Protein–RNA interactions for Protein: P04436

T-cell receptor alpha chain V region HPB-MLT (Fragment), humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04436 LINC00559-201ENST00000569476 3867 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
P04436 RSRC2-201ENST00000331738 3520 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
P04436 SLC39A12-204ENST00000539911 2461 ntTSL 2 BASIC6.95□□□□□ -1.3
P04436 LINC01747-203ENST00000634603 1377 ntTSL 4 BASIC6.95□□□□□ -1.3
P04436 SUPT7L-205ENST00000464789 2664 ntAPPRIS ALT1 TSL 5 BASIC6.95□□□□□ -1.3
P04436 BBS12-203ENST00000542236 3431 ntAPPRIS P1 TSL 2 BASIC6.95□□□□□ -1.3
P04436 CWC15-201ENST00000279839 1576 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
P04436 ALPK2-201ENST00000361673 7303 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
P04436 AL121936.1-201ENST00000641660 2884 ntBASIC6.95□□□□□ -1.3
P04436 MSANTD3-206ENST00000613183 1755 ntAPPRIS P1 TSL 2 BASIC6.95□□□□□ -1.3
P04436 RPL14-201ENST00000338970 7072 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
P04436 KMT2A-213ENST00000534358 16602 ntAPPRIS ALT2 TSL 1 (best) BASIC6.95□□□□□ -1.3
P04436 TRIM60P14-201ENST00000513444 1419 ntBASIC6.95□□□□□ -1.3
P04436 DCAF5-208ENST00000556847 2791 ntTSL 5 BASIC6.95□□□□□ -1.3
P04436 RN7SKP211-201ENST00000363328 315 ntBASIC6.95□□□□□ -1.3
P04436 DPM1-201ENST00000371582 1161 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
P04436 AL590143.1-201ENST00000405071 138 ntBASIC6.95□□□□□ -1.3
P04436 SRSF7-202ENST00000409276 1050 ntTSL 5 BASIC6.95□□□□□ -1.3
P04436 AC023141.10-201ENST00000415634 200 ntBASIC6.95□□□□□ -1.3
P04436 GAPDHP55-201ENST00000423136 803 ntBASIC6.95□□□□□ -1.3
P04436 WWC3-AS1-201ENST00000430057 578 ntTSL 3 BASIC6.95□□□□□ -1.3
P04436 AC105393.2-201ENST00000431911 549 ntTSL 4 BASIC6.95□□□□□ -1.3
P04436 AC019185.3-201ENST00000438805 323 ntBASIC6.95□□□□□ -1.3
P04436 AC074286.1-202ENST00000441205 567 ntTSL 5 BASIC6.95□□□□□ -1.3
P04436 LINC00578-202ENST00000442937 612 ntTSL 3 BASIC6.95□□□□□ -1.3
P04436 AL031736.1-201ENST00000449688 618 ntBASIC6.95□□□□□ -1.3
P04436 AC104389.2-201ENST00000450768 887 ntBASIC6.95□□□□□ -1.3
P04436 C4orf19-203ENST00000508175 828 ntTSL 3 BASIC6.95□□□□□ -1.3
P04436 IGKV3D-31-201ENST00000519131 281 ntBASIC6.95□□□□□ -1.3
P04436 AC091182.2-201ENST00000520431 578 ntTSL 4 BASIC6.95□□□□□ -1.3
P04436 TPT1-AS1-213ENST00000521336 759 ntTSL 5 BASIC6.95□□□□□ -1.3
P04436 SNX18P27-201ENST00000523611 779 ntBASIC6.95□□□□□ -1.3
P04436 AP001781.2-201ENST00000529841 783 ntTSL 3 BASIC6.95□□□□□ -1.3
P04436 FXYD2-206ENST00000532119 562 ntAPPRIS P1 TSL 3 BASIC6.95□□□□□ -1.3
P04436 AC006581.1-201ENST00000545706 496 ntTSL 3 BASIC6.95□□□□□ -1.3
P04436 COX6CP11-201ENST00000555293 229 ntBASIC6.95□□□□□ -1.3
P04436 AL049869.4-201ENST00000555669 178 ntBASIC6.95□□□□□ -1.3
P04436 AL118558.1-201ENST00000557551 566 ntTSL 3 BASIC6.95□□□□□ -1.3
P04436 AC012291.1-201ENST00000559666 429 ntTSL 5 BASIC6.95□□□□□ -1.3
P04436 TRIM69-210ENST00000561043 1017 ntTSL 3 BASIC6.95□□□□□ -1.3
P04436 LINC01989-201ENST00000566930 1081 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
P04436 AC099518.1-201ENST00000568032 841 ntTSL 3 BASIC6.95□□□□□ -1.3
P04436 AC012181.2-201ENST00000570210 699 ntBASIC6.95□□□□□ -1.3
P04436 MIR4685-201ENST00000578185 69 ntBASIC6.95□□□□□ -1.3
P04436 TTN-AS1-215ENST00000585451 949 ntTSL 5 BASIC6.95□□□□□ -1.3
P04436 AL050343.1-203ENST00000586761 1290 ntTSL 3 BASIC6.95□□□□□ -1.3
P04436 LINC00632-203ENST00000602535 723 ntTSL 5 BASIC6.95□□□□□ -1.3
P04436 TTN-AS1-265ENST00000627661 806 ntTSL 5 BASIC6.95□□□□□ -1.3
P04436 OR13D1-202ENST00000641530 945 ntAPPRIS P1 BASIC6.95□□□□□ -1.3
P04436 LINC01990-201ENST00000609293 1487 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
