RNA–Protein interactions for RNA: ENST00000502969.1

SRPK1-206, Transcript of SRSF protein kinase 1, humanhuman

TSL 3

Gene SRPK1, Length 370 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPK1-206ENST00000502969 AEBP2Q6ZN18 517 aaPredicted RBP22.16■■□□□ 1.14
SRPK1-206ENST00000502969 CHIC1Q5VXU3 224 aa21.98■■□□□ 1.11
SRPK1-206ENST00000502969 PHF23Q9BUL5 403 aaPredicted RBP19.25■□□□□ 0.67
SRPK1-206ENST00000502969 SENP3Q9H4L4 574 aaPredicted RBP18.96■□□□□ 0.63
SRPK1-206ENST00000502969 PLPPR3Q6T4P5 718 aa18.05■□□□□ 0.48
SRPK1-206ENST00000502969 FOXD1Q16676 465 aa17.47■□□□□ 0.39
SRPK1-206ENST00000502969 ADRA2BP18089 450 aa16.95■□□□□ 0.3
SRPK1-206ENST00000502969 PPP6R1Q9UPN7 881 aa16.89■□□□□ 0.29
SRPK1-206ENST00000502969 PIAS4Q8N2W9 510 aaPredicted RBP16.6■□□□□ 0.25
SRPK1-206ENST00000502969 MSH5O43196 834 aa16.46■□□□□ 0.23
SRPK1-206ENST00000502969 POTEDQ86YR6 584 aa16.06■□□□□ 0.16
SRPK1-206ENST00000502969 PPP4R3CPQ6ZMV5 832 aa15.86■□□□□ 0.13
SRPK1-206ENST00000502969 SCAF1Q9H7N4 1312 aaKnown RBP15.72■□□□□ 0.11
SRPK1-206ENST00000502969 KCNA4P22459 653 aa15.72■□□□□ 0.11
SRPK1-206ENST00000502969 NCBP3Q53F19 620 aaKnown RBP15.65■□□□□ 0.1
SRPK1-206ENST00000502969 CNKSR2Q8WXI2 1034 aa15.42■□□□□ 0.06
SRPK1-206ENST00000502969 NPM3O75607 178 aaKnown RBP15.27■□□□□ 0.04
SRPK1-206ENST00000502969 MAPK8IP2Q13387 824 aaPredicted RBP15.27■□□□□ 0.04
SRPK1-206ENST00000502969 SLC4A1APQ9BWU0 796 aaKnown RBP15.11■□□□□ 0.01
SRPK1-206ENST00000502969 DMRT2Q9Y5R5 561 aa15.11■□□□□ 0.01
SRPK1-206ENST00000502969 RNF216Q9NWF9 866 aaPredicted RBP15.04■□□□□ -0
SRPK1-206ENST00000502969 EHMT2Q96KQ7 1210 aa14.94□□□□□ -0.02
SRPK1-206ENST00000502969 HOXD11P31277 338 aaPredicted RBP14.87□□□□□ -0.03
SRPK1-206ENST00000502969 DNAJC5BQ9UF47 199 aa14.8□□□□□ -0.04
SRPK1-206ENST00000502969 CSRNP3Q8WYN3 585 aa14.56□□□□□ -0.08
SRPK1-206ENST00000502969 DCAF8L1A6NGE4 600 aa14.54□□□□□ -0.08
SRPK1-206ENST00000502969 FOXD4L1Q9NU39 408 aa14.5□□□□□ -0.09
SRPK1-206ENST00000502969 ZBTB22O15209 634 aa14.4□□□□□ -0.1
SRPK1-206ENST00000502969 SLC4A2P04920 1241 aa14.3□□□□□ -0.12
SRPK1-206ENST00000502969 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.28□□□□□ -0.123e-11■■□□□ 12.9
SRPK1-206ENST00000502969 MYCNP04198 464 aaPredicted RBP14.19□□□□□ -0.14
SRPK1-206ENST00000502969 CACNB1Q02641 598 aaPredicted RBP14.14□□□□□ -0.15
