Protein–RNA interactions for Protein: Q9P0W2

HMG20B, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1-related, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20BQ9P0W2 LINC01482-201ENST00000585484 2616 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
HMG20BQ9P0W2 HIST1H2BN-203ENST00000606613 4137 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
HMG20BQ9P0W2 EPHA4-201ENST00000281821 6346 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
HMG20BQ9P0W2 AC016831.3-201ENST00000446451 1723 ntBASIC9.29□□□□□ -0.92
HMG20BQ9P0W2 DSG3-201ENST00000257189 5525 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
HMG20BQ9P0W2 NDE1-202ENST00000396355 3936 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
HMG20BQ9P0W2 DCAF5-208ENST00000556847 2791 ntTSL 5 BASIC9.29□□□□□ -0.92
HMG20BQ9P0W2 BTK-210ENST00000621635 2767 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
HMG20BQ9P0W2 PRLR-202ENST00000310101 1297 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
HMG20BQ9P0W2 SP140-202ENST00000373645 814 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
HMG20BQ9P0W2 IL6-202ENST00000401630 765 ntTSL 5 BASIC9.29□□□□□ -0.92
HMG20BQ9P0W2 RN7SKP236-201ENST00000410635 284 ntBASIC9.29□□□□□ -0.92
HMG20BQ9P0W2 AC092162.2-203ENST00000430460 579 ntTSL 4 BASIC9.29□□□□□ -0.92
HMG20BQ9P0W2 LINC02556-201ENST00000450776 346 ntTSL 3 BASIC9.29□□□□□ -0.92
HMG20BQ9P0W2 LINC01105-205ENST00000450794 580 ntTSL 4 BASIC9.29□□□□□ -0.92
HMG20BQ9P0W2 LINC00652-202ENST00000454749 963 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
HMG20BQ9P0W2 GRHL1-206ENST00000480736 572 ntTSL 4 BASIC9.29□□□□□ -0.92
HMG20BQ9P0W2 FTH1P23-201ENST00000492727 550 ntBASIC9.29□□□□□ -0.92
HMG20BQ9P0W2 IGHVIII-13-1-201ENST00000517613 291 ntBASIC9.29□□□□□ -0.92
HMG20BQ9P0W2 OR7E96P-201ENST00000530816 976 ntBASIC9.29□□□□□ -0.92
HMG20BQ9P0W2 OR7E87P-201ENST00000532397 929 ntBASIC9.29□□□□□ -0.92
HMG20BQ9P0W2 AC012291.1-201ENST00000559666 429 ntTSL 5 BASIC9.29□□□□□ -0.92
HMG20BQ9P0W2 AC023310.4-201ENST00000613130 650 ntBASIC9.29□□□□□ -0.92
HMG20BQ9P0W2 AL353626.1-201ENST00000613429 507 ntTSL 5 BASIC9.29□□□□□ -0.92
HMG20BQ9P0W2 AC129908.1-201ENST00000624553 648 ntBASIC9.29□□□□□ -0.92
HMG20BQ9P0W2 SLC22A9-201ENST00000279178 2343 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
HMG20BQ9P0W2 COLGALT2-202ENST00000367520 2325 ntTSL 2 BASIC9.29□□□□□ -0.92
HMG20BQ9P0W2 TLR3-202ENST00000504367 2310 ntTSL 2 BASIC9.29□□□□□ -0.92
HMG20BQ9P0W2 C7orf73-202ENST00000507606 2450 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
HMG20BQ9P0W2 CD86-202ENST00000330540 2708 ntAPPRIS P3 TSL 1 (best) BASIC9.29□□□□□ -0.92
HMG20BQ9P0W2 SLC2A3-201ENST00000075120 3915 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
HMG20BQ9P0W2 FANCL-201ENST00000233741 1683 ntAPPRIS P3 TSL 1 (best) BASIC9.29□□□□□ -0.92