P04436 TRRAP-201ENST00000355540 12590 ntAPPRIS P3 TSL 1 (best) BASIC6.95□□□□□ -1.3
P04436 AC008498.2-201ENST00000624033 2322 ntBASIC6.95□□□□□ -1.3
P04436 FOLH1B-202ENST00000529567 2145 ntBASIC6.95□□□□□ -1.3
P04436 ZNF710-AS1-202ENST00000620791 2133 ntBASIC6.95□□□□□ -1.3
P04436 LINC00954-202ENST00000449086 2995 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
P04436 NAT10-205ENST00000531159 3436 ntAPPRIS ALT2 TSL 2 BASIC6.95□□□□□ -1.3
P04436 AC027097.2-201ENST00000588925 1976 ntTSL 2 BASIC6.95□□□□□ -1.3
P04436 HEATR9-207ENST00000604834 1974 ntAPPRIS P3 TSL 1 (best) BASIC6.95□□□□□ -1.3
P04436 VSIG1-202ENST00000415430 3236 ntAPPRIS ALT2 TSL 2 BASIC6.95□□□□□ -1.3
P04436 APP-209ENST00000440126 2846 ntTSL 2 BASIC6.95□□□□□ -1.3
P04436 NOS1-206ENST00000618760 12283 ntTSL 5 BASIC6.95□□□□□ -1.3
P04436 GPR1-203ENST00000437420 1557 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
P04436 TMPPE-202ENST00000416695 3451 ntAPPRIS ALT2 TSL 2 BASIC6.95□□□□□ -1.3
P04436 FO393409.1-201ENST00000399325 1372 ntBASIC6.95□□□□□ -1.3
P04436 NCOA4-204ENST00000581486 3549 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
P04436 CCDC171-201ENST00000380701 6512 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
P04436 AC005840.3-201ENST00000541888 1803 ntTSL 5 BASIC6.94□□□□□ -1.3
P04436 LINC02026-201ENST00000397645 1615 ntTSL 2 BASIC6.94□□□□□ -1.3
P04436 AC063923.1-201ENST00000478982 1619 ntBASIC6.94□□□□□ -1.3
P04436 PTP4A2-218ENST00000602725 3353 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
P04436 KYNUP1-201ENST00000466683 1406 ntBASIC6.94□□□□□ -1.3
P04436 PRLR-213ENST00000514088 1440 ntTSL 5 BASIC6.94□□□□□ -1.3
P04436 NQO1-203ENST00000379047 2527 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
P04436 BRD8-203ENST00000402931 2982 ntTSL 5 BASIC6.94□□□□□ -1.3
P04436 ANO6-201ENST00000320560 5975 ntAPPRIS P3 TSL 1 (best) BASIC6.94□□□□□ -1.3
P04436 WNK3-203ENST00000375169 11172 ntAPPRIS ALT1 TSL 5 BASIC6.94□□□□□ -1.3
P04436 KIF6-208ENST00000538893 2386 ntTSL 5 BASIC6.94□□□□□ -1.3
P04436 S100Z-201ENST00000317593 1468 ntAPPRIS P1 TSL 3 BASIC6.94□□□□□ -1.3
P04436 POGZ-218ENST00000531094 4415 ntAPPRIS ALT1 TSL 2 BASIC6.94□□□□□ -1.3
P04436 KCTD6-201ENST00000355076 2425 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
P04436 HIST1H4F-201ENST00000244537 312 ntAPPRIS P1 BASIC6.94□□□□□ -1.3
P04436 NR1I3-203ENST00000367981 1076 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
P04436 HHLA3-203ENST00000370940 775 ntAPPRIS ALT2 TSL 1 (best) BASIC6.94□□□□□ -1.3
P04436 TRBV6-6-201ENST00000390371 388 ntAPPRIS P1 BASIC6.94□□□□□ -1.3
P04436 PTMAP8-201ENST00000397729 342 ntBASIC6.94□□□□□ -1.3
P04436 PPIAP30-201ENST00000415473 519 ntBASIC6.94□□□□□ -1.3
P04436 AC008758.2-201ENST00000420038 695 ntTSL 2 BASIC6.94□□□□□ -1.3
P04436 SNX18P14-201ENST00000429308 574 ntBASIC6.94□□□□□ -1.3
P04436 TAAR9-201ENST00000434551 1047 ntAPPRIS P1 BASIC6.94□□□□□ -1.3
P04436 AC091730.1-201ENST00000440455 692 ntTSL 3 BASIC6.94□□□□□ -1.3
P04436 TULP3P1-201ENST00000442322 816 ntTSL 3 BASIC6.94□□□□□ -1.3
P04436 LINC01706-201ENST00000455299 748 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
P04436 AC018475.1-201ENST00000478358 465 ntBASIC6.94□□□□□ -1.3
P04436 RN7SL182P-201ENST00000496499 300 ntBASIC6.94□□□□□ -1.3
P04436 AP004833.1-201ENST00000507987 1238 ntBASIC6.94□□□□□ -1.3
P04436 LACTB2-AS1-204ENST00000519167 793 ntTSL 3 BASIC6.94□□□□□ -1.3
P04436 RDH10-203ENST00000519380 978 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
P04436 FLJ46284-202ENST00000521148 496 ntTSL 3 BASIC6.94□□□□□ -1.3
P04436 AC084880.4-201ENST00000538405 577 ntTSL 2 BASIC6.94□□□□□ -1.3
P04436 LINC00640-201ENST00000554409 498 ntTSL 3 BASIC6.94□□□□□ -1.3
Retrieved 100 of 98,524 protein–RNA pairs in 72 ms