Protein–RNA interactions for Protein: Q8IXQ3

C9orf40, Uncharacterized protein C9orf40, humanhuman

Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf40Q8IXQ3 MRPS21P1-201ENST00000453850 223 ntBASIC7.05□□□□□ -1.28
C9orf40Q8IXQ3 CMAHP-203ENST00000458373 1101 ntTSL 5 BASIC7.05□□□□□ -1.28
C9orf40Q8IXQ3 AC013787.1-201ENST00000460165 307 ntBASIC7.05□□□□□ -1.28
C9orf40Q8IXQ3 RN7SL91P-201ENST00000469313 291 ntBASIC7.05□□□□□ -1.28
C9orf40Q8IXQ3 SYNPR-208ENST00000472899 527 ntTSL 4 BASIC7.05□□□□□ -1.28
C9orf40Q8IXQ3 AC117383.2-201ENST00000514722 322 ntBASIC7.05□□□□□ -1.28
C9orf40Q8IXQ3 SCARNA20.1-201ENST00000516009 138 ntBASIC7.05□□□□□ -1.28
C9orf40Q8IXQ3 AP003119.2-201ENST00000528075 336 ntTSL 3 BASIC7.05□□□□□ -1.28
C9orf40Q8IXQ3 FXYD2-206ENST00000532119 562 ntAPPRIS P1 TSL 3 BASIC7.05□□□□□ -1.28
C9orf40Q8IXQ3 OR7E87P-201ENST00000532397 929 ntBASIC7.05□□□□□ -1.28
C9orf40Q8IXQ3 OR7E2P-201ENST00000533071 889 ntBASIC7.05□□□□□ -1.28
C9orf40Q8IXQ3 AC115676.1-201ENST00000538416 329 ntTSL 3 BASIC7.05□□□□□ -1.28
C9orf40Q8IXQ3 AC140118.1-201ENST00000539209 532 ntTSL 4 BASIC7.05□□□□□ -1.28
C9orf40Q8IXQ3 DAZAP2-208ENST00000549555 872 ntTSL 2 BASIC7.05□□□□□ -1.28
C9orf40Q8IXQ3 AC009117.3-201ENST00000568136 543 ntTSL 4 BASIC7.05□□□□□ -1.28
C9orf40Q8IXQ3 AC040162.2-201ENST00000573092 157 ntBASIC7.05□□□□□ -1.28
C9orf40Q8IXQ3 AC007861.1-201ENST00000576671 674 ntTSL 5 BASIC7.05□□□□□ -1.28
C9orf40Q8IXQ3 MIR4437-201ENST00000581331 60 ntBASIC7.05□□□□□ -1.28
C9orf40Q8IXQ3 TPGS2-204ENST00000587129 841 ntTSL 4 BASIC7.05□□□□□ -1.28
C9orf40Q8IXQ3 INTS6-AS1-218ENST00000598905 906 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
C9orf40Q8IXQ3 ANKRD20A19P-203ENST00000602724 295 ntBASIC7.05□□□□□ -1.28
C9orf40Q8IXQ3 AC103724.4-201ENST00000605981 292 ntBASIC7.05□□□□□ -1.28
C9orf40Q8IXQ3 AC244196.5-201ENST00000617347 406 ntAPPRIS P1 BASIC7.05□□□□□ -1.28
C9orf40Q8IXQ3 MECOM-208ENST00000468789 3691 ntAPPRIS P3 TSL 2 BASIC7.05□□□□□ -1.28
C9orf40Q8IXQ3 AC067968.1-201ENST00000591793 3766 ntAPPRIS P1 TSL 2 BASIC7.05□□□□□ -1.28
C9orf40Q8IXQ3 FANCM-201ENST00000267430 7111 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
C9orf40Q8IXQ3 FANCL-201ENST00000233741 1683 ntAPPRIS P3 TSL 1 (best) BASIC7.05□□□□□ -1.28
C9orf40Q8IXQ3 FANCL-202ENST00000402135 1698 ntAPPRIS ALT1 TSL 2 BASIC7.05□□□□□ -1.28
C9orf40Q8IXQ3 AC007620.2-201ENST00000600539 1697 ntTSL 5 BASIC7.05□□□□□ -1.28
C9orf40Q8IXQ3 CAP1-206ENST00000372805 2217 ntAPPRIS P3 TSL 1 (best) BASIC7.05□□□□□ -1.28
C9orf40Q8IXQ3 NCKAP1L-201ENST00000293373 9016 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
C9orf40Q8IXQ3 NAT10-201ENST00000257829 4002 ntAPPRIS P3 TSL 1 (best) BASIC7.05□□□□□ -1.28
C9orf40Q8IXQ3 TPD52-213ENST00000520527 2638 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