SRPK1-206ENST00000502969 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.06□□□□□ -0.16
SRPK1-206ENST00000502969 HNRNPUL2Q1KMD3 747 aaKnown RBP14.06□□□□□ -0.16
SRPK1-206ENST00000502969 ATXN8OSP0DMR3 200 aa14□□□□□ -0.17
SRPK1-206ENST00000502969 SAMD1Q6SPF0 538 aaPredicted RBP13.99□□□□□ -0.17
SRPK1-206ENST00000502969 RNF39Q9H2S5 420 aa13.98□□□□□ -0.17
SRPK1-206ENST00000502969 U3KPZ7 1027 aaPredicted RBP13.97□□□□□ -0.17
SRPK1-206ENST00000502969 APLP2Q06481 763 aa13.91□□□□□ -0.18
SRPK1-206ENST00000502969 C1QBPQ07021 282 aaKnown RBP13.81□□□□□ -0.2
SRPK1-206ENST00000502969 ATF5Q9Y2D1 282 aaPredicted RBP13.63□□□□□ -0.23
SRPK1-206ENST00000502969 ZNF219Q9P2Y4 722 aaPredicted RBP13.58□□□□□ -0.24
SRPK1-206ENST00000502969 CAPN15O75808 1086 aa13.54□□□□□ -0.24
SRPK1-206ENST00000502969 TRHP20396 242 aaPredicted RBP13.51□□□□□ -0.25
SRPK1-206ENST00000502969 SPINK5Q9NQ38 1064 aaPredicted RBP13.48□□□□□ -0.25
SRPK1-206ENST00000502969 POLA2Q14181 598 aa13.31□□□□□ -0.28
SRPK1-206ENST00000502969 FBLN2P98095 1184 aa13.28□□□□□ -0.28
SRPK1-206ENST00000502969 FKBP8Q14318 412 aa13.25□□□□□ -0.29
SRPK1-206ENST00000502969 ZBTB12Q9Y330 459 aaPredicted RBP13.25□□□□□ -0.29
SRPK1-206ENST00000502969 ABCB7O75027 752 aa13.24□□□□□ -0.29
SRPK1-206ENST00000502969 DSG3P32926 999 aa13.16□□□□□ -0.3
SRPK1-206ENST00000502969 MKRN4PQ13434 485 aaPredicted RBP13.06□□□□□ -0.32
SRPK1-206ENST00000502969 SPDYE4A6NLX3 237 aa13.02□□□□□ -0.33
SRPK1-206ENST00000502969 OSCARQ8IYS5 282 aa12.85□□□□□ -0.35
SRPK1-206ENST00000502969 SPDYE2BA6NHP3 402 aa12.83□□□□□ -0.36
SRPK1-206ENST00000502969 SPDYE6P0CI01 402 aa12.83□□□□□ -0.36
SRPK1-206ENST00000502969 SPDYE2Q495Y8 402 aa12.83□□□□□ -0.36
SRPK1-206ENST00000502969 FBXO3Q9UK99 471 aa12.83□□□□□ -0.36
SRPK1-206ENST00000502969 ZNF692Q9BU19 519 aaPredicted RBP12.82□□□□□ -0.36
SRPK1-206ENST00000502969 PROM2Q8N271 834 aa12.75□□□□□ -0.37
SRPK1-206ENST00000502969 RBM42Q9BTD8 480 aaKnown RBP12.69□□□□□ -0.38
SRPK1-206ENST00000502969 SSUH2Q9Y2M2 353 aa12.69□□□□□ -0.38
SRPK1-206ENST00000502969 PABPN1Q86U42 306 aaKnown RBP eCLIP12.62□□□□□ -0.39
SRPK1-206ENST00000502969 POTEHQ6S545 545 aa12.6□□□□□ -0.39
SRPK1-206ENST00000502969 AMER1Q5JTC6 1135 aaPredicted RBP12.57□□□□□ -0.4
SRPK1-206ENST00000502969 STAG3Q9UJ98 1225 aa12.56□□□□□ -0.4