HMG20BQ9P0W2 FANCL-202ENST00000402135 1698 ntAPPRIS ALT1 TSL 2 BASIC9.29□□□□□ -0.92
HMG20BQ9P0W2 ATF2-203ENST00000392544 1919 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
HMG20BQ9P0W2 CASC23-201ENST00000534076 1563 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
HMG20BQ9P0W2 SEMA6A-210ENST00000510263 3292 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
HMG20BQ9P0W2 ZHX3-218ENST00000560364 4283 ntTSL 5 BASIC9.28□□□□□ -0.92
HMG20BQ9P0W2 ARHGEF12-201ENST00000356641 6891 ntTSL 5 BASIC9.28□□□□□ -0.92
HMG20BQ9P0W2 HTT-201ENST00000355072 13474 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
HMG20BQ9P0W2 CASP14-201ENST00000427043 3241 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
HMG20BQ9P0W2 ZRANB1-201ENST00000359653 5695 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
HMG20BQ9P0W2 LRRC37A2-201ENST00000333412 5177 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
HMG20BQ9P0W2 PDE4DIP-203ENST00000369349 4677 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
HMG20BQ9P0W2 MIR17HG-202ENST00000581816 2032 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
HMG20BQ9P0W2 RASGRP3-202ENST00000403687 4807 ntAPPRIS P3 TSL 1 (best) BASIC9.28□□□□□ -0.92
HMG20BQ9P0W2 SUPT7L-205ENST00000464789 2664 ntAPPRIS ALT1 TSL 5 BASIC9.28□□□□□ -0.92
HMG20BQ9P0W2 RN7SKP207-201ENST00000411204 303 ntBASIC9.28□□□□□ -0.92
HMG20BQ9P0W2 SNX18P13-201ENST00000412442 529 ntBASIC9.28□□□□□ -0.92
HMG20BQ9P0W2 AL031584.2-201ENST00000420585 767 ntTSL 3 BASIC9.28□□□□□ -0.92
HMG20BQ9P0W2 AC123904.1-201ENST00000441072 368 ntBASIC9.28□□□□□ -0.92
HMG20BQ9P0W2 LINC00331-201ENST00000446391 376 ntTSL 5 BASIC9.28□□□□□ -0.92
HMG20BQ9P0W2 AC114755.1-201ENST00000453101 868 ntBASIC9.28□□□□□ -0.92
HMG20BQ9P0W2 LINC01006-207ENST00000458645 738 ntTSL 4 BASIC9.28□□□□□ -0.92
HMG20BQ9P0W2 TAAR3P-201ENST00000466706 1078 ntBASIC9.28□□□□□ -0.92
HMG20BQ9P0W2 AC018475.1-201ENST00000478358 465 ntBASIC9.28□□□□□ -0.92
HMG20BQ9P0W2 TAAR3P-202ENST00000481759 1025 ntBASIC9.28□□□□□ -0.92
HMG20BQ9P0W2 PSD2-AS1-201ENST00000515306 412 ntTSL 3 BASIC9.28□□□□□ -0.92
HMG20BQ9P0W2 AC040934.1-201ENST00000523101 513 ntTSL 2 BASIC9.28□□□□□ -0.92
HMG20BQ9P0W2 AC009119.1-202ENST00000567342 543 ntTSL 4 BASIC9.28□□□□□ -0.92
HMG20BQ9P0W2 OR5AH1P-201ENST00000595968 283 ntBASIC9.28□□□□□ -0.92
HMG20BQ9P0W2 AL669942.1-206ENST00000610473 783 ntTSL 3 BASIC9.28□□□□□ -0.92
HMG20BQ9P0W2 AC233702.2-201ENST00000618784 583 ntTSL 4 BASIC9.28□□□□□ -0.92
HMG20BQ9P0W2 AC241377.2-202ENST00000636462 997 ntBASIC9.28□□□□□ -0.92
HMG20BQ9P0W2 BBX-207ENST00000416476 2178 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
HMG20BQ9P0W2 ZNF24-204ENST00000589881 7419 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
HMG20BQ9P0W2 PLEKHS1-202ENST00000361048 3249 ntAPPRIS P3 TSL 2 BASIC9.28□□□□□ -0.92
HMG20BQ9P0W2 PLEKHS1-207ENST00000619563 3247 ntTSL 5 BASIC9.28□□□□□ -0.92
