Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 AC087499.3-202ENST00000441215 1173 ntBASIC7.12□□□□□ -1.27
SNX18Q96RF0 CD59-206ENST00000445143 825 ntAPPRIS P2 TSL 3 BASIC7.12□□□□□ -1.27
SNX18Q96RF0 VN1R96P-201ENST00000446052 858 ntBASIC7.12□□□□□ -1.27
SNX18Q96RF0 LINC01320-202ENST00000453774 1205 ntTSL 3 BASIC7.12□□□□□ -1.27
SNX18Q96RF0 RN7SL395P-201ENST00000462960 291 ntBASIC7.12□□□□□ -1.27
SNX18Q96RF0 AC074051.1-201ENST00000470389 781 ntBASIC7.12□□□□□ -1.27
SNX18Q96RF0 RN7SL505P-201ENST00000482644 293 ntBASIC7.12□□□□□ -1.27
SNX18Q96RF0 AC018695.1-201ENST00000484096 664 ntBASIC7.12□□□□□ -1.27
SNX18Q96RF0 AP000926.3-201ENST00000497201 299 ntBASIC7.12□□□□□ -1.27
SNX18Q96RF0 UCHL1-AS1-201ENST00000507190 592 ntTSL 4 BASIC7.12□□□□□ -1.27
SNX18Q96RF0 SELENOP-204ENST00000507920 786 ntTSL 5 BASIC7.12□□□□□ -1.27
SNX18Q96RF0 RN7SKP190-201ENST00000516079 286 ntBASIC7.12□□□□□ -1.27
SNX18Q96RF0 IGHV7-40-201ENST00000520963 296 ntBASIC7.12□□□□□ -1.27
SNX18Q96RF0 AC091820.1-201ENST00000523497 648 ntTSL 4 BASIC7.12□□□□□ -1.27
SNX18Q96RF0 AP003499.1-201ENST00000527217 574 ntBASIC7.12□□□□□ -1.27
SNX18Q96RF0 SERPINA9-208ENST00000546329 1156 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
SNX18Q96RF0 AC008870.2-201ENST00000568262 1024 ntBASIC7.12□□□□□ -1.27
SNX18Q96RF0 MRPS21P9-201ENST00000571150 257 ntBASIC7.12□□□□□ -1.27
SNX18Q96RF0 AC021382.2-201ENST00000584547 922 ntTSL 3 BASIC7.12□□□□□ -1.27
SNX18Q96RF0 PRELID3BP3-201ENST00000584963 545 ntBASIC7.12□□□□□ -1.27
SNX18Q96RF0 AC010680.5-201ENST00000605021 463 ntBASIC7.12□□□□□ -1.27
SNX18Q96RF0 CASC19-212ENST00000641153 1287 ntBASIC7.12□□□□□ -1.27
SNX18Q96RF0 RBM25-201ENST00000261973 6910 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
SNX18Q96RF0 CEACAM5-202ENST00000398599 2451 ntAPPRIS ALT2 TSL 5 BASIC7.12□□□□□ -1.27
SNX18Q96RF0 ENTPD5-207ENST00000557325 3096 ntTSL 2 BASIC7.12□□□□□ -1.27
SNX18Q96RF0 BEST3-212ENST00000553096 2929 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
SNX18Q96RF0 EIF1-203ENST00000469257 2330 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
SNX18Q96RF0 ATP9B-208ENST00000586722 1650 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
SNX18Q96RF0 MELK-211ENST00000545008 2236 ntTSL 2 BASIC7.12□□□□□ -1.27
SNX18Q96RF0 CACNB2-213ENST00000612134 3825 ntTSL 5 BASIC7.12□□□□□ -1.27
SNX18Q96RF0 BBX-207ENST00000416476 2178 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
SNX18Q96RF0 KLRC1-207ENST00000544822 1600 ntAPPRIS P4 TSL 1 (best) BASIC7.12□□□□□ -1.27
SNX18Q96RF0 ZADH2-202ENST00000537114 3205 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
SNX18Q96RF0 OR9M1P-202ENST00000641564 3163 ntBASIC7.12□□□□□ -1.27
SNX18Q96RF0 ITPK1-AS1-201ENST00000553639 4701 ntBASIC7.12□□□□□ -1.27
SNX18Q96RF0 MDM4-215ENST00000614459 9782 ntTSL 5 BASIC7.12□□□□□ -1.27
SNX18Q96RF0 SCRN3-201ENST00000272732 3037 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
SNX18Q96RF0 ZC3H11B-202ENST00000636126 4432 ntAPPRIS ALT1 TSL 2 BASIC7.11□□□□□ -1.27
SNX18Q96RF0 NQO1-201ENST00000320623 2912 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
SNX18Q96RF0 AL390036.1-202ENST00000634635 2439 ntTSL 5 BASIC7.11□□□□□ -1.27
SNX18Q96RF0 NSUN4-208ENST00000498008 3867 ntTSL 2 BASIC7.11□□□□□ -1.27
SNX18Q96RF0 ARFGEF3-201ENST00000251691 14877 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
SNX18Q96RF0 POLR1B-204ENST00000417433 3836 ntTSL 2 BASIC7.11□□□□□ -1.27
SNX18Q96RF0 ATP2B4-201ENST00000341360 4658 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
SNX18Q96RF0 MAP4-209ENST00000434267 2772 ntTSL 2 BASIC7.11□□□□□ -1.27
SNX18Q96RF0 CACNB4-269ENST00000638005 4615 ntTSL 2 BASIC7.11□□□□□ -1.27
SNX18Q96RF0 CYFIP2-210ENST00000522463 3477 ntTSL 2 BASIC7.11□□□□□ -1.27
SNX18Q96RF0 GPN2-201ENST00000374133 715 ntTSL 3 BASIC7.11□□□□□ -1.27
SNX18Q96RF0 LST1-211ENST00000376110 433 ntTSL 3 BASIC7.11□□□□□ -1.27
SNX18Q96RF0 RN7SKP261-201ENST00000410948 278 ntBASIC7.11□□□□□ -1.27
SNX18Q96RF0 AC009518.1-202ENST00000415393 1229 ntTSL 2 BASIC7.11□□□□□ -1.27
SNX18Q96RF0 SMARCA2-211ENST00000417599 980 ntTSL 5 BASIC7.11□□□□□ -1.27
SNX18Q96RF0 AC006450.2-201ENST00000429482 581 ntTSL 2 BASIC7.11□□□□□ -1.27
SNX18Q96RF0 CDH13-203ENST00000431540 831 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
SNX18Q96RF0 ANKRD54P1-201ENST00000433115 471 ntBASIC7.11□□□□□ -1.27
SNX18Q96RF0 AL450384.2-202ENST00000436485 656 ntTSL 3 BASIC7.11□□□□□ -1.27
SNX18Q96RF0 RPS13P2-201ENST00000437890 455 ntBASIC7.11□□□□□ -1.27
SNX18Q96RF0 RPL37A-204ENST00000441179 529 ntTSL 5 BASIC7.11□□□□□ -1.27
SNX18Q96RF0 AL445686.1-201ENST00000443086 348 ntBASIC7.11□□□□□ -1.27
SNX18Q96RF0 AL136982.6-201ENST00000444180 1238 ntTSL 2 BASIC7.11□□□□□ -1.27
SNX18Q96RF0 Z82173.1-201ENST00000453924 484 ntTSL 3 BASIC7.11□□□□□ -1.27
SNX18Q96RF0 GRIK1-AS1-205ENST00000455392 767 ntTSL 3 BASIC7.11□□□□□ -1.27
SNX18Q96RF0 AL133232.1-201ENST00000458293 483 ntTSL 5 BASIC7.11□□□□□ -1.27
SNX18Q96RF0 AF279873.2-201ENST00000468681 744 ntBASIC7.11□□□□□ -1.27
SNX18Q96RF0 RPL5P16-201ENST00000471467 790 ntBASIC7.11□□□□□ -1.27
SNX18Q96RF0 RPL23AP68-201ENST00000480924 445 ntBASIC7.11□□□□□ -1.27
SNX18Q96RF0 RN7SL608P-201ENST00000492377 279 ntBASIC7.11□□□□□ -1.27
SNX18Q96RF0 HSPE1P10-201ENST00000508631 558 ntBASIC7.11□□□□□ -1.27
SNX18Q96RF0 SDHC-208ENST00000513009 369 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