SRPK1-206ENST00000502969 VASPP50552 380 aaPredicted RBP12.54□□□□□ -0.4
SRPK1-206ENST00000502969 AKT1S1Q96B36 256 aa12.52□□□□□ -0.41
SRPK1-206ENST00000502969 PLEKHG5O94827 1062 aa12.42□□□□□ -0.42
SRPK1-206ENST00000502969 SPDYE1Q8NFV5 336 aaPredicted RBP12.42□□□□□ -0.42
SRPK1-206ENST00000502969 PLCD3Q8N3E9 789 aa12.4□□□□□ -0.42
SRPK1-206ENST00000502969 RTN4Q9NQC3 1192 aaKnown RBP12.4□□□□□ -0.42
SRPK1-206ENST00000502969 KLHL34Q8N239 644 aa12.35□□□□□ -0.43
SRPK1-206ENST00000502969 REM2Q8IYK8 340 aaPredicted RBP12.34□□□□□ -0.43
SRPK1-206ENST00000502969 MIER1Q8N108 512 aa12.34□□□□□ -0.43
SRPK1-206ENST00000502969 CLEC11AQ9Y240 323 aa12.33□□□□□ -0.44
SRPK1-206ENST00000502969 ZBTB47Q9UFB7 747 aaPredicted RBP12.32□□□□□ -0.44
SRPK1-206ENST00000502969 IFNLR1Q8IU57 520 aaPredicted RBP12.31□□□□□ -0.44
SRPK1-206ENST00000502969 PRR29P0C7W0 189 aa12.27□□□□□ -0.45
SRPK1-206ENST00000502969 CHRDL2Q6WN34 429 aa12.25□□□□□ -0.45
SRPK1-206ENST00000502969 SPOCK2Q92563 424 aa12.24□□□□□ -0.45
SRPK1-206ENST00000502969 PITPNM1O00562 1244 aa12.19□□□□□ -0.46
SRPK1-206ENST00000502969 CREBZFQ9NS37 354 aa12.06□□□□□ -0.48
SRPK1-206ENST00000502969 NPM1P06748 294 aaKnown RBP eCLIP12.03□□□□□ -0.48
SRPK1-206ENST00000502969 CIZ1Q9ULV3 898 aaPredicted RBP12.02□□□□□ -0.49
SRPK1-206ENST00000502969 DCAF8L2P0C7V8 631 aa11.98□□□□□ -0.49
SRPK1-206ENST00000502969 PKD2Q13563 968 aa11.98□□□□□ -0.49
SRPK1-206ENST00000502969 GSE1Q14687 1217 aa11.98□□□□□ -0.49
SRPK1-206ENST00000502969 ECM2O94769 699 aaPredicted RBP11.97□□□□□ -0.49
SRPK1-206ENST00000502969 TRIM41Q8WV44 630 aa11.97□□□□□ -0.49
SRPK1-206ENST00000502969 FAM212AQ96EL1 285 aa11.96□□□□□ -0.49
SRPK1-206ENST00000502969 PIP4P2Q8N4L2 257 aa11.93□□□□□ -0.5
SRPK1-206ENST00000502969 PRKAR2AP13861 404 aaKnown RBP11.92□□□□□ -0.5
SRPK1-206ENST00000502969 CHADLQ6NUI6 762 aa11.92□□□□□ -0.5
SRPK1-206ENST00000502969 MNX1P50219 401 aaPredicted RBP11.91□□□□□ -0.5
SRPK1-206ENST00000502969 FXR2P51116 673 aaKnown RBP eCLIP11.91□□□□□ -0.58e-6■□□□□ 10.6
SRPK1-206ENST00000502969 NUBP1P53384 320 aa11.91□□□□□ -0.5
SRPK1-206ENST00000502969 DCAF8Q5TAQ9 597 aa11.91□□□□□ -0.5
SRPK1-206ENST00000502969 FARP1Q9Y4F1 1045 aaPredicted RBP11.88□□□□□ -0.51
SRPK1-206ENST00000502969 PAK3O75914 559 aaPredicted RBP11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms