Protein–RNA interactions for Protein: Q6P2Q9

PRPF8, Pre-mRNA-processing-splicing factor 8, humanhuman

Known RBP eCLIP

Length 2,335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8Q6P2Q9 PCNP-206ENST00000486406 742 ntTSL 26.27□□□□□ -1.412e-6■■□□□ 12.2
PRPF8Q6P2Q9 ALAD-201ENST00000409155 3173 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.636e-7■■□□□ 12.2
PRPF8Q6P2Q9 ALAD-208ENST00000482847 3247 ntTSL 28.63□□□□□ -1.036e-7■■□□□ 12.2
PRPF8Q6P2Q9 GFPT1-204ENST00000494201 625 ntTSL 56.24□□□□□ -1.412e-8■■□□□ 12.2
PRPF8Q6P2Q9 HPCAL1-204ENST00000422133 587 ntTSL 38.48□□□□□ -1.052e-6■■□□□ 12.2
PRPF8Q6P2Q9 ARRDC1-204ENST00000461627 882 ntTSL 217.75■□□□□ 0.435e-8■■□□□ 12.2
PRPF8Q6P2Q9 ANKRD52-203ENST00000548241 651 ntTSL 311.1□□□□□ -0.632e-6■■□□□ 12.2
PRPF8Q6P2Q9 ARHGAP4-209ENST00000422918 642 ntTSL 512.24□□□□□ -0.453e-14■■□□□ 12.2
PRPF8Q6P2Q9 BRD3-206ENST00000494743 507 ntTSL 39.77□□□□□ -0.855e-10■■□□□ 12.2
PRPF8Q6P2Q9 FNBP4-202ENST00000524696 481 ntTSL 310.34□□□□□ -0.758e-17■■□□□ 12.2
PRPF8Q6P2Q9 AKAP8L-212ENST00000596750 906 ntTSL 314.87□□□□□ -0.037e-16■■□□□ 12.2
PRPF8Q6P2Q9 KIAA0907-206ENST00000466713 911 ntTSL 1 (best)14.16□□□□□ -0.148e-7■■□□□ 12.2
PRPF8Q6P2Q9 ELL2-202ENST00000505584 730 ntTSL 21.96□□□□□ -2.13e-7■■□□□ 12.2
PRPF8Q6P2Q9 LDLR-213ENST00000560502 509 ntTSL 212.23□□□□□ -0.452e-7■■□□□ 12.2
PRPF8Q6P2Q9 GRB7-208ENST00000485182 879 ntTSL 213.88□□□□□ -0.192e-8■■□□□ 12.2
PRPF8Q6P2Q9 GRB7-209ENST00000577695 612 ntTSL 512.37□□□□□ -0.432e-8■■□□□ 12.2
PRPF8Q6P2Q9 CARD10-208ENST00000486118 546 ntTSL 416.45■□□□□ 0.221e-6■■□□□ 12.2
PRPF8Q6P2Q9 ABCC10-207ENST00000463024 4542 ntTSL 210.14□□□□□ -0.797e-7■■□□□ 12.2
PRPF8Q6P2Q9 FASN-212ENST00000637525 141 ntTSL 513.28□□□□□ -0.289e-37■■□□□ 12.2
PRPF8Q6P2Q9 TTC38-206ENST00000475467 479 ntTSL 310.87□□□□□ -0.674e-9■■□□□ 12.2
PRPF8Q6P2Q9 TTC38-207ENST00000629918 162 ntTSL 5 BASIC9.65□□□□□ -0.874e-9■■□□□ 12.2
PRPF8Q6P2Q9 ATP7B-209ENST00000483772 723 ntTSL 56.34□□□□□ -1.396e-12■■□□□ 12.2
PRPF8Q6P2Q9 GUK1-222ENST00000477206 589 ntTSL 214.77□□□□□ -0.059e-7■■□□□ 12.2
PRPF8Q6P2Q9 GUK1-217ENST00000465025 783 ntTSL 212.61□□□□□ -0.399e-7■■□□□ 12.2
