Protein–RNA interactions for Protein: P24928

POLR2A, DNA-directed RNA polymerase II subunit RPB1, humanhuman

Known RBP Predictions only

Length 1,970 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2AP24928 AC012497.1-201ENST00000429392 575 ntBASIC8.66□□□□□ -1.02
POLR2AP24928 LINC01681-201ENST00000439184 760 ntTSL 2 BASIC8.66□□□□□ -1.02
POLR2AP24928 LIX1L-AS1-207ENST00000448561 347 ntTSL 3 BASIC8.66□□□□□ -1.02
POLR2AP24928 GAPDHP53-201ENST00000458397 924 ntBASIC8.66□□□□□ -1.02
POLR2AP24928 RPS7P10-201ENST00000464254 603 ntBASIC8.66□□□□□ -1.02
POLR2AP24928 RNA5SP518-201ENST00000515957 119 ntBASIC8.66□□□□□ -1.02
POLR2AP24928 AC009729.1-201ENST00000548873 1133 ntBASIC8.66□□□□□ -1.02
POLR2AP24928 Z99289.1-201ENST00000585373 807 ntTSL 3 BASIC8.66□□□□□ -1.02
POLR2AP24928 RPL7AP69-201ENST00000595306 806 ntBASIC8.66□□□□□ -1.02
POLR2AP24928 ASNSD1-208ENST00000607690 535 ntTSL 2 BASIC8.66□□□□□ -1.02
POLR2AP24928 AL139254.2-202ENST00000641937 1156 ntBASIC8.66□□□□□ -1.02
POLR2AP24928 C9orf131-202ENST00000354479 3184 ntAPPRIS ALT2 TSL 2 BASIC8.66□□□□□ -1.02
POLR2AP24928 OPTN-203ENST00000378748 3521 ntAPPRIS P2 TSL 1 (best) BASIC8.66□□□□□ -1.02
POLR2AP24928 AC013562.1-201ENST00000519427 1722 ntTSL 2 BASIC8.66□□□□□ -1.02
POLR2AP24928 NOLC1-209ENST00000605788 3932 ntAPPRIS P3 TSL 1 (best) BASIC8.65□□□□□ -1.02
POLR2AP24928 BLNK-203ENST00000413476 1599 ntTSL 1 (best) BASIC8.65□□□□□ -1.02
POLR2AP24928 MATR3-232ENST00000502929 4373 ntTSL 2 BASIC8.65□□□□□ -1.02
POLR2AP24928 APP-209ENST00000440126 2846 ntTSL 2 BASIC8.65□□□□□ -1.02
POLR2AP24928 PITRM1-AS1-201ENST00000430356 3998 ntTSL 1 (best) BASIC8.65□□□□□ -1.02
POLR2AP24928 FRMD7-203ENST00000464296 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC8.65□□□□□ -1.02
POLR2AP24928 AL049647.1-201ENST00000319682 1789 ntTSL 2 BASIC8.65□□□□□ -1.02
POLR2AP24928 NOS1-202ENST00000338101 4462 ntTSL 5 BASIC8.65□□□□□ -1.02
POLR2AP24928 TIMM21-204ENST00000580087 2524 ntTSL 5 BASIC8.65□□□□□ -1.02
POLR2AP24928 ZNF878-201ENST00000547628 1734 ntAPPRIS P1 TSL 3 BASIC8.65□□□□□ -1.02
POLR2AP24928 CLEC1B-202ENST00000348658 869 ntTSL 1 (best) BASIC8.65□□□□□ -1.02
POLR2AP24928 MKX-AS1-201ENST00000412244 745 ntTSL 3 BASIC8.65□□□□□ -1.02
POLR2AP24928 ERI3-IT1-201ENST00000414156 619 ntTSL 3 BASIC8.65□□□□□ -1.02
POLR2AP24928 AC010145.1-201ENST00000422415 516 ntTSL 5 BASIC8.65□□□□□ -1.02
POLR2AP24928 NPM1P30-201ENST00000425092 828 ntBASIC8.65□□□□□ -1.02
POLR2AP24928 AP002856.1-201ENST00000447864 562 ntTSL 4 BASIC8.65□□□□□ -1.02
POLR2AP24928 AC005515.1-201ENST00000456368 289 ntTSL 3 BASIC8.65□□□□□ -1.02
POLR2AP24928 AC104339.1-201ENST00000465478 348 ntBASIC8.65□□□□□ -1.02
POLR2AP24928 GCSHP1-201ENST00000512554 484 ntBASIC8.65□□□□□ -1.02