HMG20BQ9P0W2 ENTPD5-201ENST00000334696 5842 ntAPPRIS P1 TSL 5 BASIC9.28□□□□□ -0.92
HMG20BQ9P0W2 THOC1-201ENST00000261600 2087 ntAPPRIS P2 TSL 1 (best) BASIC9.28□□□□□ -0.92
HMG20BQ9P0W2 GAN-202ENST00000568107 15244 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
HMG20BQ9P0W2 SOCS5P5-201ENST00000402732 1586 ntBASIC9.28□□□□□ -0.92
HMG20BQ9P0W2 CCNT2-202ENST00000295238 4491 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
HMG20BQ9P0W2 AC016747.1-201ENST00000420918 2532 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
HMG20BQ9P0W2 IL18RAP-202ENST00000409369 1890 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
HMG20BQ9P0W2 TNPO1-201ENST00000337273 11183 ntTSL 1 (best) BASIC9.27□□□□□ -0.92
HMG20BQ9P0W2 FBXO30-201ENST00000237281 9009 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.92
HMG20BQ9P0W2 TM4SF1-201ENST00000305366 1771 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.92
HMG20BQ9P0W2 FOXJ3-205ENST00000372573 5309 ntAPPRIS P3 TSL 2 BASIC9.27□□□□□ -0.92
HMG20BQ9P0W2 WDR64-204ENST00000437684 2310 ntTSL 1 (best) BASIC9.27□□□□□ -0.92
HMG20BQ9P0W2 ZNF200-203ENST00000396871 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC9.27□□□□□ -0.93
HMG20BQ9P0W2 SORBS1-208ENST00000371241 2055 ntAPPRIS ALT2 TSL 5 BASIC9.27□□□□□ -0.93
HMG20BQ9P0W2 ARG1-203ENST00000368087 1532 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
HMG20BQ9P0W2 OR8D4-202ENST00000641687 2904 ntAPPRIS P1 BASIC9.27□□□□□ -0.93
HMG20BQ9P0W2 RPS20-205ENST00000519807 1826 ntTSL 2 BASIC9.27□□□□□ -0.93
HMG20BQ9P0W2 DAZ2-208ENST00000400493 3516 ntAPPRIS ALT2 TSL 1 (best) BASIC9.27□□□□□ -0.93
HMG20BQ9P0W2 ORM1-201ENST00000259396 802 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
HMG20BQ9P0W2 REG3G-203ENST00000409471 575 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
HMG20BQ9P0W2 USP32P1-203ENST00000417524 1014 ntTSL 5 BASIC9.27□□□□□ -0.93
HMG20BQ9P0W2 AC008758.2-201ENST00000420038 695 ntTSL 2 BASIC9.27□□□□□ -0.93
HMG20BQ9P0W2 SNX18P3-201ENST00000424993 835 ntBASIC9.27□□□□□ -0.93
HMG20BQ9P0W2 AC019055.1-201ENST00000432822 443 ntTSL 3 BASIC9.27□□□□□ -0.93
HMG20BQ9P0W2 AL929410.2-201ENST00000451170 189 ntBASIC9.27□□□□□ -0.93
HMG20BQ9P0W2 LINC01364-201ENST00000452509 889 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
HMG20BQ9P0W2 CHIAP1-201ENST00000456220 995 ntBASIC9.27□□□□□ -0.93
HMG20BQ9P0W2 TDGF1P6-201ENST00000463873 448 ntBASIC9.27□□□□□ -0.93
HMG20BQ9P0W2 LINC00881-201ENST00000467995 589 ntTSL 4 BASIC9.27□□□□□ -0.93
HMG20BQ9P0W2 FCRL2-205ENST00000469986 902 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
HMG20BQ9P0W2 AC120057.1-201ENST00000483947 663 ntBASIC9.27□□□□□ -0.93
HMG20BQ9P0W2 AMTN-202ENST00000504451 761 ntAPPRIS ALT1 TSL 1 (best) BASIC9.27□□□□□ -0.93
HMG20BQ9P0W2 OSTC-204ENST00000512478 663 ntTSL 5 BASIC9.27□□□□□ -0.93
Retrieved 100 of 98,524 protein–RNA pairs in 93.4 ms