PRPF8Q6P2Q9 STARD10-214ENST00000539138 511 ntTSL 314.48□□□□□ -0.096e-10■■□□□ 12.2
PRPF8Q6P2Q9 USP20-207ENST00000491731 821 ntTSL 211.09□□□□□ -0.633e-7■■□□□ 12.2
PRPF8Q6P2Q9 ATP7B-207ENST00000466629 463 ntTSL 212.02□□□□□ -0.494e-7■■□□□ 12.2
PRPF8Q6P2Q9 ASL-202ENST00000362000 928 ntTSL 217.55■□□□□ 0.47e-7■■□□□ 12.2
PRPF8Q6P2Q9 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC12.81□□□□□ -0.361e-6■■□□□ 12.2
PRPF8Q6P2Q9 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC12.65□□□□□ -0.381e-6■■□□□ 12.2
PRPF8Q6P2Q9 HDAC5-204ENST00000586802 3662 ntAPPRIS ALT2 TSL 1 (best) BASIC9.2□□□□□ -0.941e-6■■□□□ 12.2
PRPF8Q6P2Q9 RPL36-206ENST00000582380 542 ntTSL 515.44■□□□□ 0.062e-17■■□□□ 12.2
PRPF8Q6P2Q9 RPLP2-205ENST00000527517 646 ntTSL 29.27□□□□□ -0.929e-34■■□□□ 12.2
PRPF8Q6P2Q9 HLF-206ENST00000573020 414 ntTSL 46.47□□□□□ -1.379e-34■■□□□ 12.2
PRPF8Q6P2Q9 ARHGAP18-203ENST00000483367 460 ntTSL 34.58□□□□□ -1.689e-7■■□□□ 12.2
PRPF8Q6P2Q9 ARHGAP18-202ENST00000463225 464 ntTSL 32.92□□□□□ -1.949e-7■■□□□ 12.2
PRPF8Q6P2Q9 HAGH-209ENST00000567190 472 ntTSL 420.44■□□□□ 0.867e-7■■□□□ 12.2
PRPF8Q6P2Q9 HAGH-205ENST00000564518 513 ntTSL 218.23■□□□□ 0.517e-7■■□□□ 12.2
PRPF8Q6P2Q9 BAIAP2-207ENST00000571530 581 ntTSL 411.59□□□□□ -0.554e-7■■□□□ 12.2
PRPF8Q6P2Q9 BAIAP2-212ENST00000573017 574 ntTSL 48.2□□□□□ -1.14e-7■■□□□ 12.2
PRPF8Q6P2Q9 BAIAP2-211ENST00000572918 626 ntTSL 45.52□□□□□ -1.534e-7■■□□□ 12.2
PRPF8Q6P2Q9 PACSIN3-204ENST00000528201 864 ntTSL 320.47■□□□□ 0.874e-7■■□□□ 12.2
PRPF8Q6P2Q9 PACSIN3-207ENST00000530513 912 ntTSL 319.51■□□□□ 0.714e-7■■□□□ 12.2
PRPF8Q6P2Q9 SLC50A1-211ENST00000490276 778 ntTSL 316.66■□□□□ 0.264e-8■■□□□ 12.2
PRPF8Q6P2Q9 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC15.51■□□□□ 0.074e-8■■□□□ 12.2
PRPF8Q6P2Q9 SLC50A1-213ENST00000506037 928 ntTSL 214.35□□□□□ -0.114e-8■■□□□ 12.2
PRPF8Q6P2Q9 SLC50A1-210ENST00000488609 890 ntTSL 314.05□□□□□ -0.164e-8■■□□□ 12.2
PRPF8Q6P2Q9 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC13.82□□□□□ -0.24e-8■■□□□ 12.2
PRPF8Q6P2Q9 TPTE2P2-203ENST00000605936 1003 ntTSL 513.56□□□□□ -0.244e-8■■□□□ 12.2
PRPF8Q6P2Q9 SPTBN2-208ENST00000532902 573 ntTSL 213.28□□□□□ -0.284e-8■■□□□ 12.2
