RNA–Protein interactions for RNA: ENST00000446391.1

LINC00331-201, long intergenic non-protein coding RNA 331, humanhuman

TSL 5 BASIC

Gene LINC00331, Length 376 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00331-201ENST00000446391 AEBP2Q6ZN18 517 aaPredicted RBP29.5■■■□□ 2.31
LINC00331-201ENST00000446391 CHIC1Q5VXU3 224 aa29.01■■■□□ 2.23
LINC00331-201ENST00000446391 PHF23Q9BUL5 403 aaPredicted RBP25.46■■□□□ 1.67
LINC00331-201ENST00000446391 SENP3Q9H4L4 574 aaPredicted RBP25.13■■□□□ 1.61
LINC00331-201ENST00000446391 PLPPR3Q6T4P5 718 aa23.68■■□□□ 1.38
LINC00331-201ENST00000446391 FOXD1Q16676 465 aa23.23■■□□□ 1.31
LINC00331-201ENST00000446391 ADRA2BP18089 450 aa22.46■■□□□ 1.19
LINC00331-201ENST00000446391 PPP6R1Q9UPN7 881 aa22.42■■□□□ 1.18
LINC00331-201ENST00000446391 PIAS4Q8N2W9 510 aaPredicted RBP22.02■■□□□ 1.12
LINC00331-201ENST00000446391 MSH5O43196 834 aa21.46■■□□□ 1.03
LINC00331-201ENST00000446391 PPP4R3CPQ6ZMV5 832 aa20.85■□□□□ 0.93
LINC00331-201ENST00000446391 SCAF1Q9H7N4 1312 aaKnown RBP20.66■□□□□ 0.9
LINC00331-201ENST00000446391 KCNA4P22459 653 aa20.51■□□□□ 0.87
LINC00331-201ENST00000446391 NCBP3Q53F19 620 aaKnown RBP20.43■□□□□ 0.86
LINC00331-201ENST00000446391 MAPK8IP2Q13387 824 aaPredicted RBP20.31■□□□□ 0.84
LINC00331-201ENST00000446391 CNKSR2Q8WXI2 1034 aa20.26■□□□□ 0.83
LINC00331-201ENST00000446391 DMRT2Q9Y5R5 561 aa20.05■□□□□ 0.8
LINC00331-201ENST00000446391 NPM3O75607 178 aaKnown RBP20.03■□□□□ 0.8
LINC00331-201ENST00000446391 RNF216Q9NWF9 866 aaPredicted RBP19.81■□□□□ 0.76
LINC00331-201ENST00000446391 HOXD11P31277 338 aaPredicted RBP19.66■□□□□ 0.74
LINC00331-201ENST00000446391 SLC4A1APQ9BWU0 796 aaKnown RBP19.61■□□□□ 0.73
LINC00331-201ENST00000446391 DNAJC5BQ9UF47 199 aa19.37■□□□□ 0.69
LINC00331-201ENST00000446391 DCAF8L1A6NGE4 600 aa19.28■□□□□ 0.68
LINC00331-201ENST00000446391 POTEDQ86YR6 584 aa19.23■□□□□ 0.67
LINC00331-201ENST00000446391 EHMT2Q96KQ7 1210 aa19.23■□□□□ 0.67
LINC00331-201ENST00000446391 FOXD4L1Q9NU39 408 aa18.88■□□□□ 0.61
LINC00331-201ENST00000446391 CSRNP3Q8WYN3 585 aa18.85■□□□□ 0.61
LINC00331-201ENST00000446391 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.84■□□□□ 0.61
LINC00331-201ENST00000446391 SLC4A2P04920 1241 aa18.83■□□□□ 0.6
LINC00331-201ENST00000446391 ZBTB22O15209 634 aa18.82■□□□□ 0.6
LINC00331-201ENST00000446391 MYCNP04198 464 aaPredicted RBP18.57■□□□□ 0.56
