8.86□□□□□ -0.99
HLA-DOAP06340 STX8-209ENST00000574431 731 ntTSL 3 BASIC8.86□□□□□ -0.99
HLA-DOAP06340 RPS4XP16-202ENST00000595905 807 ntTSL 5 BASIC8.86□□□□□ -0.99
HLA-DOAP06340 MIR4435-2HG-219ENST00000609220 883 ntTSL 3 BASIC8.86□□□□□ -0.99
HLA-DOAP06340 IFNA5-201ENST00000610521 987 ntAPPRIS P1 BASIC8.86□□□□□ -0.99
HLA-DOAP06340 AP003400.6-201ENST00000624698 740 ntBASIC8.86□□□□□ -0.99
HLA-DOAP06340 AC087565.2-201ENST00000637695 952 ntTSL 5 BASIC8.86□□□□□ -0.99
HLA-DOAP06340 TNRC6A-201ENST00000315183 8303 ntAPPRIS ALT2 TSL 5 BASIC8.86□□□□□ -0.99
HLA-DOAP06340 GTF2A1-203ENST00000553612 6306 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
HLA-DOAP06340 B3GALT1-201ENST00000392690 5094 ntAPPRIS P1 BASIC8.86□□□□□ -0.99
HLA-DOAP06340 CD46-208ENST00000367042 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC8.86□□□□□ -0.99
HLA-DOAP06340 TIAL1-205ENST00000436547 1401 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
HLA-DOAP06340 PWRN1-211ENST00000568609 1443 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
HLA-DOAP06340 AL353795.1-201ENST00000439134 1775 ntBASIC8.86□□□□□ -0.99
HLA-DOAP06340 MSANTD3-206ENST00000613183 1755 ntAPPRIS P1 TSL 2 BASIC8.86□□□□□ -0.99
HLA-DOAP06340 DTNA-225ENST00000595022 6016 ntAPPRIS ALT2 TSL 1 (best) BASIC8.86□□□□□ -0.99
HLA-DOAP06340 FAM120B-203ENST00000537664 3212 ntAPPRIS ALT2 TSL 2 BASIC8.86□□□□□ -0.99
HLA-DOAP06340 APOOL-203ENST00000622540 6466 ntTSL 5 BASIC8.86□□□□□ -0.99
HLA-DOAP06340 ERVFRD-1-202ENST00000542862 3184 ntAPPRIS P1 BASIC8.85□□□□□ -0.99
HLA-DOAP06340 SERPINA9-205ENST00000448305 1520 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
HLA-DOAP06340 CACNB2-205ENST00000377319 3116 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
HLA-DOAP06340 TBC1D5-219ENST00000446818 3124 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
HLA-DOAP06340 SSXP3-201ENST00000442971 1300 ntBASIC8.85□□□□□ -0.99
HLA-DOAP06340 IYD-202ENST00000344419 8742 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
HLA-DOAP06340 OR10W1-201ENST00000395079 1469 ntAPPRIS P1 BASIC8.85□□□□□ -0.99
HLA-DOAP06340 CDY1-201ENST00000306609 2321 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
HLA-DOAP06340 CDY1B-201ENST00000306882 2321 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
HLA-DOAP06340 ALPK1-201ENST00000177648 4537 ntAPPRIS P3 TSL 1 (best) BASIC8.85□□□□□ -0.99
HLA-DOAP06340 OR4F21-201ENST00000320901 995 ntAPPRIS P1 BASIC8.85□□□□□ -0.99
HLA-DOAP06340 OR4F16-201ENST00000332831 995 ntAPPRIS P1 BASIC8.85□□□□□ -0.99
HLA-DOAP06340 KLRG1-202ENST00000356986 1206 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
HLA-DOAP06340 RNA5SP302-201ENST00000364896 100 ntBASIC8.85□□□□□ -0.99
HLA-DOAP06340 NXT2-204ENST00000372107 937 ntTSL 3 BASIC8.85□□□□□ -0.99
HLA-DOAP06340 OR10A4-201ENST00000379829 995 ntAPPRIS P1 BASIC8.85□□□□□ -0.99
Retrieved 100 of 98,524 protein–RNA pairs in 86.8 ms