PRPF8Q6P2Q9 GPR89A-202ENST00000460277 1955 ntTSL 1 (best)12.88□□□□□ -0.354e-8■■□□□ 12.2
PRPF8Q6P2Q9 SLC50A1-205ENST00000465546 538 ntTSL 312.12□□□□□ -0.474e-8■■□□□ 12.2
PRPF8Q6P2Q9 SLC50A1-203ENST00000368404 1300 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.534e-8■■□□□ 12.2
PRPF8Q6P2Q9 SLC50A1-202ENST00000368401 1166 ntTSL 1 (best) BASIC11.69□□□□□ -0.544e-8■■□□□ 12.2
PRPF8Q6P2Q9 SPTBN2-204ENST00000529997 8085 ntTSL 5 BASIC11.47□□□□□ -0.574e-8■■□□□ 12.2
PRPF8Q6P2Q9 SPTBN2-209ENST00000533211 8128 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.614e-8■■□□□ 12.2
PRPF8Q6P2Q9 SPTBN2-201ENST00000309996 7866 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.634e-8■■□□□ 12.2
PRPF8Q6P2Q9 SLC50A1-214ENST00000622581 1245 ntTSL 5 BASIC10.73□□□□□ -0.694e-8■■□□□ 12.2
PRPF8Q6P2Q9 SLC50A1-204ENST00000368405 1003 ntTSL 210.11□□□□□ -0.794e-8■■□□□ 12.2
PRPF8Q6P2Q9 SPTBN2-210ENST00000611817 2890 ntTSL 2 BASIC10.06□□□□□ -0.84e-8■■□□□ 12.2
PRPF8Q6P2Q9 SLC50A1-206ENST00000475824 770 ntTSL 59.9□□□□□ -0.824e-8■■□□□ 12.2
PRPF8Q6P2Q9 GPR89A-201ENST00000313835 2120 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.934e-8■■□□□ 12.2
PRPF8Q6P2Q9 COQ4-203ENST00000461102 3127 ntTSL 29.15□□□□□ -0.948e-8■■□□□ 12.2
PRPF8Q6P2Q9 SPTBN2-211ENST00000617502 3498 ntTSL 5 BASIC9.14□□□□□ -0.954e-8■■□□□ 12.2
PRPF8Q6P2Q9 SLC50A1-212ENST00000490770 991 ntTSL 39.03□□□□□ -0.964e-8■■□□□ 12.2
PRPF8Q6P2Q9 GPR89A-203ENST00000462900 1527 ntTSL 2 BASIC5.96□□□□□ -1.454e-8■■□□□ 12.2
PRPF8Q6P2Q9 GPR89A-208ENST00000493684 2699 ntTSL 25.47□□□□□ -1.534e-8■■□□□ 12.2
PRPF8Q6P2Q9 GPR89A-213ENST00000534502 1644 ntTSL 2 BASIC5.43□□□□□ -1.544e-8■■□□□ 12.2
PRPF8Q6P2Q9 TPTE2P2-202ENST00000605924 2113 ntTSL 5 BASIC4.99□□□□□ -1.614e-8■■□□□ 12.2
PRPF8Q6P2Q9 GPR89A-204ENST00000465185 1906 ntTSL 24.68□□□□□ -1.664e-8■■□□□ 12.2
PRPF8Q6P2Q9 TRIT1-208ENST00000469476 773 ntTSL 53.89□□□□□ -1.793e-10■■□□□ 12.2
PRPF8Q6P2Q9 GPR89A-206ENST00000478703 662 ntTSL 53.5□□□□□ -1.854e-8■■□□□ 12.2
PRPF8Q6P2Q9 SRPK1-206ENST00000502969 370 ntTSL 32.26□□□□□ -2.054e-8■■□□□ 12.2
PRPF8Q6P2Q9 PITPNB-207ENST00000465179 629 ntTSL 21.55□□□□□ -2.164e-8■■□□□ 12.2