C9orf40Q8IXQ3 C7orf73-202ENST00000507606 2450 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
C9orf40Q8IXQ3 ZNF793-201ENST00000445217 6712 ntAPPRIS P1 TSL 5 BASIC7.05□□□□□ -1.28
C9orf40Q8IXQ3 PLCG2-201ENST00000359376 3819 ntTSL 5 BASIC7.05□□□□□ -1.28
C9orf40Q8IXQ3 IQCA1-204ENST00000409907 3281 ntAPPRIS P3 TSL 1 (best) BASIC7.05□□□□□ -1.28
C9orf40Q8IXQ3 CASK-204ENST00000378166 3123 ntAPPRIS P3 TSL 1 (best) BASIC7.05□□□□□ -1.28
C9orf40Q8IXQ3 OSBPL9-202ENST00000371714 3352 ntAPPRIS ALT1 TSL 2 BASIC7.05□□□□□ -1.28
C9orf40Q8IXQ3 PPARA-201ENST00000262735 9965 ntAPPRIS P1 TSL 5 BASIC7.05□□□□□ -1.28
C9orf40Q8IXQ3 RSPH4A-201ENST00000229554 2825 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
C9orf40Q8IXQ3 CRNKL1-207ENST00000536226 4009 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
C9orf40Q8IXQ3 AL354719.2-201ENST00000429530 1454 ntTSL 2 BASIC7.04□□□□□ -1.28
C9orf40Q8IXQ3 AC245505.2-201ENST00000553572 3055 ntBASIC7.04□□□□□ -1.28
C9orf40Q8IXQ3 AL591543.1-202ENST00000642095 4149 ntBASIC7.04□□□□□ -1.28
C9orf40Q8IXQ3 ST7-213ENST00000432298 1956 ntTSL 2 BASIC7.04□□□□□ -1.28
C9orf40Q8IXQ3 DIO2-AS1-201ENST00000553979 1597 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
C9orf40Q8IXQ3 PHF2P2-202ENST00000444553 2865 ntBASIC7.04□□□□□ -1.28
C9orf40Q8IXQ3 MAPK10-272ENST00000641110 2724 ntAPPRIS P2 BASIC7.04□□□□□ -1.28
C9orf40Q8IXQ3 PRLR-213ENST00000514088 1440 ntTSL 5 BASIC7.04□□□□□ -1.28
C9orf40Q8IXQ3 CEP41-203ENST00000343969 1087 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
C9orf40Q8IXQ3 RNU1-122P-201ENST00000365538 156 ntBASIC7.04□□□□□ -1.28
C9orf40Q8IXQ3 COQ3-202ENST00000369240 646 ntTSL 5 BASIC7.04□□□□□ -1.28
C9orf40Q8IXQ3 ISY1-202ENST00000393292 988 ntTSL 5 BASIC7.04□□□□□ -1.28
C9orf40Q8IXQ3 RPL7-203ENST00000396466 762 ntTSL 3 BASIC7.04□□□□□ -1.28
C9orf40Q8IXQ3 OR7E91P-201ENST00000400027 866 ntBASIC7.04□□□□□ -1.28
C9orf40Q8IXQ3 SRSF7-202ENST00000409276 1050 ntTSL 5 BASIC7.04□□□□□ -1.28
C9orf40Q8IXQ3 AC009237.9-201ENST00000414800 347 ntBASIC7.04□□□□□ -1.28
C9orf40Q8IXQ3 AC017104.2-201ENST00000417000 321 ntBASIC7.04□□□□□ -1.28
C9orf40Q8IXQ3 SNX18P14-201ENST00000429308 574 ntBASIC7.04□□□□□ -1.28
C9orf40Q8IXQ3 AL604028.1-201ENST00000430643 598 ntTSL 2 BASIC7.04□□□□□ -1.28
C9orf40Q8IXQ3 RPSAP62-201ENST00000432596 833 ntBASIC7.04□□□□□ -1.28
C9orf40Q8IXQ3 TAAR9-201ENST00000434551 1047 ntAPPRIS P1 BASIC7.04□□□□□ -1.28
C9orf40Q8IXQ3 AC016396.1-201ENST00000440189 328 ntTSL 3 BASIC7.04□□□□□ -1.28
C9orf40Q8IXQ3 LYPD6B-207ENST00000450639 484 ntAPPRIS ALT2 TSL 3 BASIC7.04□□□□□ -1.28
C9orf40Q8IXQ3 CHIAP1-201ENST00000456220 995 ntBASIC7.04□□□□□ -1.28
C9orf40Q8IXQ3 GRHL1-206ENST00000480736 572 ntTSL 4 BASIC7.04□□□□□ -1.28
C9orf40Q8IXQ3 L1TD1-201ENST00000498273 3849 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
C9orf40Q8IXQ3 AC233724.10-201ENST00000510454 409 ntBASIC7.04□□□□□ -1.28
C9orf40Q8IXQ3 OR7E83P-201ENST00000511021 970 ntBASIC7.04□□□□□ -1.28
C9orf40Q8IXQ3 LINC02223-203ENST00000514771 781 ntTSL 5 BASIC7.04□□□□□ -1.28
C9orf40Q8IXQ3 AC008676.1-202ENST00000520658 545 ntTSL 4 BASIC7.04□□□□□ -1.28
C9orf40Q8IXQ3 AP001372.3-201ENST00000530510 609 ntTSL 2 BASIC7.04□□□□□ -1.28
C9orf40Q8IXQ3 AL358334.3-201ENST00000557343 535 ntTSL 3 BASIC7.04□□□□□ -1.28
C9orf40Q8IXQ3 AC021755.3-201ENST00000560376 864 ntTSL 5 BASIC7.04□□□□□ -1.28
C9orf40Q8IXQ3 AC009063.2-201ENST00000563981 906 ntTSL 3 BASIC7.04□□□□□ -1.28
C9orf40Q8IXQ3 BMS1P8-201ENST00000565049 1178 ntBASIC7.04□□□□□ -1.28
C9orf40Q8IXQ3 CMC2-213ENST00000565914 528 ntAPPRIS P1 TSL 3 BASIC7.04□□□□□ -1.28
C9orf40Q8IXQ3 AC073529.1-202ENST00000608576 1080 ntTSL 5 BASIC7.04□□□□□ -1.28
C9orf40Q8IXQ3 Metazoa_SRP.167-201ENST00000614947 260 ntBASIC7.04□□□□□ -1.28
C9orf40Q8IXQ3 MIAT_exon1.1-201ENST00000617016 135 ntBASIC7.04□□□□□ -1.28
C9orf40Q8IXQ3 FOXJ3-205ENST00000372573 5309 ntAPPRIS P3 TSL 2 BASIC7.04□□□□□ -1.28
C9orf40Q8IXQ3 CACNB4-270ENST00000638040 2026 ntTSL 5 BASIC7.04□□□□□ -1.28
C9orf40Q8IXQ3 PPARGC1B-201ENST00000309241 10568 ntAPPRIS P3 TSL 1 (best) BASIC7.04□□□□□ -1.28
C9orf40Q8IXQ3 DRP2-202ENST00000395209 7277 ntAPPRIS P3 TSL 1 (best) BASIC7.04□□□□□ -1.28
C9orf40Q8IXQ3 FARSB-201ENST00000281828 3369 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
C9orf40Q8IXQ3 OR4F15-201ENST00000332238 2119 ntAPPRIS P1 BASIC7.04□□□□□ -1.28
C9orf40Q8IXQ3 IL16-204ENST00000394660 9616 ntAPPRIS ALT2 TSL 2 BASIC7.04□□□□□ -1.28
C9orf40Q8IXQ3 C7orf31-202ENST00000409280 3357 ntAPPRIS P1 TSL 2 BASIC7.04□□□□□ -1.28
C9orf40Q8IXQ3 LINC01653-201ENST00000456026 1728 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
C9orf40Q8IXQ3 USP47-203ENST00000399455 7396 ntAPPRIS ALT2 TSL 5 BASIC7.04□□□□□ -1.28
C9orf40Q8IXQ3 SMYD3-218ENST00000630181 1458 ntTSL 2 BASIC7.04□□□□□ -1.28
C9orf40Q8IXQ3 TRIM66-202ENST00000402157 10086 ntAPPRIS P5 TSL 5 BASIC7.04□□□□□ -1.28
C9orf40Q8IXQ3 RIPOR2-208ENST00000613507 5539 ntAPPRIS P4 TSL 5 BASIC7.04□□□□□ -1.28
C9orf40Q8IXQ3 HHLA2-201ENST00000357759 2666 ntAPPRIS P3 TSL 1 (best) BASIC7.04□□□□□ -1.28
C9orf40Q8IXQ3 BBX-207ENST00000416476 2178 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
C9orf40Q8IXQ3 TNFSF15-201ENST00000374044 2789 ntBASIC7.03□□□□□ -1.28
C9orf40Q8IXQ3 TNFAIP8-204ENST00000503646 2502 ntTSL 2 BASIC7.03□□□□□ -1.28
C9orf40Q8IXQ3 SPARC-201ENST00000231061 3701 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
C9orf40Q8IXQ3 ABCB4-202ENST00000358400 3826 ntTSL 5 BASIC7.03□□□□□ -1.28
Retrieved 100 of 98,524 protein–RNA pairs in 89.4 ms