POLR2AP24928 IGHVIII-67-3-201ENST00000517650 232 ntBASIC8.65□□□□□ -1.02
POLR2AP24928 AC027541.1-201ENST00000519306 485 ntTSL 3 BASIC8.65□□□□□ -1.02
POLR2AP24928 OR1E3-201ENST00000575608 948 ntBASIC8.65□□□□□ -1.02
POLR2AP24928 MIR205HG-210ENST00000603283 455 ntTSL 3 BASIC8.65□□□□□ -1.02
POLR2AP24928 GAPDHP41-201ENST00000613707 975 ntBASIC8.65□□□□□ -1.02
POLR2AP24928 AL132796.3-201ENST00000624703 900 ntBASIC8.65□□□□□ -1.02
POLR2AP24928 SMC6-207ENST00000448223 5233 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
POLR2AP24928 CERS6-AS1-201ENST00000425636 2890 ntTSL 1 (best) BASIC8.65□□□□□ -1.02
POLR2AP24928 MUC3A-201ENST00000379458 11226 ntAPPRIS P2 TSL 5 BASIC8.65□□□□□ -1.02
POLR2AP24928 HAUS6-201ENST00000380496 3756 ntTSL 2 BASIC8.65□□□□□ -1.03
POLR2AP24928 KDM4C-205ENST00000428870 3039 ntTSL 2 BASIC8.65□□□□□ -1.03
POLR2AP24928 ZNF250-201ENST00000292579 6364 ntAPPRIS P3 TSL 1 (best) BASIC8.65□□□□□ -1.03
POLR2AP24928 TFRC-203ENST00000420415 4814 ntAPPRIS ALT2 TSL 1 (best) BASIC8.65□□□□□ -1.03
POLR2AP24928 LINC02159-202ENST00000518580 2323 ntTSL 2 BASIC8.65□□□□□ -1.03
POLR2AP24928 CLTCL1-202ENST00000427926 5513 ntAPPRIS P3 TSL 1 (best) BASIC8.65□□□□□ -1.03
POLR2AP24928 CACNB2-205ENST00000377319 3116 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
POLR2AP24928 RN7SKP207-201ENST00000411204 303 ntBASIC8.64□□□□□ -1.03
POLR2AP24928 AL390856.1-201ENST00000412174 628 ntTSL 2 BASIC8.64□□□□□ -1.03
POLR2AP24928 LINC01832-201ENST00000446520 553 ntTSL 4 BASIC8.64□□□□□ -1.03
POLR2AP24928 RPS3AP49-201ENST00000472161 790 ntBASIC8.64□□□□□ -1.03
POLR2AP24928 AC138035.1-201ENST00000499986 992 ntTSL 5 BASIC8.64□□□□□ -1.03
POLR2AP24928 LINC02472-201ENST00000512268 575 ntTSL 2 BASIC8.64□□□□□ -1.03
POLR2AP24928 MINOS1P4-201ENST00000515470 318 ntBASIC8.64□□□□□ -1.03
POLR2AP24928 AC025524.2-206ENST00000517953 439 ntTSL 3 BASIC8.64□□□□□ -1.03
POLR2AP24928 AC023946.1-201ENST00000526867 594 ntTSL 3 BASIC8.64□□□□□ -1.03
POLR2AP24928 LINC01572-205ENST00000570152 360 ntTSL 3 BASIC8.64□□□□□ -1.03
POLR2AP24928 RPS11-202ENST00000594493 575 ntTSL 3 BASIC8.64□□□□□ -1.03
POLR2AP24928 AC010323.2-201ENST00000596405 594 ntBASIC8.64□□□□□ -1.03
POLR2AP24928 AC027271.1-201ENST00000610270 610 ntBASIC8.64□□□□□ -1.03
POLR2AP24928 AP001002.2-201ENST00000625137 386 ntBASIC8.64□□□□□ -1.03
POLR2AP24928 ERBB3-213ENST00000549832 3289 ntTSL 2 BASIC8.64□□□□□ -1.03
POLR2AP24928 ZBTB43-201ENST00000373457 5695 ntAPPRIS P1 BASIC8.64□□□□□ -1.03
POLR2AP24928 GALR1-201ENST00000299727 10044 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
POLR2AP24928 NLK-201ENST00000407008 4047 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