SNX18Q96RF0 PIGFP1-201ENST00000519180 653 ntBASIC7.11□□□□□ -1.27
SNX18Q96RF0 AC013643.2-201ENST00000521510 584 ntTSL 4 BASIC7.11□□□□□ -1.27
SNX18Q96RF0 AC087627.1-201ENST00000522339 993 ntTSL 3 BASIC7.11□□□□□ -1.27
SNX18Q96RF0 OPRK1-204ENST00000524278 1195 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
SNX18Q96RF0 AC127526.3-201ENST00000534291 450 ntTSL 3 BASIC7.11□□□□□ -1.27
SNX18Q96RF0 CDH13-207ENST00000565636 810 ntTSL 5 BASIC7.11□□□□□ -1.27
SNX18Q96RF0 AP001025.3-201ENST00000578787 864 ntTSL 3 BASIC7.11□□□□□ -1.27
SNX18Q96RF0 APOC2-202ENST00000585786 880 ntTSL 2 BASIC7.11□□□□□ -1.27
SNX18Q96RF0 AC005495.1-201ENST00000586611 1211 ntBASIC7.11□□□□□ -1.27
SNX18Q96RF0 APOC2-204ENST00000591597 447 ntTSL 5 BASIC7.11□□□□□ -1.27
SNX18Q96RF0 ZNF85-206ENST00000596476 1259 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
SNX18Q96RF0 AC005387.1-201ENST00000597837 352 ntTSL 3 BASIC7.11□□□□□ -1.27
SNX18Q96RF0 AC007785.1-201ENST00000597989 332 ntTSL 5 BASIC7.11□□□□□ -1.27
SNX18Q96RF0 AL133406.3-201ENST00000606817 541 ntBASIC7.11□□□□□ -1.27
SNX18Q96RF0 LINC01396-201ENST00000609099 527 ntTSL 3 BASIC7.11□□□□□ -1.27
SNX18Q96RF0 TSHZ2-205ENST00000626626 670 ntBASIC7.11□□□□□ -1.27
SNX18Q96RF0 LINC01125-248ENST00000627284 700 ntAPPRIS ALT2 TSL 5 BASIC7.11□□□□□ -1.27
SNX18Q96RF0 SORBS1-202ENST00000306402 5858 ntAPPRIS ALT2 TSL 1 (best) BASIC7.11□□□□□ -1.27
SNX18Q96RF0 AKT3-202ENST00000336199 1688 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
SNX18Q96RF0 FZD3-204ENST00000537916 13740 ntAPPRIS P1 TSL 2 BASIC7.11□□□□□ -1.27
SNX18Q96RF0 LINC02347-201ENST00000397346 2458 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
SNX18Q96RF0 ORC3-206ENST00000546266 2470 ntTSL 2 BASIC7.11□□□□□ -1.27
SNX18Q96RF0 ZNF229-204ENST00000614049 4507 ntAPPRIS P3 TSL 1 (best) BASIC7.11□□□□□ -1.27
SNX18Q96RF0 DNAH17-202ENST00000585328 13708 ntAPPRIS ALT2 TSL 5 BASIC7.11□□□□□ -1.27
SNX18Q96RF0 VPS53-204ENST00000437048 13106 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
SNX18Q96RF0 EPHA4-201ENST00000281821 6346 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
SNX18Q96RF0 ZNF292-202ENST00000369577 10610 ntAPPRIS P2 TSL 1 (best) BASIC7.11□□□□□ -1.27
SNX18Q96RF0 GPBP1-203ENST00000424459 4683 ntAPPRIS ALT2 TSL 5 BASIC7.11□□□□□ -1.27
SNX18Q96RF0 NXPE3-203ENST00000477909 3450 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
SNX18Q96RF0 SLC36A4-206ENST00000529184 1917 ntTSL 2 BASIC7.11□□□□□ -1.27
SNX18Q96RF0 KIDINS220-202ENST00000319688 3765 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
Retrieved 100 of 98,524 protein–RNA pairs in 82.5 ms