LINC00331-201ENST00000446391 U3KPZ7 1027 aaPredicted RBP18.46■□□□□ 0.55
LINC00331-201ENST00000446391 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.4■□□□□ 0.54
LINC00331-201ENST00000446391 HNRNPUL2Q1KMD3 747 aaKnown RBP18.4■□□□□ 0.54
LINC00331-201ENST00000446391 RNF39Q9H2S5 420 aa18.34■□□□□ 0.53
LINC00331-201ENST00000446391 SAMD1Q6SPF0 538 aaPredicted RBP18.32■□□□□ 0.52
LINC00331-201ENST00000446391 ATXN8OSP0DMR3 200 aa18.21■□□□□ 0.51
LINC00331-201ENST00000446391 APLP2Q06481 763 aa18.21■□□□□ 0.51
LINC00331-201ENST00000446391 C1QBPQ07021 282 aaKnown RBP18.17■□□□□ 0.5
LINC00331-201ENST00000446391 ATF5Q9Y2D1 282 aaPredicted RBP17.96■□□□□ 0.47
LINC00331-201ENST00000446391 NISCHQ9Y2I1 1504 aa17.96■□□□□ 0.47
LINC00331-201ENST00000446391 CAPN15O75808 1086 aa17.92■□□□□ 0.46
LINC00331-201ENST00000446391 SPINK5Q9NQ38 1064 aaPredicted RBP17.9■□□□□ 0.46
LINC00331-201ENST00000446391 ZNF219Q9P2Y4 722 aaPredicted RBP17.87■□□□□ 0.45
LINC00331-201ENST00000446391 TRHP20396 242 aaPredicted RBP17.85■□□□□ 0.45
LINC00331-201ENST00000446391 CACNB1Q02641 598 aaPredicted RBP17.83■□□□□ 0.44
LINC00331-201ENST00000446391 POLA2Q14181 598 aa17.56■□□□□ 0.4
LINC00331-201ENST00000446391 ABCB7O75027 752 aa17.55■□□□□ 0.4
LINC00331-201ENST00000446391 DSG3P32926 999 aa17.5■□□□□ 0.39
LINC00331-201ENST00000446391 ZBTB12Q9Y330 459 aaPredicted RBP17.37■□□□□ 0.37
LINC00331-201ENST00000446391 FBLN2P98095 1184 aa17.35■□□□□ 0.37
LINC00331-201ENST00000446391 MKRN4PQ13434 485 aaPredicted RBP17.19■□□□□ 0.34
LINC00331-201ENST00000446391 FKBP8Q14318 412 aa17.12■□□□□ 0.33
LINC00331-201ENST00000446391 SPDYE4A6NLX3 237 aa16.97■□□□□ 0.31
LINC00331-201ENST00000446391 OSCARQ8IYS5 282 aa16.97■□□□□ 0.31
LINC00331-201ENST00000446391 SPDYE2BA6NHP3 402 aa16.85■□□□□ 0.29
LINC00331-201ENST00000446391 SPDYE6P0CI01 402 aa16.85■□□□□ 0.29
LINC00331-201ENST00000446391 SPDYE2Q495Y8 402 aa16.85■□□□□ 0.29
LINC00331-201ENST00000446391 ZNF692Q9BU19 519 aaPredicted RBP16.82■□□□□ 0.28
LINC00331-201ENST00000446391 RBM42Q9BTD8 480 aaKnown RBP16.77■□□□□ 0.28
LINC00331-201ENST00000446391 SSUH2Q9Y2M2 353 aa16.68■□□□□ 0.26
LINC00331-201ENST00000446391 PROM2Q8N271 834 aa16.61■□□□□ 0.25
LINC00331-201ENST00000446391 PABPN1Q86U42 306 aaKnown RBP eCLIP16.59■□□□□ 0.25
LINC00331-201ENST00000446391 AKT1S1Q96B36 256 aa16.54■□□□□ 0.24
LINC00331-201ENST00000446391 FBXO3Q9UK99 471 aa16.52■□□□□ 0.24
LINC00331-201ENST00000446391 STAG3Q9UJ98 1225 aa16.38■□□□□ 0.21