PRPF8Q6P2Q9 TRMT11-204ENST00000446681 657 ntTSL 311.21□□□□□ -0.613e-7■■□□□ 12.2
PRPF8Q6P2Q9 PACSIN2-210ENST00000453643 818 ntTSL 513.78□□□□□ -0.22e-7■■□□□ 12.2
PRPF8Q6P2Q9 PACSIN2-208ENST00000445706 511 ntTSL 510.87□□□□□ -0.672e-7■■□□□ 12.2
PRPF8Q6P2Q9 ARHGDIA-209ENST00000582309 628 ntTSL 214.44□□□□□ -0.16e-10■■□□□ 12.2
PRPF8Q6P2Q9 MAU2-207ENST00000587638 1111 ntTSL 29.43□□□□□ -0.96e-7■■□□□ 12.2
PRPF8Q6P2Q9 MAU2-208ENST00000587709 3751 ntTSL 28.93□□□□□ -0.986e-7■■□□□ 12.2
PRPF8Q6P2Q9 PHGDH-213ENST00000641272 758 nt14.49□□□□□ -0.098e-8■■□□□ 12.2
PRPF8Q6P2Q9 PHGDH-203ENST00000462324 767 ntTSL 510.72□□□□□ -0.698e-8■■□□□ 12.2
PRPF8Q6P2Q9 PHGDH-218ENST00000641491 986 nt10.46□□□□□ -0.738e-8■■□□□ 12.2
PRPF8Q6P2Q9 PHGDH-220ENST00000641570 1036 nt10.46□□□□□ -0.738e-8■■□□□ 12.2
PRPF8Q6P2Q9 PHGDH-222ENST00000641587 566 nt8.87□□□□□ -0.998e-8■■□□□ 12.2
PRPF8Q6P2Q9 PHGDH-212ENST00000641247 710 nt8.69□□□□□ -1.028e-8■■□□□ 12.2
PRPF8Q6P2Q9 PHGDH-215ENST00000641371 725 nt7.77□□□□□ -1.178e-8■■□□□ 12.2
PRPF8Q6P2Q9 PHGDH-206ENST00000493622 742 ntTSL 57.1□□□□□ -1.278e-8■■□□□ 12.2
PRPF8Q6P2Q9 SLC16A3-209ENST00000580098 859 ntTSL 216.43■□□□□ 0.228e-11■■□□□ 12.2
PRPF8Q6P2Q9 SLC16A3-210ENST00000580189 872 ntTSL 516.01■□□□□ 0.158e-11■■□□□ 12.2
PRPF8Q6P2Q9 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.138e-11■■□□□ 12.2
PRPF8Q6P2Q9 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.028e-11■■□□□ 12.2
PRPF8Q6P2Q9 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.028e-11■■□□□ 12.2
PRPF8Q6P2Q9 SLC16A3-215ENST00000582946 586 ntTSL 414.71□□□□□ -0.058e-11■■□□□ 12.2
PRPF8Q6P2Q9 SLC16A3-204ENST00000578522 535 ntTSL 414.48□□□□□ -0.098e-11■■□□□ 12.2
PRPF8Q6P2Q9 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.388e-11■■□□□ 12.2
PRPF8Q6P2Q9 PIM2-201ENST00000376509 2075 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.764e-7■■□□□ 12.2
PRPF8Q6P2Q9 CSNK1D-219ENST00000581660 611 ntTSL 512.76□□□□□ -0.374e-12■■□□□ 12.2
PRPF8Q6P2Q9 AGRN-202ENST00000419249 861 ntTSL 315.45■□□□□ 0.061e-9■■□□□ 12.2
PRPF8Q6P2Q9 PTPRS-209ENST00000591760 478 ntTSL 221.97■■□□□ 1.114e-7■■□□□ 12.2
Retrieved 100 of 73,762 protein–RNA pairs in 1135.3 ms