POLR2AP24928 RPRD2-203ENST00000401000 7605 ntAPPRIS ALT2 TSL 1 (best) BASIC8.64□□□□□ -1.03
POLR2AP24928 LDHA-206ENST00000430553 1310 ntTSL 2 BASIC8.64□□□□□ -1.03
POLR2AP24928 PIWIL2-204ENST00000521356 3488 ntTSL 2 BASIC8.64□□□□□ -1.03
POLR2AP24928 LRRC2-AS1-201ENST00000599511 2291 ntBASIC8.64□□□□□ -1.03
POLR2AP24928 BX664727.3-202ENST00000421686 1761 ntTSL 5 BASIC8.64□□□□□ -1.03
POLR2AP24928 AL353795.1-201ENST00000439134 1775 ntBASIC8.64□□□□□ -1.03
POLR2AP24928 AC095038.1-201ENST00000429248 1591 ntBASIC8.64□□□□□ -1.03
POLR2AP24928 AC108451.1-201ENST00000558208 2520 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
POLR2AP24928 NASP-203ENST00000372052 1458 ntAPPRIS ALT2 TSL 5 BASIC8.64□□□□□ -1.03
POLR2AP24928 LRRC37A4P-202ENST00000581296 5372 ntBASIC8.64□□□□□ -1.03
POLR2AP24928 AC010894.3-201ENST00000442996 2400 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
POLR2AP24928 RRM2-201ENST00000304567 3271 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
POLR2AP24928 RPL12P1-201ENST00000374520 498 ntBASIC8.64□□□□□ -1.03
POLR2AP24928 KLF7-IT1-201ENST00000428777 655 ntTSL 2 BASIC8.64□□□□□ -1.03
POLR2AP24928 AC006333.1-204ENST00000429396 648 ntTSL 3 BASIC8.64□□□□□ -1.03
POLR2AP24928 AL954705.1-201ENST00000435277 559 ntBASIC8.64□□□□□ -1.03
POLR2AP24928 AC128689.1-201ENST00000466206 562 ntTSL 4 BASIC8.64□□□□□ -1.03
POLR2AP24928 ZFAND1-204ENST00000517588 633 ntTSL 2 BASIC8.64□□□□□ -1.03
POLR2AP24928 AC021001.1-201ENST00000518703 987 ntBASIC8.64□□□□□ -1.03
POLR2AP24928 AC005363.1-201ENST00000530779 351 ntBASIC8.64□□□□□ -1.03
POLR2AP24928 ALG9-IT1-201ENST00000531305 684 ntTSL 3 BASIC8.64□□□□□ -1.03
POLR2AP24928 HNRNPA1P71-201ENST00000559135 950 ntBASIC8.64□□□□□ -1.03
POLR2AP24928 PPIAP14-201ENST00000577627 496 ntBASIC8.64□□□□□ -1.03
POLR2AP24928 AC015818.3-202ENST00000579603 283 ntTSL 5 BASIC8.64□□□□□ -1.03
POLR2AP24928 AL078623.1-201ENST00000602702 907 ntBASIC8.64□□□□□ -1.03
POLR2AP24928 AL353622.1-201ENST00000604716 1945 ntBASIC8.64□□□□□ -1.03
POLR2AP24928 LINC01653-201ENST00000456026 1728 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
POLR2AP24928 YES1-201ENST00000314574 4441 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
POLR2AP24928 MEF2C-222ENST00000514028 3393 ntTSL 5 BASIC8.64□□□□□ -1.03
POLR2AP24928 DOCK11-202ENST00000276204 6664 ntAPPRIS ALT1 TSL 5 BASIC8.64□□□□□ -1.03
POLR2AP24928 TRIM49D1-203ENST00000605881 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC8.64□□□□□ -1.03
POLR2AP24928 SMN2-214ENST00000626847 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC8.64□□□□□ -1.03
POLR2AP24928 AC024132.1-201ENST00000382007 2509 ntTSL 2 BASIC8.64□□□□□ -1.03
Retrieved 100 of 98,524 protein–RNA pairs in 59.4 ms