LINC00331-201ENST00000446391 REM2Q8IYK8 340 aaPredicted RBP16.36■□□□□ 0.21
LINC00331-201ENST00000446391 SPDYE1Q8NFV5 336 aaPredicted RBP16.34■□□□□ 0.21
LINC00331-201ENST00000446391 CLEC11AQ9Y240 323 aa16.27■□□□□ 0.2
LINC00331-201ENST00000446391 VASPP50552 380 aaPredicted RBP16.24■□□□□ 0.19
LINC00331-201ENST00000446391 PITPNM1O00562 1244 aa16.18■□□□□ 0.18
LINC00331-201ENST00000446391 PRR29P0C7W0 189 aa16.14■□□□□ 0.17
LINC00331-201ENST00000446391 PLCD3Q8N3E9 789 aa16.12■□□□□ 0.17
LINC00331-201ENST00000446391 PLEKHG5O94827 1062 aa16.11■□□□□ 0.17
LINC00331-201ENST00000446391 MIER1Q8N108 512 aa16.1■□□□□ 0.17
LINC00331-201ENST00000446391 KLHL34Q8N239 644 aa16■□□□□ 0.15
LINC00331-201ENST00000446391 CCDC180Q9P1Z9 1646 aa15.99■□□□□ 0.15
LINC00331-201ENST00000446391 CHRDL2Q6WN34 429 aa15.97■□□□□ 0.15
LINC00331-201ENST00000446391 IFNLR1Q8IU57 520 aaPredicted RBP15.97■□□□□ 0.15
LINC00331-201ENST00000446391 ZBTB47Q9UFB7 747 aaPredicted RBP15.96■□□□□ 0.15
LINC00331-201ENST00000446391 CREBZFQ9NS37 354 aa15.88■□□□□ 0.13
LINC00331-201ENST00000446391 AMER1Q5JTC6 1135 aaPredicted RBP15.87■□□□□ 0.13
LINC00331-201ENST00000446391 SPOCK2Q92563 424 aa15.84■□□□□ 0.13
LINC00331-201ENST00000446391 FXR2P51116 673 aaKnown RBP eCLIP15.82■□□□□ 0.12
LINC00331-201ENST00000446391 PRKAR2AP13861 404 aaKnown RBP15.8■□□□□ 0.12
LINC00331-201ENST00000446391 CHADLQ6NUI6 762 aa15.79■□□□□ 0.12
LINC00331-201ENST00000446391 PIP4P2Q8N4L2 257 aa15.77■□□□□ 0.12
LINC00331-201ENST00000446391 RTN4Q9NQC3 1192 aaKnown RBP15.75■□□□□ 0.11
LINC00331-201ENST00000446391 NPM1P06748 294 aaKnown RBP eCLIP15.73■□□□□ 0.11
LINC00331-201ENST00000446391 MNX1P50219 401 aaPredicted RBP15.69■□□□□ 0.1
LINC00331-201ENST00000446391 FARP1Q9Y4F1 1045 aaPredicted RBP15.68■□□□□ 0.1
LINC00331-201ENST00000446391 CIZ1Q9ULV3 898 aaPredicted RBP15.6■□□□□ 0.09
LINC00331-201ENST00000446391 NUBP1P53384 320 aa15.59■□□□□ 0.09
LINC00331-201ENST00000446391 FAM212AQ96EL1 285 aa15.57■□□□□ 0.08
LINC00331-201ENST00000446391 GSE1Q14687 1217 aa15.55■□□□□ 0.08
LINC00331-201ENST00000446391 DCAF8Q5TAQ9 597 aa15.54■□□□□ 0.08
LINC00331-201ENST00000446391 RASEFQ8IZ41 740 aa15.51■□□□□ 0.07
LINC00331-201ENST00000446391 PKD2Q13563 968 aa15.48■□□□□ 0.07
LINC00331-201ENST00000446391 PAK3O75914 559 aaPredicted RBP15.47■□□□□ 0.07
LINC00331-201ENST00000446391 ECM2O94769 699 aaPredicted RBP15.45■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 76.7 ms